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KJC3_007157-T1, KJC3_007157-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007157-T1
Unique NameKJC3_007157-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1619515..1621230+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007157-T1 ID=KJC3_007157-T1|Name=KJC3_007157-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1716bp|location=Sequence derived from alignment at ch5:1619515..1621230+ (Aspergillus niger KJC3)
TGCCATATCTCACATCAATCTCACAGTCAACTTCTAGGCACCTCACCAAC
CCACCCATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATC
CTCCGCGAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCG
ACATCGTATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTAC
TTTCTTGACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCC
CATCCTCGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCC
AAATCAGCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACC
TCTGTCGAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTA
CGAAGCCGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCC
ACATCGACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTA
TGGATCCGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGC
GGAGGCTTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATC
ATGAGTTGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCT
CGCCGACGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGC
GGCGGGAGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTC
GGTGTGCGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCG
ACGTTGTATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCT
GGAGAAAATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGT
TCGCGCAGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCT
ACGGTGCTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAA
GCTTTACGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTC
AAGGGAGCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCG
AGGATGGTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGG
GATAATATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGC
AGTGGGATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCT
ACCAGCATTACCAATGCGTTTCCAGTGAGTACTATCATTTCAGTACAATT
GTGGTCTACAGTGAGCTAACATAAGAGTAGGAATTCGCAGCTGGACAGCC
AGCAGTGCATTGAGGGTATGGAACGATACACCATGAATCGGAAATTAGCT
AGCGACATGTTTGTTTCACAGGCGTAACGAGAATAAGTTGCGCAGAATGC
ATGATAAATGATACCATGTGAGTGATGGTCATTAGAAGCGTATGTCATAT
CGTGCGTCCAATGTACGTGGGTGAAGATCAGGAGCTGTATTTCTGTATCG
AGGGCAGTGCGTGGAGATACCCCGATAAAGTAAGTTGGCCATATCTCAAG
CCAAAGTGGCATCCAAGTCTGTGTACCCACGGGATGCCGAAGTGTCCCTC
TGTGTGTATGCAGAGAAACAAATCTATCTGCTGTGGCAGGTAGTAGGATG
CGCACGCGCAGGGATA
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Coding sequence (CDS) from alignment at ch5:1619515..1621230+

>KJC3_007157-T1 ID=KJC3_007157-T1|Name=KJC3_007157-T1|organism=Aspergillus niger KJC3|type=CDS|length=2502bp|location=Sequence derived from alignment at ch5:1619515..1621230+ (Aspergillus niger KJC3)
ATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCGC
GAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATCG
TATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCTT
GACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCCT
CGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATCA
GCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGTC
GAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAGC
CGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATCG
ACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGATC
CGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGGC
TTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAGT
TGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCGA
CGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGGG
AGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGTG
CGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTTG
TATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGAA
AATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCGC
AGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGTG
CTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAGCTTTA
CGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGGA
GCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGATG
GTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAAT
ATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGGG
ATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAGC
ATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATTG
AATGGCTTCCCAAAAAATCACCTCCGCCCTCGCGGAGATCGAATCCTCCG
CGAACCCCCAAAACAAGCTGCAGCTCTACAACAACCTCCTCAGCGACATC
GTATCGACGTCCACAGAACCCCAGATTTCTAGAGACCTAATTTACTTTCT
TGACTCCGTCCTCAGCGAAGACATCAGCATCGTCGCCGCCCGCCCCATCC
TCGACTCCTTCATCGTCGTCCTCCGCAAACTCACCCAAGAAACCCAAATC
AGCGTCGGCCAACACGCCATCACCCTCCTCCAATCCCGATCCACCTCTGT
CGAAGAACAAGACGCGCAGATCCGCGAGCTCCTCGCAGATGCCTACGAAG
CCGAAGGCCAGTACACCGACGCCGCAAAAGCCCTGCAGGGCATCCACATC
GACAGTTCGCAGCGTCTGGTCTCCGACGCAGCCAAGGTGCGGCTATGGAT
CCGGATTGTGAGATACTACCTCGAGGAAGACGATACCACAAGTGCGGAGG
CTTTCTTGAACCGCATCAAGAACCTACCGAGTAAGATCGAGGATCATGAG
TTGAAGCTACATTTCAAGCTATCCCAGGCTCGTATATTGGATGCTCGCCG
ACGCTTTCTCGATGCTAGTCAGGAATACTTCAATGTTAGCCTTGCGGCGG
GAGTGGATGAAGCGGATCGATTGCAGGCCTTGGCGGCTGCTATTCGGTGT
GCGGTGCTCGCTCCGGCCGGGCCGCAGCGGTCTCGGATCCTCGCGACGTT
GTATAAGGATGATCGGTCGACGTCGGTGGATGAGTTTGCTATCCTGGAGA
AAATGTTCCTGGATCGGTTGCTGACTCCAGAGGAGGTGGCTGCGTTCGCG
CAGCGGTTGGCGCCGCATCAGTTGGCTGTGACGGCTGATGGGTCTACGGT
GCTTGATAAGGCTGTTGTTGAACACAATTTGGTTGCGGCCAGCAAGCTTT
ACGAAAATATTACGACTGATGCGTTGGGTGCGATCCTGGGGCTTCAAGGG
AGCGGGGACTTCACGGCGGGGGAGAAGGCGGAAGATTATGCGGCGAGGAT
GGTCGAGCAGGGTCGATTGAAGGGGAGTATTGATCAGATTGACGGGATAA
TATACTTCGATGGAGGAAATGCGACTACAGGACAGCATATCCGGCAGTGG
GATGCTGGGGTGCAGGGTTTGGCCGAGGACGTGGAGAGAGTGGCTACCAG
CATTACCAATGCGTTTCCAGAATTCGCAGCTGGACAGCCAGCAGTGCATT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007157KJC3_007157Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007157-T1.utr5p1KJC3_007157-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007157-T1.exon1KJC3_007157-T1.exon1Aspergillus niger KJC3exon
KJC3_007157-T1.exon2KJC3_007157-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007157-T1.cdsKJC3_007157-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007157-T1.utr3p1KJC3_007157-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007157-T1KJC3_007157-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019585
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR000717
DBxrefPFAM:PF10602
DBxrefPFAM:PF01399
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1619515..1621230 +
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