|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1521158..1522495- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007125-T1 ID=KJC3_007125-T1|Name=KJC3_007125-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1338bp|location=Sequence derived from alignment at ch5:1521158..1522495- (Aspergillus niger KJC3)
ATGATGGATGGTTCCATTCCGCCGCCGTCCACCACGACTACGACCACCTC
CACCCCCTCTACCACCACTATTCCAACTTCCTCTTCATCAACCGTTTTCC
GACCTCGCAAATCAGAGGATTGGAATGAGTATCGTACGGCCATCGAGAAT
CTCTACCGAGACAATCAGCTCAAGCTCCGCGATGTGAAGAGAATCATGGA
GCGTGACTATAACTTTGTTGCATCGTACAGCCTTCCATTTCTCTTTTTTA
CCATTCCTGCCCTGTTTCCTGCCTTTCCCTCTCTCCCTCGTATTTGTCAT
TCTGCCATTTACGGGCTTGCATTGCTTGTCCCTCTGCAGAAATGCTCTGT
TCCTTTCCTTTTACCTCCAAAAGCGGAAGAAGAGGACAGTGCGTCATTGT
TATTGATGTTGCTTTTTTCTTCTATTTCCCTTCCCTTCCCCACTCCTGGA
CAAATCAGCTTGGTTATAGGCTTCCCCTGACATTCAAACTTTCCAGAGAA
AAACAATACAAAGACCGCCTGGCTGCATGGCATGTCCGCAAGAATATCAA
GGCCAAAGAAGTCCATGTCATGATCCGAAAGCAGCAGAAACGAGCGGCCC
GAGGCAAGCAAACAGGTTTCCGTGTTGCTGGACAGGAAGTCGACTCCAAA
CGCATCTCCCGCTTTGTCCGTAGATATGGATCGAACATGGAGGCCAATAA
TGCCCGCGAGGATCCTCCGCACAGTCCTCAGGGCCATCAGATCATCCAGC
CCGTCCAACCCGTCCAGCCGATCCAGGCAACAAGTCCCGAACCAGGTAGG
ATACTCCCCATTCCGTCCCTAGTGCTGGGATTACTCATGTTAGCCGACAG
AAACTCCCTCCGATATGAGCTATTTTACCCCACCGCCAGAGGAACGAGCA
ATGACATTATCACCTTCTACAGAAACACCGTCACATTTCCGTGAGCCCCC
CATCCTTCTATTATTTCCCCCTTGCTATTCTACTATATGTCCTGGCCAGC
TATTTTGGTGGGAACCGTCAACAAGTAGTCGGGATGGTGGAAGATTTAAT
TGACTAGATAACCCAGATGACGACCCACCCGAACCAGTTCGTAATCCAGG
AATTGGCAGTGCACGATCTTTATCGGTCTCTTCCGGAACTATGACCAATG
ATATAACGAAACCCATGACTGACGGGGTCCAGGGACCAGATGGCTGGATG
ACCCTTGAGATGTTTCAGGAAAAGCTTTTGAAGCTTTCGAGGACACTCGA
TCAATCAATGTCCCGATTTGTGCCTGCCGAGGATCGCAGCCACCAGCCAT
CCAATACTGACCAGCATTCTCGCTCAATCGGGCAGTGA back to topCoding sequence (CDS) from alignment at ch5:1521158..1522495- >KJC3_007125-T1 ID=KJC3_007125-T1|Name=KJC3_007125-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch5:1521158..1522495- (Aspergillus niger KJC3)
ATGACGACCCACCCGAACCAGTTCGTAATCCAGGAATTGGCAGTGCACGA
TCTTTATCGGTCTCTTCCGGAACTATGACCAATGATATAACGAAACCCAT
GACTGACGGGGTCCAGGGACCAGATGGCTGGATGACCCTTGAGATGTTTC
AGGAAAAGCTTTTGAAGCTTTCGAGGACACTCGATCAATCAATGTCCCGA
TTTGTGCCTGCCGAGGATCGCAGCCACCAGCCATCCAATACTGACCAGCA
TTCTCGCTCAATCGGGCAGTGAAAACTCCCTCCGATATGAGCTATTTTAC
CCCACCGCCAGAGGAACGAGCAATGACATTATCACCTTCTACAGAAACAC
CGTCACATTTCCAGAAAAACAATACAAAGACCGCCTGGCTGCATGGCATG
TCCGCAAGAATATCAAGGCCAAAGAAGTCCATGTCATGATCCGAAAGCAG
CAGAAACGAGCGGCCCGAGGCAAGCAAACAGGTTTCCGTGTTGCTGGACA
GGAAGTCGACTCCAAACGCATCTCCCGCTTTGTCCGTAGATATGGATCGA
ACATGGAGGCCAATAATGCCCGCGAGGATCCTCCGCACAGTCCTCAGGGC
CATCAGATCATCCAGCCCGTCCAACCCGTCCAGCCGATCCAGGCAACAAG
TCCCGAACCAGATGATGGATGGTTCCATTCCGCCGCCGTCCACCACGACT
ACGACCACCTCCACCCCCTCTACCACCACTATTCCAACTTCCTCTTCATC
AACCGTTTTCCGACCTCGCAAATCAGAGGATTGGAATGAGTATCGTACGG
CCATCGAGAATCTCTACCGAGACAATCAGCTCAAGCTCCGCGATGTGAAG
AGAATCATGGAGCGTGACTATAACTTTGTTGCATCATGACGACCCACCCG
AACCAGTTCGTAATCCAGGAATTGGCAGTGCACGATCTTTATCGGTCTCT
TCCGGAACTATGACCAATGATATAACGAAACCCATGACTGACGGGGTCCA
GGGACCAGATGGCTGGATGACCCTTGAGATGTTTCAGGAAAAGCTTTTGA
AGCTTTCGAGGACACTCGATCAATCAATGTCCCGATTTGTGCCTGCCGAG
GATCGCAGCCACCAGCCATCCAATACTGACCAGCATTCTCGCTCAATCGG
GCAGTGAAAACTCCCTCCGATATGAGCTATTTTACCCCACCGCCAGAGGA
ACGAGCAATGACATTATCACCTTCTACAGAAACACCGTCACATTTCCAGA
AAAACAATACAAAGACCGCCTGGCTGCATGGCATGTCCGCAAGAATATCA
AGGCCAAAGAAGTCCATGTCATGATCCGAAAGCAGCAGAAACGAGCGGCC
CGAGGCAAGCAAACAGGTTTCCGTGTTGCTGGACAGGAAGTCGACTCCAA
ACGCATCTCCCGCTTTGTCCGTAGATATGGATCGAACATGGAGGCCAATA
ATGCCCGCGAGGATCCTCCGCACAGTCCTCAGGGCCATCAGATCATCCAG
CCCGTCCAACCCGTCCAGCCGATCCAGGCAACAAGTCCCGAACCAGATGA
TGGATGGTTCCATTCCGCCGCCGTCCACCACGACTACGACCACCTCCACC
CCCTCTACCACCACTATTCCAACTTCCTCTTCATCAACCGTTTTCCGACC
TCGCAAATCAGAGGATTGGAATGAGTATCGTACGGCCATCGAGAATCTCT
ACCGAGACAATCAGCTCAAGCTCCGCGATGTGAAGAGAATCATGGAGCGT
GACTATAACTTTGTTGCATCATGACGACCCACCCGAACCAGTTCGTAATC
CAGGAATTGGCAGTGCACGATCTTTATCGGTCTCTTCCGGAACTATGACC
AATGATATAACGAAACCCATGACTGACGGGGTCCAGGGACCAGATGGCTG
GATGACCCTTGAGATGTTTCAGGAAAAGCTTTTGAAGCTTTCGAGGACAC
TCGATCAATCAATGTCCCGATTTGTGCCTGCCGAGGATCGCAGCCACCAG
CCATCCAATACTGACCAGCATTCTCGCTCAATCGGGCAGTGAAAACTCCC
TCCGATATGAGCTATTTTACCCCACCGCCAGAGGAACGAGCAATGACATT
ATCACCTTCTACAGAAACACCGTCACATTTCCAGAAAAACAATACAAAGA
CCGCCTGGCTGCATGGCATGTCCGCAAGAATATCAAGGCCAAAGAAGTCC
ATGTCATGATCCGAAAGCAGCAGAAACGAGCGGCCCGAGGCAAGCAAACA
GGTTTCCGTGTTGCTGGACAGGAAGTCGACTCCAAACGCATCTCCCGCTT
TGTCCGTAGATATGGATCGAACATGGAGGCCAATAATGCCCGCGAGGATC
CTCCGCACAGTCCTCAGGGCCATCAGATCATCCAGCCCGTCCAACCCGTC
CAGCCGATCCAGGCAACAAGTCCCGAACCAGATGATGGATGGTTCCATTC
CGCCGCCGTCCACCACGACTACGACCACCTCCACCCCCTCTACCACCACT
ATTCCAACTTCCTCTTCATCAACCGTTTTCCGACCTCGCAAATCAGAGGA
TTGGAATGAGTATCGTACGGCCATCGAGAATCTCTACCGAGACAATCAGC
TCAAGCTCCGCGATGTGAAGAGAATCATGGAGCGTGACTATAACTTTGTT
GCATCATGACGACCCACCCGAACCAGTTCGTAATCCAGGAATTGGCAGTG
CACGATCTTTATCGGTCTCTTCCGGAACTATGACCAATGATATAACGAAA
CCCATGACTGACGGGGTCCAGGGACCAGATGGCTGGATGACCCTTGAGAT
GTTTCAGGAAAAGCTTTTGAAGCTTTCGAGGACACTCGATCAATCAATGT
CCCGATTTGTGCCTGCCGAGGATCGCAGCCACCAGCCATCCAATACTGAC
CAGCATTCTCGCTCAATCGGGCAGTGAAAACTCCCTCCGATATGAGCTAT
TTTACCCCACCGCCAGAGGAACGAGCAATGACATTATCACCTTCTACAGA
AACACCGTCACATTTCCAGAAAAACAATACAAAGACCGCCTGGCTGCATG
GCATGTCCGCAAGAATATCAAGGCCAAAGAAGTCCATGTCATGATCCGAA
AGCAGCAGAAACGAGCGGCCCGAGGCAAGCAAACAGGTTTCCGTGTTGCT
GGACAGGAAGTCGACTCCAAACGCATCTCCCGCTTTGTCCGTAGATATGG
ATCGAACATGGAGGCCAATAATGCCCGCGAGGATCCTCCGCACAGTCCTC
AGGGCCATCAGATCATCCAGCCCGTCCAACCCGTCCAGCCGATCCAGGCA
ACAAGTCCCGAACCAGATGATGGATGGTTCCATTCCGCCGCCGTCCACCA
CGACTACGACCACCTCCACCCCCTCTACCACCACTATTCCAACTTCCTCT
TCATCAACCGTTTTCCGACCTCGCAAATCAGAGGATTGGAATGAGTATCG
TACGGCCATCGAGAATCTCTACCGAGACAATCAGCTCAAGCTCCGCGATG
TGAAGAGAATCATGGAGCGTGACTATAACTTTGTTGCATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025676 |
| DBxref | PFAM:PF14420 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1521158..1522495 - |
|
