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KJC3_007121-T1, KJC3_007121-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007121-T1
Unique NameKJC3_007121-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1506015..1508310-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007121-T1 ID=KJC3_007121-T1|Name=KJC3_007121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2296bp|location=Sequence derived from alignment at ch5:1506015..1508310- (Aspergillus niger KJC3)
AACTGACTGCGACATCCTGCAAATCCCTTCTGACATTCAAATTTACATCA
TCTGCAGAACAGGTTGGGTATCACAAATGGGAGATTTACTGACTAGATGA
TTGAGTTACTACTAGTTAACTAGATAACTACGGAATACCCACCGTGCTGA
GCAGCTCCGTCTTCAAGCTTATCTTTAGTGACAACGATAGCGCCAACGGC
GGGCTGGATCTAGCCCTGCTAGTCTTGAAACAAGTTTTGGTCTGCAACTA
AAAAGCACGCGCCAGTATTAACGTCTGCATGCCTCTGACAGGCGCTTCTA
CGAGTTGCTTGTTACACACTCATCCACGCACAAGGGTAATATGATGGTCC
GCATCGCATGTCAGCCTGCGACGGTCTGCATGGGCGACCCAATGCATGGA
GGATATGTTACACAGGGTCTAGATTTGTCCTACGAACCCTCAGGGACTAG
AAGTATTGCAGGCTTATAATTAGAAACGAGCCAGGTGAAATGAACGCATA
TTTCCAGGTACCTTCGGTCTACTTTCTCTCCCTGTCAGGGGGCTGAGGTC
CAACCATGGGTTAGGGGCCGCAACCCTGGCGAGGTGACATGAATAATGCA
AACAAGCTTCGACGTAATTTTCACATAATTCGCATCTCTGCTACTTTTAC
TACAGAGTATTCTGAGCAATGCCAATAAATAGACAGTCGATGGAGAAGCT
CGCCATTTTTCATGCTCGCTTCGTTATTCCTTGTGCTTCGATCTTTGTTG
ACCTCTGCTGACGACATAGTAAAACGCTCAACGTACAGAGTAAGATATTC
ATAGCCACCATAACAGTAACCAGGGAAAAGTGTTGTCTCACAACGGATCA
AAACTCTCACGGCTACACGATGTGTTCTGTTAATCTGCGAAATATAAAAA
AAAAAAAAAATTCCACCGATCTAGAACCCCTTCCAGTTCCAACTGGTGAG
TCTTGACAGCCCTACCCGTAAAAAGCAGTGTTTCAATACGGACAACCCGG
ATCCACCATCCCGACCCGATGGAACAACAATTTACTACTCCAACTGCGGC
CACCAAATTCATCCTGCATGTCCACTTCCAACCAATATCCTTGACCCTGT
AATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGAGC
TTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCATCT
TCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCCAG
CACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAAAA
GGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGGAG
TGTATGTGTCATCCATCACCACCACCAGCACCCTCTGGCAGTAGTTGAGC
CCTCGAGAACGGAAATAACAGCCGTATAACCAATCCACAGGGTATCCATC
CAAAGATGAGCTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATA
GGCTCGATGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTT
GGCGCACAACTGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACG
AACAGAACAGCGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAG
AATCGCAAATTCCAGCGTAAGTAGCTGACTTGTTTATTTGTTTCGGTCTT
AATGTTTTTGTGATTGATCAATCCACCATGCTGACAAGCTATGCAAGGTT
CAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGACGC
GGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCTTTGAAC
CGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCCTCC
GCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATGGTG
GTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGAGCT
GACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGGTCT
GTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGGTAC
GTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAACCAT
GTTTCTAGTATACCGCTGCAGTAGAAAGATAGATCTTGATATAGAGTTGT
ACATAGATAGAAGTATTTGCTAGAATACTATAGTTGGTGGGTGAATGTTG
GTGACGCTGACTCTTCTTCTTATATATAGAGTGACCGGATATATTA
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Coding sequence (CDS) from alignment at ch5:1506015..1508310-

>KJC3_007121-T1 ID=KJC3_007121-T1|Name=KJC3_007121-T1|organism=Aspergillus niger KJC3|type=CDS|length=2709bp|location=Sequence derived from alignment at ch5:1506015..1508310- (Aspergillus niger KJC3)
GTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGAAGA
CGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCTTTG
AACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACAGCC
TCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAAATG
GTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACCGGA
GCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGACAGG
TCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGAAGG
TACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGAAAC
CATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGATGAGCTT
TCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGATGGGAG
CACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCACAACTGC
CCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAACAGCGG
CAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCAAATTCC
AGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAACGA
GCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATCCAT
CTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCCTCC
AGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCGAAA
AAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACTTGG
AGTGTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACGAGA
AGACGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAATGCT
TTGAACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGAACA
GCCTCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGTCAA
ATGGTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAAACC
GGAGCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTTGAC
AGGTCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGCAGA
AGGTACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTTGGA
AACCATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGATGAG
CTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGATGG
GAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCACAAC
TGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAACAG
CGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCAAAT
TCCAGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGAGAA
CGAGCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACAATC
CATCTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTATGCC
TCCAGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGGCCG
AAAAAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCTACT
TGGAGTGTTCAACGTCACGACAAATAGCCTCGACTGTGTCTCGAATTACG
AGAAGACGCGGTGGTTTTATGTCTTACGTGCTGAAAAGCCAGAGGGAAAT
GCTTTGAACCGTCTTCTTCGGCTGTCTAATCGAGCCCTGGCTCGGTTCGA
ACAGCCTCCGCTATACGAGTCGTCACAGGATGTGGCGGCTGTGCGGAAGT
CAAATGGTGGTGGTACGACACTGCCACGGGAATCGAGCGATTCTGGCCAA
ACCGGAGCTGACTACTCTCACTGCTTTCATATCTCGTTGGCGTGGAGCTT
GACAGGTCTGTCGTCTGCAGAGAGTGAGCTGATCGGAGGTGTGGATTTGC
AGAAGGTACGTGAGTTGAGTGTGCGGTTTGATTGTGTCAAGGTGAAAGTT
GGAAACCATGTTTCTAGTATACCGCTGCAGTAGGGTATCCATCCAAAGAT
GAGCTTTCTATTCTTAGCGATGTCATAGATCAGATCAATGATAGGCTCGA
TGGGAGCACGATTCAGCTCCACAGCCTACTACATAGTGATCTTGGCGCAC
AACTGCCCCTCCACATTAGTCTGTCTAGACCAGTCGTGCTACGAACAGAA
CAGCGGCAGTCATTCTTGGAGCTATTTCAGTCTCAGCTGAAAGAATCGCA
AATTCCAGCATGGCTCTGGTGCAATATTCTGAATCAGAATCCGAAGTAGA
GAACGAGCTTCCTCAGCGCCCAACAAAAAGGCCCCGTCAGGCCGCCAACA
ATCCATCTTCCTCACTCCCACCTTTACCTGCCGCTTTTCACGATCTCTAT
GCCTCCAGCACTCGCGTCAGCGTGACCGACGACCCCAGTCTCCACGGAGG
CCGAAAAAGGGTCATTCCCCATGTTGAAGGGAACTGGCCGACCCACATCT
ACTTGGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034477U6 snRNA 3'-end processing
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007121KJC3_007121Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007121-T1KJC3_007121-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007121-T1.cdsKJC3_007121-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007121-T1.utr3p1KJC3_007121-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007121-T1.exon4KJC3_007121-T1.exon4Aspergillus niger KJC3exon
KJC3_007121-T1.exon3KJC3_007121-T1.exon3Aspergillus niger KJC3exon
KJC3_007121-T1.exon2KJC3_007121-T1.exon2Aspergillus niger KJC3exon
KJC3_007121-T1.exon1KJC3_007121-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007121-T1.utr5p2KJC3_007121-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007121-T1.utr5p1KJC3_007121-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027521
DBxrefPFAM:PF09749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1506015..1508310 -
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