|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1787165..1788018+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007196-T1 ID=KJC3_007196-T1|Name=KJC3_007196-T1|organism=Aspergillus niger KJC3|type=mRNA|length=854bp|location=Sequence derived from alignment at ch5:1787165..1788018+ (Aspergillus niger KJC3)
TCAAGCCTTGACATCAACTATCTCATACATCTAAAGAACTCTTGCCACTT
ATTTCAAATACCCCATTCAGGAAAACCCATCAACATGCGCTTCGTAACTC
TTGTCCTTGCTGCCCTCGCCGCCGGCCCTCTGGCTGCCTTTGCCGCTCCT
GCTCCAGCAGAAGACGCTGCACAGAGCTGCCCAGATGGCGCCAAGATTCA
CTGCGGAGTAAGTCATATACTCAATTCCTTTCATGCTCACATTTCCCAAG
ACAGCAAGATTCATTTACTGATATATCATCAGAGCTGCAACGGCACCAGC
TGCCGAATCGGATTTGAAAACTAGTAAGCTCCATCACCCGACTTGCACCT
TTGATAACGGTGTAGCGTATTGGAAGCACACACTGACGGTAGTGGTCCGC
ATATAGCTCCTGCAATGAGGGCAGTGTATGTTATTTATAACCCTTTGCAC
CTTACCGATCCCAGCCCTACATCTTCCAGCTACGAGCTTTCACATCCCAT
CTTAACATGGATGTTTCTTTGCTGACTATTCTTTCTTGACGTTACAGTGC
ACTAAGCAGAGTGGAGGTGGCGATGGCGCCTCCTGCTGGGACGACAACCT
CGGTGGTCCTAGACACATTGTTTGCCCCGGAAAAGCTTAAGCTAGATCTG
ATTTATGATCTGAGCCAGAGGAACCCCCCAGAGTTTCTAGGAGATTGGTC
TCGTGGTGGTACGGAGGGAACTGAGTGAGGTCAGGCTGTGATTGAGGGCA
TGCCCGGGGTTTGACGTCTATGATGCAAATGTCTTTTAAGATTTTATGTA
TGTTATGAGGCAAGAGGTTAATGGCGCCAGCTTCTTGTCCTATTTGAAAC
GCTC back to topCoding sequence (CDS) from alignment at ch5:1787165..1788018+ >KJC3_007196-T1 ID=KJC3_007196-T1|Name=KJC3_007196-T1|organism=Aspergillus niger KJC3|type=CDS|length=1104bp|location=Sequence derived from alignment at ch5:1787165..1788018+ (Aspergillus niger KJC3)
ATGCGCTTCGTAACTCTTGTCCTTGCTGCCCTCGCCGCCGGCCCTCTGGC
TGCCTTTGCCGCTCCTGCTCCAGCAGAAGACGCTGCACAGAGCTGCCCAG
ATGGCGCCAAGATTCACTGCGGAAGCTGCAACGGCACCAGCTGCCGAATC
GGATTTGAAAACTACTCCTGCAATGAGGGCAGTTGCACTAAGCAGAGTGG
AGGTGGCGATGGCGCCTCCTGCTGGGACGACAACCTCGGTGGTCCTAGAC
ACATTGTTTGCCCCGGAAAAGCTTAAATGCGCTTCGTAACTCTTGTCCTT
GCTGCCCTCGCCGCCGGCCCTCTGGCTGCCTTTGCCGCTCCTGCTCCAGC
AGAAGACGCTGCACAGAGCTGCCCAGATGGCGCCAAGATTCACTGCGGAA
GCTGCAACGGCACCAGCTGCCGAATCGGATTTGAAAACTACTCCTGCAAT
GAGGGCAGTTGCACTAAGCAGAGTGGAGGTGGCGATGGCGCCTCCTGCTG
GGACGACAACCTCGGTGGTCCTAGACACATTGTTTGCCCCGGAAAAGCTT
AAATGCGCTTCGTAACTCTTGTCCTTGCTGCCCTCGCCGCCGGCCCTCTG
GCTGCCTTTGCCGCTCCTGCTCCAGCAGAAGACGCTGCACAGAGCTGCCC
AGATGGCGCCAAGATTCACTGCGGAAGCTGCAACGGCACCAGCTGCCGAA
TCGGATTTGAAAACTACTCCTGCAATGAGGGCAGTTGCACTAAGCAGAGT
GGAGGTGGCGATGGCGCCTCCTGCTGGGACGACAACCTCGGTGGTCCTAG
ACACATTGTTTGCCCCGGAAAAGCTTAAATGCGCTTCGTAACTCTTGTCC
TTGCTGCCCTCGCCGCCGGCCCTCTGGCTGCCTTTGCCGCTCCTGCTCCA
GCAGAAGACGCTGCACAGAGCTGCCCAGATGGCGCCAAGATTCACTGCGG
AAGCTGCAACGGCACCAGCTGCCGAATCGGATTTGAAAACTACTCCTGCA
ATGAGGGCAGTTGCACTAAGCAGAGTGGAGGTGGCGATGGCGCCTCCTGC
TGGGACGACAACCTCGGTGGTCCTAGACACATTGTTTGCCCCGGAAAAGC
TTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007196-T1.utr5p1 | KJC3_007196-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007196-T1.utr3p1 | KJC3_007196-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1787165..1788018 + |
|
