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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1540551..1542587- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007132-T1 ID=KJC3_007132-T1|Name=KJC3_007132-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2037bp|location=Sequence derived from alignment at ch5:1540551..1542587- (Aspergillus niger KJC3)
TACTTCTTCAACTCGAACTCCGCACGACTCTCTCGCCGAAGCAAGCACTT
CTCTCACCATTCTCCTTACAAGGAGAAGACCTCACCGATACACAATGGCT
GTGGTCACCGGTGCTCAACTGATCGCCCGATCGCTGCGCGATCTAGGCGT
GACCGTCATCTTCGGCATTGTTGGAATCCCTGTGGTCGAGATCGCCGAAG
AGGCCATCAACCTGGGCATTCGATTCGTGGCCTTTCGCAACGAACAGGCC
TGCAGCTATGCTGCCAGTGTCTATGGATACATGACCGGCCGACCGGGGGT
CTGTCTAGTTGTCGGAGGGCCGGGAGTTCTCCACGCGCTGGCCGGGGTAA
GCTTACTCCAGCTTCCTCTCCCCCGCTAGCCAGCTCTTGGCCATCGTGCT
AACTCCATACTATCGACTGAGAGCAGATCGGCAACTCCTCCGCAAACAAC
TTCCCATTGCTAGTCCTCGCCGGCTCTGCTGAGACCACCGGCGTCACTAA
AGGCGCCTTTCAGGAATTGGACGCCATCTCCCTTCTCACCCCTCACACCA
AGCTTGCTGTCCGCGCCTCCTCCCTCGACTTCATCCCCGGCGCCGTCAAG
AATGCCTACCGCACATGCTGGTACGGCCGCCCAGGCCCGACTTTCGTCGA
CCTCCCCGCCGACATCATCCAAGGCAAATCCTCCCCTGGATATCGTCTCC
CCCAGCCCGAGACTCTGCTCGTCCCCTCGCCCCCAAAGGCGGGCGGAGAC
CCAGCCCTGATCCTCAAGGCAGCGCAGTTGCTCCGCACCGCTCGCTCCCC
ACTCCTAGTGATAGGCAAAGGCGCCGCATACGCGCGCGCAGAGCTCGGGA
TTAACCAGCTCGTGGATCAGACCCAGATCCCATTTCTACCCACGCCCATG
GGCAAGGGCGTCGTGCCGGACTCGCACCCCTTGAACGCATCCAGCGCGCG
CAGCGCAGCCCTAAAGCACGCCGACGTCGTACTGATCCTGGGCGCGCGTC
TCAACTGGATCCTCCACTACGGCGAAGCACCCAAATGGAATCCAACGGCG
AAGATCATCCAGGTGGACATCTGCGCTGAAGAAATCGGCCGCAACGCCGG
GACAGCGGAGCTCGGAATCTTAGGAGACATCGGACTGGTCGTAGACCAAC
TGCTCTCTTCCCTCTCTAATTGGACATACTCCCCTAATCCATCATCCACC
AAAAACAACAAAGACACCTTCACATCCATCCTAACCACCTCCGCCAACCG
CAACGAACTCAAAGCCCAAACCGCCGCCCTCCGCCCCACCCCGCCAAACA
CTCCCCTCACCTACCAGCGCGCCTACCACATCATCAAATCCACCCTGAAC
ACCCTCTCTCCATTTGAACAAGGCAACATCATCTACGTCTCCGAAGGCGC
CAACACAATGGACATCTCCCGCTCCATCTTCCCACTCAACCATCCCCGCC
AACGCCTCGACGCAGGCACCTACGCCACGATGGGCGTGGGGATGGGGTAC
ATCGTCGCAGCGCATGAAGCATACAACGCTATCCCTTCACCCTCATCCAC
CAAACAAAAGAAAATAGTAGCCTTCGAAGGCGACAGCGCCTTCGGCTTCA
GCGCCATGGAAATCGAAACCCTAGCGCGGTACCGCATCCCCGCGCTTATC
TACGTGGTCAATAACTCGGGCATATATCATGGGGATTCGGTGAGTGAGGA
TGATTGGAGGGTGTTGCAGGGTCAGACGGTGGGGAATGATACGAAATCCG
AGTCTGGGTCTGAGAAGGGAAGTGGTGGAGGGACGAAGGGGTTACGCTCA
ACGAGTCTCCTCTATGAAACTAGATATGAGATGTTGGCGACGATGTGTGG
CGGGAAGGGATTCTTCGTTAGGACGGAGGAGGAGTTGGAGAGGGCGACGA
GGGAAGGGTTCGAGAGTGAGTGCGTTACGGTTGTCAATGTTATTGTGGAG
CCCGGGATTGGGAAGGAGATTGGGTTTGCGTGGCAGGGCAAGGGCAAGGG
GGATTCTTCTACTGGTGAAAGAGAGGTGAAGTTGTAG back to topCoding sequence (CDS) from alignment at ch5:1540551..1542587- >KJC3_007132-T1 ID=KJC3_007132-T1|Name=KJC3_007132-T1|organism=Aspergillus niger KJC3|type=CDS|length=3726bp|location=Sequence derived from alignment at ch5:1540551..1542587- (Aspergillus niger KJC3)
ATCGGCAACTCCTCCGCAAACAACTTCCCATTGCTAGTCCTCGCCGGCTC
TGCTGAGACCACCGGCGTCACTAAAGGCGCCTTTCAGGAATTGGACGCCA
TCTCCCTTCTCACCCCTCACACCAAGCTTGCTGTCCGCGCCTCCTCCCTC
GACTTCATCCCCGGCGCCGTCAAGAATGCCTACCGCACATGCTGGTACGG
CCGCCCAGGCCCGACTTTCGTCGACCTCCCCGCCGACATCATCCAAGGCA
AATCCTCCCCTGGATATCGTCTCCCCCAGCCCGAGACTCTGCTCGTCCCC
TCGCCCCCAAAGGCGGGCGGAGACCCAGCCCTGATCCTCAAGGCAGCGCA
GTTGCTCCGCACCGCTCGCTCCCCACTCCTAGTGATAGGCAAAGGCGCCG
CATACGCGCGCGCAGAGCTCGGGATTAACCAGCTCGTGGATCAGACCCAG
ATCCCATTTCTACCCACGCCCATGGGCAAGGGCGTCGTGCCGGACTCGCA
CCCCTTGAACGCATCCAGCGCGCGCAGCGCAGCCCTAAAGCACGCCGACG
TCGTACTGATCCTGGGCGCGCGTCTCAACTGGATCCTCCACTACGGCGAA
GCACCCAAATGGAATCCAACGGCGAAGATCATCCAGGTGGACATCTGCGC
TGAAGAAATCGGCCGCAACGCCGGGACAGCGGAGCTCGGAATCTTAGGAG
ACATCGGACTGGTCGTAGACCAACTGCTCTCTTCCCTCTCTAATTGGACA
TACTCCCCTAATCCATCATCCACCAAAAACAACAAAGACACCTTCACATC
CATCCTAACCACCTCCGCCAACCGCAACGAACTCAAAGCCCAAACCGCCG
CCCTCCGCCCCACCCCGCCAAACACTCCCCTCACCTACCAGCGCGCCTAC
CACATCATCAAATCCACCCTGAACACCCTCTCTCCATTTGAACAAGGCAA
CATCATCTACGTCTCCGAAGGCGCCAACACAATGGACATCTCCCGCTCCA
TCTTCCCACTCAACCATCCCCGCCAACGCCTCGACGCAGGCACCTACGCC
ACGATGGGCGTGGGGATGGGGTACATCGTCGCAGCGCATGAAGCATACAA
CGCTATCCCTTCACCCTCATCCACCAAACAAAAGAAAATAGTAGCCTTCG
AAGGCGACAGCGCCTTCGGCTTCAGCGCCATGGAAATCGAAACCCTAGCG
CGGTACCGCATCCCCGCGCTTATCTACGTGGTCAATAACTCGGGCATATA
TCATGGGGATTCGGTGAGTGAGGATGATTGGAGGGTGTTGCAGGGTCAGA
CGGTGGGGAATGATACGAAATCCGAGTCTGGGTCTGAGAAGGGAAGTGGT
GGAGGGACGAAGGGGTTACGCTCAACGAGTCTCCTCTATGAAACTAGATA
TGAGATGTTGGCGACGATGTGTGGCGGGAAGGGATTCTTCGTTAGGACGG
AGGAGGAGTTGGAGAGGGCGACGAGGGAAGGGTTCGAGAGTGAGTGCGTT
ACGGTTGTCAATGTTATTGTGGAGCCCGGGATTGGGAAGGAGATTGGGTT
TGCGTGGCAGGGCAAGGGCAAGGGGGATTCTTCTACTGGTGAAAGAGAGG
TGAAGTTGTAGATGGCTGTGGTCACCGGTGCTCAACTGATCGCCCGATCG
CTGCGCGATCTAGGCGTGACCGTCATCTTCGGCATTGTTGGAATCCCTGT
GGTCGAGATCGCCGAAGAGGCCATCAACCTGGGCATTCGATTCGTGGCCT
TTCGCAACGAACAGGCCTGCAGCTATGCTGCCAGTGTCTATGGATACATG
ACCGGCCGACCGGGGGTCTGTCTAGTTGTCGGAGGGCCGGGAGTTCTCCA
CGCGCTGGCCGGGATCGGCAACTCCTCCGCAAACAACTTCCCATTGCTAG
TCCTCGCCGGCTCTGCTGAGACCACCGGCGTCACTAAAGGCGCCTTTCAG
GAATTGGACGCCATCTCCCTTCTCACCCCTCACACCAAGCTTGCTGTCCG
CGCCTCCTCCCTCGACTTCATCCCCGGCGCCGTCAAGAATGCCTACCGCA
CATGCTGGTACGGCCGCCCAGGCCCGACTTTCGTCGACCTCCCCGCCGAC
ATCATCCAAGGCAAATCCTCCCCTGGATATCGTCTCCCCCAGCCCGAGAC
TCTGCTCGTCCCCTCGCCCCCAAAGGCGGGCGGAGACCCAGCCCTGATCC
TCAAGGCAGCGCAGTTGCTCCGCACCGCTCGCTCCCCACTCCTAGTGATA
GGCAAAGGCGCCGCATACGCGCGCGCAGAGCTCGGGATTAACCAGCTCGT
GGATCAGACCCAGATCCCATTTCTACCCACGCCCATGGGCAAGGGCGTCG
TGCCGGACTCGCACCCCTTGAACGCATCCAGCGCGCGCAGCGCAGCCCTA
AAGCACGCCGACGTCGTACTGATCCTGGGCGCGCGTCTCAACTGGATCCT
CCACTACGGCGAAGCACCCAAATGGAATCCAACGGCGAAGATCATCCAGG
TGGACATCTGCGCTGAAGAAATCGGCCGCAACGCCGGGACAGCGGAGCTC
GGAATCTTAGGAGACATCGGACTGGTCGTAGACCAACTGCTCTCTTCCCT
CTCTAATTGGACATACTCCCCTAATCCATCATCCACCAAAAACAACAAAG
ACACCTTCACATCCATCCTAACCACCTCCGCCAACCGCAACGAACTCAAA
GCCCAAACCGCCGCCCTCCGCCCCACCCCGCCAAACACTCCCCTCACCTA
CCAGCGCGCCTACCACATCATCAAATCCACCCTGAACACCCTCTCTCCAT
TTGAACAAGGCAACATCATCTACGTCTCCGAAGGCGCCAACACAATGGAC
ATCTCCCGCTCCATCTTCCCACTCAACCATCCCCGCCAACGCCTCGACGC
AGGCACCTACGCCACGATGGGCGTGGGGATGGGGTACATCGTCGCAGCGC
ATGAAGCATACAACGCTATCCCTTCACCCTCATCCACCAAACAAAAGAAA
ATAGTAGCCTTCGAAGGCGACAGCGCCTTCGGCTTCAGCGCCATGGAAAT
CGAAACCCTAGCGCGGTACCGCATCCCCGCGCTTATCTACGTGGTCAATA
ACTCGGGCATATATCATGGGGATTCGGTGAGTGAGGATGATTGGAGGGTG
TTGCAGGGTCAGACGGTGGGGAATGATACGAAATCCGAGTCTGGGTCTGA
GAAGGGAAGTGGTGGAGGGACGAAGGGGTTACGCTCAACGAGTCTCCTCT
ATGAAACTAGATATGAGATGTTGGCGACGATGTGTGGCGGGAAGGGATTC
TTCGTTAGGACGGAGGAGGAGTTGGAGAGGGCGACGAGGGAAGGGTTCGA
GAGTGAGTGCGTTACGGTTGTCAATGTTATTGTGGAGCCCGGGATTGGGA
AGGAGATTGGGTTTGCGTGGCAGGGCAAGGGCAAGGGGGATTCTTCTACT
GGTGAAAGAGAGGTGAAGTTGTAGATGGCTGTGGTCACCGGTGCTCAACT
GATCGCCCGATCGCTGCGCGATCTAGGCGTGACCGTCATCTTCGGCATTG
TTGGAATCCCTGTGGTCGAGATCGCCGAAGAGGCCATCAACCTGGGCATT
CGATTCGTGGCCTTTCGCAACGAACAGGCCTGCAGCTATGCTGCCAGTGT
CTATGGATACATGACCGGCCGACCGGGGGTCTGTCTAGTTGTCGGAGGGC
CGGGAGTTCTCCACGCGCTGGCCGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030976 | thiamine pyrophosphate binding |
| GO:0000287 | magnesium ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007132-T1.utr5p1 | KJC3_007132-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR029035 |
| DBxref | InterPro:IPR012001 |
| DBxref | InterPro:IPR011766 |
| DBxref | InterPro:IPR012000 |
| DBxref | PFAM:PF02776 |
| DBxref | PFAM:PF00205 |
| DBxref | PFAM:PF02775 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1540551..1542587 - |
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