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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1650243..1651496+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007166-T1 ID=KJC3_007166-T1|Name=KJC3_007166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1254bp|location=Sequence derived from alignment at ch5:1650243..1651496+ (Aspergillus niger KJC3)
CTCCGATAGTTATCTCCGCCGGAACCTAAATCTTATCCCCAGTTACTTAA
CTCCCATGTCGGACTTAGCGGACATAACCTTCATAGACGAATATACGAGT
AGTACTATTTCATTCATATTGCTCAATTATATATAGTACTAACCAGGAAT
GCGCCCCTGCTACAGTCACCACCACGAAACCAAAAAAGACCCCTTTCAAA
AAAACAATCCAACCTGAACAACCACCAAAAAAATGTCTCAATCAACCAAC
AACTTCATCTCCATCAACAAACTCACCAACACTCGCGTCCTCCTCATCGG
CGGAACCTCAGGCATCGGCTTCGTCGTCGCCCGCGCCGCCCTCGAACACG
GCGCCAACATCATCCTCTCCAGCTCCAACCCGGAGAGACTCGCCTCCGCT
ATATCCCGTCTGAAGACCCTCTACCCAGACCCATCCTTCACCTCCCGCAT
CACCGGCAAGGCATATGACCTAAGCGATGAATCTACCCTAGAGACCAATA
TCATCTCCTTACTCGACTACGCTACCTCTCCATCCATCTTCCCCAACACC
ACCACCAATACCGAAGGGAAAATCCTTCTAAACCACATATCCTACACCTC
CGGCACACGCCCCTCCCGCGCCCCCATCACCCCTACCTCCTCCCTCACGC
CCCAAACCTATACATCCAGCCAAACCCTCCGCGTCCTGGCCCCCCTCATG
CTGGGCAAACATGCCAAGACCTACATGGTGGATTCGCATACCTCGTCGTT
GACGTTCACGTCCGGCGTGTTGGCGAGTAAGCCGGTGGTGGGGACGACGT
TGAGTGCGATGGCGGGGAGTGCGCTGGGAGGGCTGGTCAGGGGACTGGCG
GTCGAGTTGGCGCCCATTAGGGCGAATGTTGTGGCACCGGGGGCGGTGGA
GACGGAGATTTTTGATGCTCTTGGGGGGCAGAAGGACATGTATATGGAGA
TGTTTAGGAAGGGGACGGTCTTGGGGAGGGTTGGAGCCCCGGAGGATGTG
GCGGAGGCGTATTTGTGGTGTATGAAGGATGGGTTTGTTACGGGGTTGTG
GGTGGGGAGTGATGGGGGGGCTTTACTTAAGTAGCTCATATAGTTCATAT
ACATGATATATGTATAGGGGGTGTGAGAGAGAGAGGGAGAGAGTTAGTAG
TCGGGGATGGTGGCATGGGTATGAGGGAGAGAGTTGTTGTTGATAGTAAG
ATTATGTTAGTATTCAGTTGATAGTTAGTGAGTATTATTGACATTGATTT
AGTG back to topCoding sequence (CDS) from alignment at ch5:1650243..1651496+ >KJC3_007166-T1 ID=KJC3_007166-T1|Name=KJC3_007166-T1|organism=Aspergillus niger KJC3|type=CDS|length=852bp|location=Sequence derived from alignment at ch5:1650243..1651496+ (Aspergillus niger KJC3)
ATGTCTCAATCAACCAACAACTTCATCTCCATCAACAAACTCACCAACAC
TCGCGTCCTCCTCATCGGCGGAACCTCAGGCATCGGCTTCGTCGTCGCCC
GCGCCGCCCTCGAACACGGCGCCAACATCATCCTCTCCAGCTCCAACCCG
GAGAGACTCGCCTCCGCTATATCCCGTCTGAAGACCCTCTACCCAGACCC
ATCCTTCACCTCCCGCATCACCGGCAAGGCATATGACCTAAGCGATGAAT
CTACCCTAGAGACCAATATCATCTCCTTACTCGACTACGCTACCTCTCCA
TCCATCTTCCCCAACACCACCACCAATACCGAAGGGAAAATCCTTCTAAA
CCACATATCCTACACCTCCGGCACACGCCCCTCCCGCGCCCCCATCACCC
CTACCTCCTCCCTCACGCCCCAAACCTATACATCCAGCCAAACCCTCCGC
GTCCTGGCCCCCCTCATGCTGGGCAAACATGCCAAGACCTACATGGTGGA
TTCGCATACCTCGTCGTTGACGTTCACGTCCGGCGTGTTGGCGAGTAAGC
CGGTGGTGGGGACGACGTTGAGTGCGATGGCGGGGAGTGCGCTGGGAGGG
CTGGTCAGGGGACTGGCGGTCGAGTTGGCGCCCATTAGGGCGAATGTTGT
GGCACCGGGGGCGGTGGAGACGGAGATTTTTGATGCTCTTGGGGGGCAGA
AGGACATGTATATGGAGATGTTTAGGAAGGGGACGGTCTTGGGGAGGGTT
GGAGCCCCGGAGGATGTGGCGGAGGCGTATTTGTGGTGTATGAAGGATGG
GTTTGTTACGGGGTTGTGGGTGGGGAGTGATGGGGGGGCTTTACTTAAGT
AG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007166-T1.utr5p1 | KJC3_007166-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007166-T1.utr3p1 | KJC3_007166-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1650243..1651496 + |
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