You are here

Home

KJC3_007108-T1, KJC3_007108-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007108-T1
Unique NameKJC3_007108-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1469247..1470910+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007108-T1 ID=KJC3_007108-T1|Name=KJC3_007108-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1664bp|location=Sequence derived from alignment at ch5:1469247..1470910+ (Aspergillus niger KJC3)
ATGCTGCGCGTCCTGATCGGTTCAGAAGACCTAAAGGCTGTTGCCGTTGA
GGAAAGCTTTAATGCGTCGAACTTTCGTTCCCATCTCTTCTTCCTAGACG
ACCGCGGATCACTCCCCCTTGCAAGATCCTCTACCTGGCAAGACACCACC
TCAAAGCTCCCTGTGATACATCTTGAAGGCGAACAGACACACCAACTTAT
GGAGAAAGACGAGCGCCTTTCTACACACTTCACCGGGATGACGAGCAACG
ACACGACGATGCAAACCCTGCCCCAGATAGGGTGCCCTTATTGTTATCCA
AGCTGTTACTCAGCCTTCGAATCTGGAAGAACCGCAGCAGCAGCACACGG
GTTTCACTTCCGACATGAAGGGCAGACTCATCATGATAACAAGCCACAAG
AAATGCACTTCATCAAAGTCGAGGATGGCAGCCAGTTCGAGGCTCTTGCT
GCCAATGCAGACGCCCCACAGACATCAATCGTCGATTGTGATCTTTATTC
TAGCGATGCTGCTTCTGATACATATCACCAGACCGATGATATCAATGACC
TCTTTGCGATCAGCGAGACCGCCTCATCCCTGATAGCAGAGGGGACAACA
CCACGCAGGGCACCCATAACCATCCTCGATGCATGTATATCTCAGGGAAG
TGAGCCTTCTCCTCATGAAGCGGAATGGACAAGCGCGGAAAATGTCGCAT
CATCTGTGTCCCCAAGGCCATGGCTTGAAATTCCAACACCAACTGCAGAT
AACATTCTTGCTGCAGTTAGCACATCGTATTCAATGATAGCTGCACAGGA
ACATCACGTATCAGACTCATTCAGTGAGGGTCCTGGTTACGATCGATCCT
TATGGGATACAGTGAATCTTTCGGGCGAGGCGCAGTTTTACGGAGAAATC
AACAGCGCATTGGCTCAGCTTGACGCGGCAAACATTCATTTGGATCCCTC
CATAGTCGAGAATGACGGTTCAAACGCTGCCCAGTCCCTGTTATTCCCGT
GGGCTTCGAAAAGGACTGATTGTCCAGCCATGCTTTCGATCGGAAGTGGG
CGTGCAGCCAGCCAAGGATGTAATGACGGTTCCTACCAGTACCATAAGTG
TCGTTATAGACTTAATGAGCCTTGGCCGCTACCGAATCCCAGTGACATAG
GCCCCATCAATCAGGGGAAGCTGCTTGGCAGGCCACTTACATGTCTCCGT
GACAAGAGAAACGCATTCTTGATTGAATGTAAGCTCCGTGGGTTGTCGTA
TAAGGATATCAAAAGGATTGGCGGGTTCAAGGAGGCCGAGTCGACTCTCC
GTGGCAGATTCCGCACGTTGACAAAGTCTAAGGAGCAACGCGTGAGGAAG
CCACAATGGCATCAAAACGACGTAAGTCACCTGTCCCGGTTGCTCCAACT
TTCCTCCTGGTGGTTCTTGAAAAGAAAAATGGGTACTGATCACTGTAGAT
TCGCCTTCTTTGTGAGGCGGTAAACGTGTTGTCGGAAGCCACGGACCAGG
AACATGGCCATTACTCCTTCTGCTGGGCCCAGATTGACAACCAATTACCA
AAGGTTTCTTGGAAGAGGGTGGCTCAGTACATCAGGACCCATGGGGGGTC
CTATCATTTCGGGAATGCAACCTGCAAGAAGAAGTGGTGCGAAGTCCATG
GCGTGAAGATCTAA
back to top

Coding sequence (CDS) from alignment at ch5:1469247..1470910+

>KJC3_007108-T1 ID=KJC3_007108-T1|Name=KJC3_007108-T1|organism=Aspergillus niger KJC3|type=CDS|length=3174bp|location=Sequence derived from alignment at ch5:1469247..1470910+ (Aspergillus niger KJC3)
ATGCTGCGCGTCCTGATCGGTTCAGAAGACCTAAAGGCTGTTGCCGTTGA
GGAAAGCTTTAATGCGTCGAACTTTCGTTCCCATCTCTTCTTCCTAGACG
ACCGCGGATCACTCCCCCTTGCAAGATCCTCTACCTGGCAAGACACCACC
TCAAAGCTCCCTGTGATACATCTTGAAGGCGAACAGACACACCAACTTAT
GGAGAAAGACGAGCGCCTTTCTACACACTTCACCGGGATGACGAGCAACG
ACACGACGATGCAAACCCTGCCCCAGATAGGGTGCCCTTATTGTTATCCA
AGCTGTTACTCAGCCTTCGAATCTGGAAGAACCGCAGCAGCAGCACACGG
GTTTCACTTCCGACATGAAGGGCAGACTCATCATGATAACAAGCCACAAG
AAATGCACTTCATCAAAGTCGAGGATGGCAGCCAGTTCGAGGCTCTTGCT
GCCAATGCAGACGCCCCACAGACATCAATCGTCGATTGTGATCTTTATTC
TAGCGATGCTGCTTCTGATACATATCACCAGACCGATGATATCAATGACC
TCTTTGCGATCAGCGAGACCGCCTCATCCCTGATAGCAGAGGGGACAACA
CCACGCAGGGCACCCATAACCATCCTCGATGCATGTATATCTCAGGGAAG
TGAGCCTTCTCCTCATGAAGCGGAATGGACAAGCGCGGAAAATGTCGCAT
CATCTGTGTCCCCAAGGCCATGGCTTGAAATTCCAACACCAACTGCAGAT
AACATTCTTGCTGCAGTTAGCACATCGTATTCAATGATAGCTGCACAGGA
ACATCACGTATCAGACTCATTCAGTGAGGGTCCTGGTTACGATCGATCCT
TATGGGATACAGTGAATCTTTCGGGCGAGGCGCAGTTTTACGGAGAAATC
AACAGCGCATTGGCTCAGCTTGACGCGGCAAACATTCATTTGGATCCCTC
CATAGTCGAGAATGACGGTTCAAACGCTGCCCAGTCCCTGTTATTCCCGT
GGGCTTCGAAAAGGACTGATTGTCCAGCCATGCTTTCGATCGGAAGTGGG
CGTGCAGCCAGCCAAGGATGTAATGACGGTTCCTACCAGTACCATAAGTG
TCGTTATAGACTTAATGAGCCTTGGCCGCTACCGAATCCCAGTGACATAG
GCCCCATCAATCAGGGGAAGCTGCTTGGCAGGCCACTTACATGTCTCCGT
GACAAGAGAAACGCATTCTTGATTGAATGTAAGCTCCGTGGGTTGTCGTA
TAAGGATATCAAAAGGATTGGCGGGTTCAAGGAGGCCGAGTCGACTCTCC
GTGGCAGATTCCGCACGTTGACAAAGTCTAAGGAGCAACGCGTGAGGAAG
CCACAATGGCATCAAAACGACATTCGCCTTCTTTGTGAGGCGGTAAACGT
GTTGTCGGAAGCCACGGACCAGGAACATGGCCATTACTCCTTCTGCTGGG
CCCAGATTGACAACCAATTACCAAAGGTTTCTTGGAAGAGGGTGGCTCAG
TACATCAGGACCCATGGGGGGTCCTATCATTTCGGGAATGCAACCTGCAA
GAAGAAGTGGTGCGAAGTCCATGGCGTGAAGATCTAAATGCTGCGCGTCC
TGATCGGTTCAGAAGACCTAAAGGCTGTTGCCGTTGAGGAAAGCTTTAAT
GCGTCGAACTTTCGTTCCCATCTCTTCTTCCTAGACGACCGCGGATCACT
CCCCCTTGCAAGATCCTCTACCTGGCAAGACACCACCTCAAAGCTCCCTG
TGATACATCTTGAAGGCGAACAGACACACCAACTTATGGAGAAAGACGAG
CGCCTTTCTACACACTTCACCGGGATGACGAGCAACGACACGACGATGCA
AACCCTGCCCCAGATAGGGTGCCCTTATTGTTATCCAAGCTGTTACTCAG
CCTTCGAATCTGGAAGAACCGCAGCAGCAGCACACGGGTTTCACTTCCGA
CATGAAGGGCAGACTCATCATGATAACAAGCCACAAGAAATGCACTTCAT
CAAAGTCGAGGATGGCAGCCAGTTCGAGGCTCTTGCTGCCAATGCAGACG
CCCCACAGACATCAATCGTCGATTGTGATCTTTATTCTAGCGATGCTGCT
TCTGATACATATCACCAGACCGATGATATCAATGACCTCTTTGCGATCAG
CGAGACCGCCTCATCCCTGATAGCAGAGGGGACAACACCACGCAGGGCAC
CCATAACCATCCTCGATGCATGTATATCTCAGGGAAGTGAGCCTTCTCCT
CATGAAGCGGAATGGACAAGCGCGGAAAATGTCGCATCATCTGTGTCCCC
AAGGCCATGGCTTGAAATTCCAACACCAACTGCAGATAACATTCTTGCTG
CAGTTAGCACATCGTATTCAATGATAGCTGCACAGGAACATCACGTATCA
GACTCATTCAGTGAGGGTCCTGGTTACGATCGATCCTTATGGGATACAGT
GAATCTTTCGGGCGAGGCGCAGTTTTACGGAGAAATCAACAGCGCATTGG
CTCAGCTTGACGCGGCAAACATTCATTTGGATCCCTCCATAGTCGAGAAT
GACGGTTCAAACGCTGCCCAGTCCCTGTTATTCCCGTGGGCTTCGAAAAG
GACTGATTGTCCAGCCATGCTTTCGATCGGAAGTGGGCGTGCAGCCAGCC
AAGGATGTAATGACGGTTCCTACCAGTACCATAAGTGTCGTTATAGACTT
AATGAGCCTTGGCCGCTACCGAATCCCAGTGACATAGGCCCCATCAATCA
GGGGAAGCTGCTTGGCAGGCCACTTACATGTCTCCGTGACAAGAGAAACG
CATTCTTGATTGAATGTAAGCTCCGTGGGTTGTCGTATAAGGATATCAAA
AGGATTGGCGGGTTCAAGGAGGCCGAGTCGACTCTCCGTGGCAGATTCCG
CACGTTGACAAAGTCTAAGGAGCAACGCGTGAGGAAGCCACAATGGCATC
AAAACGACATTCGCCTTCTTTGTGAGGCGGTAAACGTGTTGTCGGAAGCC
ACGGACCAGGAACATGGCCATTACTCCTTCTGCTGGGCCCAGATTGACAA
CCAATTACCAAAGGTTTCTTGGAAGAGGGTGGCTCAGTACATCAGGACCC
ATGGGGGGTCCTATCATTTCGGGAATGCAACCTGCAAGAAGAAGTGGTGC
GAAGTCCATGGCGTGAAGATCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007108KJC3_007108Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007108-T1.exon1KJC3_007108-T1.exon1Aspergillus niger KJC3exon
KJC3_007108-T1.exon2KJC3_007108-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007108-T1.cdsKJC3_007108-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007108-T1KJC3_007108-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1469247..1470910 +
Powered by Drupal