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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1774738..1776174- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007192-T1 ID=KJC3_007192-T1|Name=KJC3_007192-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1437bp|location=Sequence derived from alignment at ch5:1774738..1776174- (Aspergillus niger KJC3)
ATGCAGACTATCTTGGGAGTGACGATAGAGAGAGTCCTCCATAGGTATAC
TGCATATTACTATGGCGCGAGAACTGGAAGATAGGAAACCGAGGTTTACA
TGTTTAGTGATCTTAGTAGCAGATCCTCGGCCTTGCATTAAAGATAAAGG
GCAGCACAGTTCCAGGTTATTTTCCCTTATCAATTATCTTTGTCTCGATT
TGATTGCCTCAAAAGGTTGTCAGCCGCCCCAGTTCAAGTTCAAAGGTCAA
ACACCGACATAATGGAACAGGACAAGAAAGCGAACAATGACTTTGTGCCT
GTGTACAAAAGAACTGTTCAAGTGATAGTGATATCGATGGTTATTTTCTT
TGCTCCGTTATCATTCACATACTTCTTTGATGAGACACACACGTCCAACC
TGAGCGACAAAGTTCTGGCCATCCTAGTGAACCCTGAATTTGCGTATGGA
GAGGGCTCCGCGACTTTATCTGATATCAACGGAGGTCAAATGCGAATATT
TCTGCGAAATCTTACTGCGATGTTCTCTCACACGATTGCTGGTTCTATAG
CCATCGTCCTTGGCCTGCCCCAATTCAACACGACCCTGCAGTTCAGATAC
CCTGCGATCCATCGGTTTCTCGGGAGGCTATATATCCTATGCGCCTTAAC
AATCACCTGGTCTTCAAGAACCTTCTTAGCGGATGCTATGCCAAAACATG
AGGTTTTCTCCGGGGACCTCTTTGCATATATGCTATGGTCGTTATCACAT
GGTGTCCTGGGGACACTTGCCCTTGCAATATATGCCATTTGGAACCGTGA
CATTGGCTCTCATCGAGAATTTATGGTCCTGAATTATGCATTCATGCTGT
CAGCACCAGTTCTGAGAGTTGCATGGGTGATACTGGGCCAACTTTGGGGG
GAAACAAAATATATCATCAACTTATATTCCTCTATATTCAGTGGGCCATT
CTTGGTCGCTGCTTCCATATTATACCTTCGTCAACAGCATGTACGCCCTT
CGAGTTCGCTTCTCATCAGCTCGAAATTCCGCCTGGCAGCGATAGCATCC
GGACTGCTCGGTCTCCTGTTCCAGCTAACTAAGGGCCCAAGCTTCAACGG
AGGACCTTATCCAAAGGCTTTTTTGTTGGCACTAGGTCCTCAGCTGGCTT
GTTATATATTATTATTTGTAGCACTCGCTCGTGCTGCGAAGCGTCGCGGC
GACATGGGATCGTATACAGCTTGGATAACCTACCAAAATGGGCTTATTAG
CGCACCTATGTGGAGTGTGCTTTCCCTGTATCTCGCTCGTGATATCCTGC
GTTGTTCTGAGGAGAGTTTATGGATGATCACAGTGACGGAAGGCTTTTCG
CAAGGACTATTTAGCTCATTTGTTATTTATGTCCTTGCAACTTCGAAACT
GGCCAACGCACGCCGTCACACTGTAAAGGCTGATTGA back to topCoding sequence (CDS) from alignment at ch5:1774738..1776174- >KJC3_007192-T1 ID=KJC3_007192-T1|Name=KJC3_007192-T1|organism=Aspergillus niger KJC3|type=CDS|length=2532bp|location=Sequence derived from alignment at ch5:1774738..1776174- (Aspergillus niger KJC3)
GTTGTCAGCCGCCCCAGTTCAAGTTCAAAGGTCAAACACCGACATAATGG
AACAGGACAAGAAAGCGAACAATGACTTTGTGCCTGTGTACAAAAGAACT
GTTCAAGTGATAGTGATATCGATGGTTATTTTCTTTGCTCCGTTATCATT
CACATACTTCTTTGATGAGACACACACGTCCAACCTGAGCGACAAAGTTC
TGGCCATCCTAGTGAACCCTGAATTTGCGTATGGAGAGGGCTCCGCGACT
TTATCTGATATCAACGGAGGTCAAATGCGAATATTTCTGCGAAATCTTAC
TGCGATGTTCTCTCACACGATTGCTGGTTCTATAGCCATCGTCCTTGGCC
TGCCCCAATTCAACACGACCCTGCAGTTCAGATACCCTGCGATCCATCGG
TTTCTCGGGAGGCTATATATCCTATGCGCCTTAACAATCACCTGGTCTTC
AAGAACCTTCTTAGCGGATGCTATGCCAAAACATGAGGTTTTCTCCGGGG
ACCTCTTTGCATATATGCTATGGTCGTTATCACATGGTGTCCTGGGGACA
CTTGCCCTTGCAATATATGCCATTTGGAACCGTGACATTGGCTCTCATCG
AGAATTTATGGTCCTGAATTATGCATTCATGCTGTCAGCACCAGTTCTGA
GAGTTGCATGGGTGATACTGGGCCAACTTTGGGGGGAAACAAAATATATC
ATCAACTTATATTCCTCTATATTCAGTGGGCCATTCTTGGTCGCTGCTTC
CATATTATACCTTCGTCAACAGCATGTACGCCCTTCGAGTTCGCTTCTCA
TCAGCTCGAAATTCCGCCTGGCAGCGATAGCATCCGGACTGCTCGGTCTC
CTGTTCCAGCTAACTAAGGGCCCAAGCTTCAACGGAGGACCTTATCCAAA
GGCTTTTTTGTTGGCACTAGGTCCTCAGCTGGCTTGTTATATATTATTAT
TTGTAGCACTCGCTCGTGCTGCGAAGCGTCGCGGCGACATGGGATCGTAT
ACAGCTTGGATAACCTACCAAAATGGGCTTATTAGCGCACCTATGTGGAG
TGTGCTTTCCCTGTATCTCGCTCGTGATATCCTGCGTTGTTCTGAGGAGA
GTTTATGGATGATCACAGTGACGGAAGGCTTTTCGCAAGGACTATTTAGC
TCATTTGTTATTTATGTCCTTGCAACTTCGAAACTGGCCAACGCACGCCG
TCACACTGTAAAGGCTGATTGAATGCAGACTATCTTGGGAGTGACGATAG
AGAGAGTCCTCCATAGGTTGTCAGCCGCCCCAGTTCAAGTTCAAAGGTCA
AACACCGACATAATGGAACAGGACAAGAAAGCGAACAATGACTTTGTGCC
TGTGTACAAAAGAACTGTTCAAGTGATAGTGATATCGATGGTTATTTTCT
TTGCTCCGTTATCATTCACATACTTCTTTGATGAGACACACACGTCCAAC
CTGAGCGACAAAGTTCTGGCCATCCTAGTGAACCCTGAATTTGCGTATGG
AGAGGGCTCCGCGACTTTATCTGATATCAACGGAGGTCAAATGCGAATAT
TTCTGCGAAATCTTACTGCGATGTTCTCTCACACGATTGCTGGTTCTATA
GCCATCGTCCTTGGCCTGCCCCAATTCAACACGACCCTGCAGTTCAGATA
CCCTGCGATCCATCGGTTTCTCGGGAGGCTATATATCCTATGCGCCTTAA
CAATCACCTGGTCTTCAAGAACCTTCTTAGCGGATGCTATGCCAAAACAT
GAGGTTTTCTCCGGGGACCTCTTTGCATATATGCTATGGTCGTTATCACA
TGGTGTCCTGGGGACACTTGCCCTTGCAATATATGCCATTTGGAACCGTG
ACATTGGCTCTCATCGAGAATTTATGGTCCTGAATTATGCATTCATGCTG
TCAGCACCAGTTCTGAGAGTTGCATGGGTGATACTGGGCCAACTTTGGGG
GGAAACAAAATATATCATCAACTTATATTCCTCTATATTCAGTGGGCCAT
TCTTGGTCGCTGCTTCCATATTATACCTTCGTCAACAGCATGTACGCCCT
TCGAGTTCGCTTCTCATCAGCTCGAAATTCCGCCTGGCAGCGATAGCATC
CGGACTGCTCGGTCTCCTGTTCCAGCTAACTAAGGGCCCAAGCTTCAACG
GAGGACCTTATCCAAAGGCTTTTTTGTTGGCACTAGGTCCTCAGCTGGCT
TGTTATATATTATTATTTGTAGCACTCGCTCGTGCTGCGAAGCGTCGCGG
CGACATGGGATCGTATACAGCTTGGATAACCTACCAAAATGGGCTTATTA
GCGCACCTATGTGGAGTGTGCTTTCCCTGTATCTCGCTCGTGATATCCTG
CGTTGTTCTGAGGAGAGTTTATGGATGATCACAGTGACGGAAGGCTTTTC
GCAAGGACTATTTAGCTCATTTGTTATTTATGTCCTTGCAACTTCGAAAC
TGGCCAACGCACGCCGTCACACTGTAAAGGCTGATTGAATGCAGACTATC
TTGGGAGTGACGATAGAGAGAGTCCTCCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_5.3 |
| DBxref | InterPro:IPR018750 |
| DBxref | PFAM:PF10067 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1774738..1776174 - |
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