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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1542747..1545241- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007133-T1 ID=KJC3_007133-T1|Name=KJC3_007133-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2495bp|location=Sequence derived from alignment at ch5:1542747..1545241- (Aspergillus niger KJC3)
CTGAAATCATCCGGTGATTCTGTATAGGAAGACTGGTATACTCCGTGACA
TTAATGACAGTCCACGTGACTGTCGGGGAGCCTCGGTATCTTTCCGATCG
GCAGCAGCGCCTCTCCGAAACCCCACGTTCGGCGCTCGAGCTGTTCTTCC
TCGGACAACTCGCATTTACATCTGCTTTATAATCAACCCTTCCAGATACT
CGACATCTTCGCTTCCACTCCTGCATTATTCATGATATAACTGAGACCCT
GACTGCTACGATCGTTACTACACACACAATGTCCTTCCTTGGTGGCGCCG
AGTGCTCGACGGCGGGCAATCCGTTGACTCAGTTCACCAAGCACGTCCAA
GATGATAAGTCCCTACAGAGAGATCGCCTCGTGGGGCGAGGCCCAGGAGG
CATGCAAGAAGGCATGCGGTCCCGGGGTATGATGGGAGGACAAGATCAGG
TACGAAGTGAACCCTTAACTATCAGAAATCATACATTCTCATCCAGTACT
AATGCCCGATTGGTAATCCTATCCAGATGATGGACGAATTCGCCCAACAA
CCCGGCCAGATCCCCGGTGCTCCCCCGCAACCGTTCGCTATGGAACAGCT
GCGACGCGAGCTAGATCAGTTCCAAACCACACCTCCGAGGACGGGCTCCC
CCGGCTGGGCGGCCGAGTTCGATGCGGGCGAGCATGCCCGGATGGAGGCT
GCGTTTGCCGGGCCCCAGGGCCCCATGATGAATAATGCGTCGGGATTTAC
GCCCGCGGAGTTTGCCCGGTTCCAGCAGCAGAGTCGGGCTGGCATGCCTC
AGACGGCTAACCATGTGGCGTCTGCCCCGTCGCCGATGATGGCTGGGTAC
CAGCGGCCCATGGGTATGGGAGGGTATATGGGCATGGGTGGAATGGGGAT
GATGCCGCAGACATTTAACCCGATGGCGATGCAGCAGCAGCCGGCAGAGG
CGACTACGCAGGACAAGGGCAAGGGACGCATGGTGGAGCTGGACGACGAG
AACTGGGAGGCACAGTTTGCCGAGATGGAGACGGCGGATACCCAGAAATT
GGACGATGAGGCCAACGCAGCTGTGGAGGCAGAGCTGAATGATCTGGATA
GGTCAGTCCCCCAAGATTCGGGCGATAGTGCCTTTGAAAGCGTGTGGCAA
CGGGTCCAAGCTGAGACCGCAACAAACAGGAAACTGGCCGAGGGCGAGAC
CGACTTTAACATTGACGACAATCTGCATATGGGTGAGATGGGCGAATGGG
ACGGATTCGATACGCTTAACACGCGCTTCCGGAACCCTCAACTAGGCGAT
TATATGTTCGAAGAAGATAACGTGTTCCGGAGCGTGAGCAATCCTTTCGA
AGAGGGAGTGAAGATCATGCGCGAGGGTGGAAACCTCTCCCTGGCTGCCT
TGGCTTTCGAGGCGGCAGTCCAGAAAGATCCTCAACATGTCCAGGCCTGG
ACCATGCTGGGATCGGCTCAGGCGCAGAACGAGAAGGAGCTTCCCGCCAT
CAGAGCGCTGGAGCAGGCACTTAAGATTGATGCTAACAATCTGGATGCGC
TGATGGGACTGGCTGTTTCCTACACCAACGAGGGCTATGACTCGACATCG
TACCGCACTTTGGAGCGTTGGCTGTCAGTCAAGTACCCCCAGATTATCAA
CCCTAATGATGTTTCATCGGAAGCCGACTTGGGCTTTACGGACCGCCAGC
TCCTGCACGACCGTGTCACCGATCTCTTCATCCAGGCTGCTCAGCTGTCG
CCATCTGGCGAGCAAATGGACCCGGACGTCCAGGTCGGTCTTGGCGTTCT
CTTCTACTGCGCAGAGGAGTATGACAAGGCGGTCGATTGCTTCTCTGCTG
CGTTGGCGTCCACGGAATCCGGAACGTCGAACCAACAGGAGCAGCTCCAC
CTGCTGTGGAACCGTCTGGGTGCTACGCTTGCCAACTCGGGTCGCTCCGA
GGAGGCGATCGAGGCCTACGAGCAGGCGCTGAACATCAATCCCAACTTCG
TCCGGGCACGGTACAACCTGGGTGTGTCGTGCATCAACATCGGCTGCTAC
CCAGAAGCCGCGCAACACCTGCTGGGAGCGCTATCGATGCACCGGGTGGT
TGAGCAGGAAGGTCGAGAGCGGGCACGTGAGATTGTTGGGGGCGAGGGTG
GCATTGACGACGAGCAGCTGGATCGCATGATTCATGTCAGCCAGAATCAG
AGTACCAACCTGTACGACACGTTGCGGCGAGTATTTAGCCAGATGGGACG
ACGCGATCTGGCTGATCAGGTGGTGGCGGGGATGGATGTCAATGTGTTCC
GACGGGAGTTTGAGTTCTAAGCTTAGTATAAGGGGGATATGATGGTCGTG
CTCAGCCTGGATTGCTGAGAGATGTTGTCTAGCTGGATGGAAGGGGATGT
TTTTGGATATGGATACCATATATGCTTGATTCTCTGCGGACTGGCGTCTA
CGGAGGGATGCCGTAATGAACAAAGATCATTGAGATATGCAGTGT back to topCoding sequence (CDS) from alignment at ch5:1542747..1545241- >KJC3_007133-T1 ID=KJC3_007133-T1|Name=KJC3_007133-T1|organism=Aspergillus niger KJC3|type=CDS|length=3930bp|location=Sequence derived from alignment at ch5:1542747..1545241- (Aspergillus niger KJC3)
ATGATGGACGAATTCGCCCAACAACCCGGCCAGATCCCCGGTGCTCCCCC
GCAACCGTTCGCTATGGAACAGCTGCGACGCGAGCTAGATCAGTTCCAAA
CCACACCTCCGAGGACGGGCTCCCCCGGCTGGGCGGCCGAGTTCGATGCG
GGCGAGCATGCCCGGATGGAGGCTGCGTTTGCCGGGCCCCAGGGCCCCAT
GATGAATAATGCGTCGGGATTTACGCCCGCGGAGTTTGCCCGGTTCCAGC
AGCAGAGTCGGGCTGGCATGCCTCAGACGGCTAACCATGTGGCGTCTGCC
CCGTCGCCGATGATGGCTGGGTACCAGCGGCCCATGGGTATGGGAGGGTA
TATGGGCATGGGTGGAATGGGGATGATGCCGCAGACATTTAACCCGATGG
CGATGCAGCAGCAGCCGGCAGAGGCGACTACGCAGGACAAGGGCAAGGGA
CGCATGGTGGAGCTGGACGACGAGAACTGGGAGGCACAGTTTGCCGAGAT
GGAGACGGCGGATACCCAGAAATTGGACGATGAGGCCAACGCAGCTGTGG
AGGCAGAGCTGAATGATCTGGATAGGTCAGTCCCCCAAGATTCGGGCGAT
AGTGCCTTTGAAAGCGTGTGGCAACGGGTCCAAGCTGAGACCGCAACAAA
CAGGAAACTGGCCGAGGGCGAGACCGACTTTAACATTGACGACAATCTGC
ATATGGGTGAGATGGGCGAATGGGACGGATTCGATACGCTTAACACGCGC
TTCCGGAACCCTCAACTAGGCGATTATATGTTCGAAGAAGATAACGTGTT
CCGGAGCGTGAGCAATCCTTTCGAAGAGGGAGTGAAGATCATGCGCGAGG
GTGGAAACCTCTCCCTGGCTGCCTTGGCTTTCGAGGCGGCAGTCCAGAAA
GATCCTCAACATGTCCAGGCCTGGACCATGCTGGGATCGGCTCAGGCGCA
GAACGAGAAGGAGCTTCCCGCCATCAGAGCGCTGGAGCAGGCACTTAAGA
TTGATGCTAACAATCTGGATGCGCTGATGGGACTGGCTGTTTCCTACACC
AACGAGGGCTATGACTCGACATCGTACCGCACTTTGGAGCGTTGGCTGTC
AGTCAAGTACCCCCAGATTATCAACCCTAATGATGTTTCATCGGAAGCCG
ACTTGGGCTTTACGGACCGCCAGCTCCTGCACGACCGTGTCACCGATCTC
TTCATCCAGGCTGCTCAGCTGTCGCCATCTGGCGAGCAAATGGACCCGGA
CGTCCAGGTCGGTCTTGGCGTTCTCTTCTACTGCGCAGAGGAGTATGACA
AGGCGGTCGATTGCTTCTCTGCTGCGTTGGCGTCCACGGAATCCGGAACG
TCGAACCAACAGGAGCAGCTCCACCTGCTGTGGAACCGTCTGGGTGCTAC
GCTTGCCAACTCGGGTCGCTCCGAGGAGGCGATCGAGGCCTACGAGCAGG
CGCTGAACATCAATCCCAACTTCGTCCGGGCACGGTACAACCTGGGTGTG
TCGTGCATCAACATCGGCTGCTACCCAGAAGCCGCGCAACACCTGCTGGG
AGCGCTATCGATGCACCGGGTGGTTGAGCAGGAAGGTCGAGAGCGGGCAC
GTGAGATTGTTGGGGGCGAGGGTGGCATTGACGACGAGCAGCTGGATCGC
ATGATTCATGTCAGCCAGAATCAGAGTACCAACCTGTACGACACGTTGCG
GCGAGTATTTAGCCAGATGGGACGACGCGATCTGGCTGATCAGGTGGTGG
CGGGGATGGATGTCAATGTGTTCCGACGGGAGTTTGAGTTCTAAATGTCC
TTCCTTGGTGGCGCCGAGTGCTCGACGGCGGGCAATCCGTTGACTCAGTT
CACCAAGCACGTCCAAGATGATAAGTCCCTACAGAGAGATCGCCTCGTGG
GGCGAGGCCCAGGAGGCATGCAAGAAGGCATGCGGTCCCGGGGTATGATG
GGAGGACAAGATCAGATGATGGACGAATTCGCCCAACAACCCGGCCAGAT
CCCCGGTGCTCCCCCGCAACCGTTCGCTATGGAACAGCTGCGACGCGAGC
TAGATCAGTTCCAAACCACACCTCCGAGGACGGGCTCCCCCGGCTGGGCG
GCCGAGTTCGATGCGGGCGAGCATGCCCGGATGGAGGCTGCGTTTGCCGG
GCCCCAGGGCCCCATGATGAATAATGCGTCGGGATTTACGCCCGCGGAGT
TTGCCCGGTTCCAGCAGCAGAGTCGGGCTGGCATGCCTCAGACGGCTAAC
CATGTGGCGTCTGCCCCGTCGCCGATGATGGCTGGGTACCAGCGGCCCAT
GGGTATGGGAGGGTATATGGGCATGGGTGGAATGGGGATGATGCCGCAGA
CATTTAACCCGATGGCGATGCAGCAGCAGCCGGCAGAGGCGACTACGCAG
GACAAGGGCAAGGGACGCATGGTGGAGCTGGACGACGAGAACTGGGAGGC
ACAGTTTGCCGAGATGGAGACGGCGGATACCCAGAAATTGGACGATGAGG
CCAACGCAGCTGTGGAGGCAGAGCTGAATGATCTGGATAGGTCAGTCCCC
CAAGATTCGGGCGATAGTGCCTTTGAAAGCGTGTGGCAACGGGTCCAAGC
TGAGACCGCAACAAACAGGAAACTGGCCGAGGGCGAGACCGACTTTAACA
TTGACGACAATCTGCATATGGGTGAGATGGGCGAATGGGACGGATTCGAT
ACGCTTAACACGCGCTTCCGGAACCCTCAACTAGGCGATTATATGTTCGA
AGAAGATAACGTGTTCCGGAGCGTGAGCAATCCTTTCGAAGAGGGAGTGA
AGATCATGCGCGAGGGTGGAAACCTCTCCCTGGCTGCCTTGGCTTTCGAG
GCGGCAGTCCAGAAAGATCCTCAACATGTCCAGGCCTGGACCATGCTGGG
ATCGGCTCAGGCGCAGAACGAGAAGGAGCTTCCCGCCATCAGAGCGCTGG
AGCAGGCACTTAAGATTGATGCTAACAATCTGGATGCGCTGATGGGACTG
GCTGTTTCCTACACCAACGAGGGCTATGACTCGACATCGTACCGCACTTT
GGAGCGTTGGCTGTCAGTCAAGTACCCCCAGATTATCAACCCTAATGATG
TTTCATCGGAAGCCGACTTGGGCTTTACGGACCGCCAGCTCCTGCACGAC
CGTGTCACCGATCTCTTCATCCAGGCTGCTCAGCTGTCGCCATCTGGCGA
GCAAATGGACCCGGACGTCCAGGTCGGTCTTGGCGTTCTCTTCTACTGCG
CAGAGGAGTATGACAAGGCGGTCGATTGCTTCTCTGCTGCGTTGGCGTCC
ACGGAATCCGGAACGTCGAACCAACAGGAGCAGCTCCACCTGCTGTGGAA
CCGTCTGGGTGCTACGCTTGCCAACTCGGGTCGCTCCGAGGAGGCGATCG
AGGCCTACGAGCAGGCGCTGAACATCAATCCCAACTTCGTCCGGGCACGG
TACAACCTGGGTGTGTCGTGCATCAACATCGGCTGCTACCCAGAAGCCGC
GCAACACCTGCTGGGAGCGCTATCGATGCACCGGGTGGTTGAGCAGGAAG
GTCGAGAGCGGGCACGTGAGATTGTTGGGGGCGAGGGTGGCATTGACGAC
GAGCAGCTGGATCGCATGATTCATGTCAGCCAGAATCAGAGTACCAACCT
GTACGACACGTTGCGGCGAGTATTTAGCCAGATGGGACGACGCGATCTGG
CTGATCAGGTGGTGGCGGGGATGGATGTCAATGTGTTCCGACGGGAGTTT
GAGTTCTAAATGTCCTTCCTTGGTGGCGCCGAGTGCTCGACGGCGGGCAA
TCCGTTGACTCAGTTCACCAAGCACGTCCAAGATGATAAGTCCCTACAGA
GAGATCGCCTCGTGGGGCGAGGCCCAGGAGGCATGCAAGAAGGCATGCGG
TCCCGGGGTATGATGGGAGGACAAGATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007133-T1.utr3p1 | KJC3_007133-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007133-T1.utr5p1 | KJC3_007133-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| DBxref | PFAM:PF13181 |
| DBxref | PFAM:PF13176 |
| DBxref | PFAM:PF07720 |
| DBxref | PFAM:PF07719 |
| DBxref | PFAM:PF13432 |
| DBxref | PFAM:PF13414 |
| DBxref | PFAM:PF00515 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1542747..1545241 - |
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