|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1793519..1796365+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007200-T2 ID=KJC3_007200-T2|Name=KJC3_007200-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2847bp|location=Sequence derived from alignment at ch5:1793519..1796365+ (Aspergillus niger KJC3) AAGCTATATCTGAGTATGACATCGTCAACAAATGGGCCAGGCCCGTCAGG
AAAATGGACATGCGAATTCTGCCCAGAGAGCTTTGCTCGAAAAGAGCATC
TCCAGCGCCATGAATTCAGCCATCTCGGACTGAAGCCGTTTCGGTGCGAT
GTGTGTTCTCGCATGTTTTCTAGAAGGTTTAGATGCTCAACATATGATCA
ACTTATATCGCTAGCTGTGTAGTAAGAAGACTAACGATTACAGGGATACT
TTGAGAAAACACCAAGCCACCCATTCCAGAGAAAGTGATGGGGAAGAACC
ACCTTGCACCCGCGGACGTCGGCGGTCCCAGAAAGCGTGCCTGAATTGTG
CCAAGGCGAAGCAACGCTGCAATGGCAAGTCGCCATGTCGTAGGTGTGTT
AAACGAAACATACAATGTGCATTTCCAAAGCCAGTCCCCGCAACGGAGGA
TCCTCCACTAGTAGAGACGCCGGAATTTGTTCATTCTACGCTCCTCCTGA
ATGACGACACTGCGTTCATCTCAAGTGGCAGTGGTGATCATGTGACTTTC
AACGAACAGCCTGTACAAGTCGGTCACTTTCCATTCGAAGACTTGGCAGC
TTCTTCGGGATCTGGCGAGCAACATCGAGAAGACTATAGCATGTACCCTA
TGGGTCACGCCAGTGAAAATGCTATTCATCCACATGTGTTATCACTACCT
AGCCAAGGTTTAGGCGACGCTATGGCAGTGGACATGAATATAAGTTTACC
ATCAGGTGGATCAGTCTCCTCAGTCTCCACTAGGGAAGACAACGATGATA
TCCCTTCGTCGCAAAGTGATTTATTCACGCCAGAAGACTCTCAGGCTCAC
CGTCACTGCTGCACTCGGTTCCCAGAGACTCAGCCAGATGAAGACGTAAT
TGCAGCTGAGAATTATGGGCATGTTAGGCCCATACCGCACAAGCAATATC
AACAAATCTATGGCTATTGGAAAAGTCAGCAATGTCCCTCGTGTGCATCA
CCTTTCATCAGCCTTTCCTTCCTGAACGCAATGGTCCAGCTCTACTTCGA
ACACCATGACCCCTGGATGCCTTTTATTCATCGATTCTCTTTCGACAAGG
AAGGTGTCTCCTGGGCTCTCATTCTAGCGGTGGCATCTGTCGGGTGTCAA
TACTCTAATGTGGAGGGCTCGGAGCTCTATATCCTAGGTCTACAGGACCT
TCTACAGAAGGCGCTTCCGAAGGATGTAAGTCGCTATAACTTCAGTATCT
GTTTCAGTTTAACTGACTCGCTAGGCCACGGAAACTATCTCTTTTGACCA
AACCACTCTTGCGCAGTGTCTTCTTCTACGCAATACAGGTCTCTTATTTA
GCGGTTACGAAGATGAGATTCTTACGTCTCAGTACCAGAGGAATATGCTC
ACTTCGGTCGCTAAATCAGTCTCTGCCAACCTTGCTGACAGTATACCTTC
TCCAGATGATCTGGACACATATGAACAGTGGCGTCGCTGGGTGGAGTCAG
AGTCTCAGAGAAGAATCATCTACTGTATATATGGTGAGAACACTCCTTAT
ATACCACAGAAACACAAAGCTTATCTTAACGGTACAGTAATTGAATGCTG
CTATTGGATCTTCAAGGATGTGCCCTCATCAATGACCCTTGACGATCTCA
AGATAGCTCTACCTTGCAAAGATATTTTATGGACATCTGATTTCGAAATG
TCGCAGAAACATAGCCTTGCCAATTCAGGTAAGAAGTCATCACATCTTCA
ATGCTTTCTTGAACTGATCTAATCTAACTTGGAACCAGAAAACATGCCAA
GTCTAAAAACTGCGTTCTCTAACCCAGACTTACTGAATGATCTGCTCAAC
GATAACTCCAACCTCAGCAATCTTGTAATACTCCTAACATTCAACATCGA
AGAAAGACGTCTTTTGCGATCCACACGGCCATGGTTCGCAGCCGACATGG
CTACAGGTCTCAACGAGCGGAAGCTGTACAAATGGCCCGACGAACTAGCA
ACCTTCCGAACGGCCCTAGACGATAAATGCGACCCCACGATCAAACGTTT
CTCCGTGTTTAAATCCATATCGAACAACGCGCCTACCTTCCTAAAAGTGA
TGTTTCACGTCACCAACATACTCCGGCGCATGCCACTGCGCTGTTTATAT
GCCTTGAGCGGATGGCAAGTCACCGTGAACCAGATGACCGCCGCCGCTAC
ATCCCTGTCACATTGGATGCAGCAAAATCCAACACTAGCCCGAGAAACCC
TTCTACAAGCAACTACATTGTTTGGAGTTCTCTATGACGAGACTACAGGA
CCAGGCTGTCACCACCTCGCCTTTCTCATCGCGGGTCTCTATATCTGGGC
TTATTGCATCGTGGGCGGAGAAGATGGTACTGGGGGAGCGAACGGAGCAC
GGAAAATCAGTCGACGACCTCTTCGGCTCGATAAAACAGTCCCCGATGAT
ATGAAAGAGTTCTGGATCCAAGGCACGCTAGAAGCTCCTATCTATGTCAA
AGGAGCAGGTATTTTGAACGGCCCGGAGAGTGCGATCCGTGTTCTCAAAG
CTCTTAGGCTCGCCCTGTCGAGTCACACGTCTTGGCCTTCTCTTCGGCAT
GGGCTAATATACTCTATTTCGGAGATGATAGAGGGTAGGTTCGCGTCGCA
TAGCCCGGAGTTAAAGTCTAGTGGACAGAGAAAGAGCGTGATTAGGGGAA
GTCAAGCATAGTCAAATTCGAATATTGGCAAGAGTTGAGACATCGTGTAA
TCTTCACGAAGGGGGCTTTATTAGAGAGCTTTTCGGCTATGAACGCGTCA
GGTCAGAATATGAGCATGACTCGCGCAGATACAAGACAATGTTCATC back to topCoding sequence (CDS) from alignment at ch5:1793519..1796365+ >KJC3_007200-T2 ID=KJC3_007200-T2|Name=KJC3_007200-T2|organism=Aspergillus niger KJC3|type=CDS|length=7632bp|location=Sequence derived from alignment at ch5:1793519..1796365+ (Aspergillus niger KJC3) ATGTACCCTATGGGTCACGCCAGTGAAAATGCTATTCATCCACATGTGTT ATCACTACCTAGCCAAGGTTTAGGCGACGCTATGGCAGTGGACATGAATA TAAGTTTACCATCAGGTGGATCAGTCTCCTCAGTCTCCACTAGGGAAGAC AACGATGATATCCCTTCGTCGCAAAGTGATTTATTCACGCCAGAAGACTC TCAGGCTCACCGTCACTGCTGCACTCGGTTCCCAGAGACTCAGCCAGATG AAGACGTAATTGCAGCTGAGAATTATGGGCATGTTAGGCCCATACCGCAC AAGCAATATCAACAAATCTATGGCTATTGGAAAAGTCAGCAATGTCCCTC GTGTGCATCACCTTTCATCAGCCTTTCCTTCCTGAACGCAATGGTCCAGC TCTACTTCGAACACCATGACCCCTGGATGCCTTTTATTCATCGATTCTCT TTCGACAAGGAAGGTGTCTCCTGGGCTCTCATTCTAGCGGTGGCATCTGT CGGGTGTCAATACTCTAATGTGGAGGGCTCGGAGCTCTATATCCTAGGTC TACAGGACCTTCTACAGAAGGCGCTTCCGAAGGATGCCACGGAAACTATC TCTTTTGACCAAACCACTCTTGCGCAGTGTCTTCTTCTACGCAATACAGG TCTCTTATTTAGCGGTTACGAAGATGAGATTCTTACGTCTCAGTACCAGA GGAATATGCTCACTTCGGTCGCTAAATCAGTCTCTGCCAACCTTGCTGAC AGTATACCTTCTCCAGATGATCTGGACACATATGAACAGTGGCGTCGCTG GGTGGAGTCAGAGTCTCAGAGAAGAATCATCTACTGTATATATGTAATTG AATGCTGCTATTGGATCTTCAAGGATGTGCCCTCATCAATGACCCTTGAC GATCTCAAGATAGCTCTACCTTGCAAAGATATTTTATGGACATCTGATTT CGAAATGTCGCAGAAACATAGCCTTGCCAATTCAGAAAACATGCCAAGTC TAAAAACTGCGTTCTCTAACCCAGACTTACTGAATGATCTGCTCAACGAT AACTCCAACCTCAGCAATCTTGTAATACTCCTAACATTCAACATCGAAGA AAGACGTCTTTTGCGATCCACACGGCCATGGTTCGCAGCCGACATGGCTA CAGGTCTCAACGAGCGGAAGCTGTACAAATGGCCCGACGAACTAGCAACC TTCCGAACGGCCCTAGACGATAAATGCGACCCCACGATCAAACGTTTCTC CGTGTTTAAATCCATATCGAACAACGCGCCTACCTTCCTAAAAGTGATGT TTCACGTCACCAACATACTCCGGCGCATGCCACTGCGCTGTTTATATGCC TTGAGCGGATGGCAAGTCACCGTGAACCAGATGACCGCCGCCGCTACATC CCTGTCACATTGGATGCAGCAAAATCCAACACTAGCCCGAGAAACCCTTC TACAAGCAACTACATTGTTTGGAGTTCTCTATGACGAGACTACAGGACCA GGCTGTCACCACCTCGCCTTTCTCATCGCGGGTCTCTATATCTGGGCTTA TTGCATCGTGGGCGGAGAAGATGGTACTGGGGGAGCGAACGGAGCACGGA AAATCAGTCGACGACCTCTTCGGCTCGATAAAACAGTCCCCGATGATATG AAAGAGTTCTGGATCCAAGGCACGCTAGAAGCTCCTATCTATGTCAAAGG AGCAGGTATTTTGAACGGCCCGGAGAGTGCGATCCGTGTTCTCAAAGCTC TTAGGCTCGCCCTGTCGAGTCACACGTCTTGGCCTTCTCTTCGGCATGGG CTAATATACTCTATTTCGGAGATGATAGAGGGTAGGTTCGCGTCGCATAG CCCGGAGTTAAAGTCTAGTGGACAGAGAAAGAGCGTGATTAGGGGAAGTC AAGCATAGATGTACCCTATGGGTCACGCCAGTGAAAATGCTATTCATCCA CATGTGTTATCACTACCTAGCCAAGGTTTAGGCGACGCTATGGCAGTGGA CATGAATATAAGTTTACCATCAGGTGGATCAGTCTCCTCAGTCTCCACTA GGGAAGACAACGATGATATCCCTTCGTCGCAAAGTGATTTATTCACGCCA GAAGACTCTCAGGCTCACCGTCACTGCTGCACTCGGTTCCCAGAGACTCA GCCAGATGAAGACGTAATTGCAGCTGAGAATTATGGGCATGTTAGGCCCA TACCGCACAAGCAATATCAACAAATCTATGGCTATTGGAAAAGTCAGCAA TGTCCCTCGTGTGCATCACCTTTCATCAGCCTTTCCTTCCTGAACGCAAT GGTCCAGCTCTACTTCGAACACCATGACCCCTGGATGCCTTTTATTCATC GATTCTCTTTCGACAAGGAAGGTGTCTCCTGGGCTCTCATTCTAGCGGTG GCATCTGTCGGGTGTCAATACTCTAATGTGGAGGGCTCGGAGCTCTATAT CCTAGGTCTACAGGACCTTCTACAGAAGGCGCTTCCGAAGGATGCCACGG AAACTATCTCTTTTGACCAAACCACTCTTGCGCAGTGTCTTCTTCTACGC AATACAGGTCTCTTATTTAGCGGTTACGAAGATGAGATTCTTACGTCTCA GTACCAGAGGAATATGCTCACTTCGGTCGCTAAATCAGTCTCTGCCAACC TTGCTGACAGTATACCTTCTCCAGATGATCTGGACACATATGAACAGTGG CGTCGCTGGGTGGAGTCAGAGTCTCAGAGAAGAATCATCTACTGTATATA TGTAATTGAATGCTGCTATTGGATCTTCAAGGATGTGCCCTCATCAATGA CCCTTGACGATCTCAAGATAGCTCTACCTTGCAAAGATATTTTATGGACA TCTGATTTCGAAATGTCGCAGAAACATAGCCTTGCCAATTCAGAAAACAT GCCAAGTCTAAAAACTGCGTTCTCTAACCCAGACTTACTGAATGATCTGC TCAACGATAACTCCAACCTCAGCAATCTTGTAATACTCCTAACATTCAAC ATCGAAGAAAGACGTCTTTTGCGATCCACACGGCCATGGTTCGCAGCCGA CATGGCTACAGGTCTCAACGAGCGGAAGCTGTACAAATGGCCCGACGAAC TAGCAACCTTCCGAACGGCCCTAGACGATAAATGCGACCCCACGATCAAA CGTTTCTCCGTGTTTAAATCCATATCGAACAACGCGCCTACCTTCCTAAA AGTGATGTTTCACGTCACCAACATACTCCGGCGCATGCCACTGCGCTGTT TATATGCCTTGAGCGGATGGCAAGTCACCGTGAACCAGATGACCGCCGCC GCTACATCCCTGTCACATTGGATGCAGCAAAATCCAACACTAGCCCGAGA AACCCTTCTACAAGCAACTACATTGTTTGGAGTTCTCTATGACGAGACTA CAGGACCAGGCTGTCACCACCTCGCCTTTCTCATCGCGGGTCTCTATATC TGGGCTTATTGCATCGTGGGCGGAGAAGATGGTACTGGGGGAGCGAACGG AGCACGGAAAATCAGTCGACGACCTCTTCGGCTCGATAAAACAGTCCCCG ATGATATGAAAGAGTTCTGGATCCAAGGCACGCTAGAAGCTCCTATCTAT GTCAAAGGAGCAGGTATTTTGAACGGCCCGGAGAGTGCGATCCGTGTTCT CAAAGCTCTTAGGCTCGCCCTGTCGAGTCACACGTCTTGGCCTTCTCTTC GGCATGGGCTAATATACTCTATTTCGGAGATGATAGAGGGTAGGTTCGCG TCGCATAGCCCGGAGTTAAAGTCTAGTGGACAGAGAAAGAGCGTGATTAG GGGAAGTCAAGCATAGATGTACCCTATGGGTCACGCCAGTGAAAATGCTA TTCATCCACATGTGTTATCACTACCTAGCCAAGGTTTAGGCGACGCTATG GCAGTGGACATGAATATAAGTTTACCATCAGGTGGATCAGTCTCCTCAGT CTCCACTAGGGAAGACAACGATGATATCCCTTCGTCGCAAAGTGATTTAT TCACGCCAGAAGACTCTCAGGCTCACCGTCACTGCTGCACTCGGTTCCCA GAGACTCAGCCAGATGAAGACGTAATTGCAGCTGAGAATTATGGGCATGT TAGGCCCATACCGCACAAGCAATATCAACAAATCTATGGCTATTGGAAAA GTCAGCAATGTCCCTCGTGTGCATCACCTTTCATCAGCCTTTCCTTCCTG AACGCAATGGTCCAGCTCTACTTCGAACACCATGACCCCTGGATGCCTTT TATTCATCGATTCTCTTTCGACAAGGAAGGTGTCTCCTGGGCTCTCATTC TAGCGGTGGCATCTGTCGGGTGTCAATACTCTAATGTGGAGGGCTCGGAG CTCTATATCCTAGGTCTACAGGACCTTCTACAGAAGGCGCTTCCGAAGGA TGCCACGGAAACTATCTCTTTTGACCAAACCACTCTTGCGCAGTGTCTTC TTCTACGCAATACAGGTCTCTTATTTAGCGGTTACGAAGATGAGATTCTT ACGTCTCAGTACCAGAGGAATATGCTCACTTCGGTCGCTAAATCAGTCTC TGCCAACCTTGCTGACAGTATACCTTCTCCAGATGATCTGGACACATATG AACAGTGGCGTCGCTGGGTGGAGTCAGAGTCTCAGAGAAGAATCATCTAC TGTATATATGTAATTGAATGCTGCTATTGGATCTTCAAGGATGTGCCCTC ATCAATGACCCTTGACGATCTCAAGATAGCTCTACCTTGCAAAGATATTT TATGGACATCTGATTTCGAAATGTCGCAGAAACATAGCCTTGCCAATTCA GAAAACATGCCAAGTCTAAAAACTGCGTTCTCTAACCCAGACTTACTGAA TGATCTGCTCAACGATAACTCCAACCTCAGCAATCTTGTAATACTCCTAA CATTCAACATCGAAGAAAGACGTCTTTTGCGATCCACACGGCCATGGTTC GCAGCCGACATGGCTACAGGTCTCAACGAGCGGAAGCTGTACAAATGGCC CGACGAACTAGCAACCTTCCGAACGGCCCTAGACGATAAATGCGACCCCA CGATCAAACGTTTCTCCGTGTTTAAATCCATATCGAACAACGCGCCTACC TTCCTAAAAGTGATGTTTCACGTCACCAACATACTCCGGCGCATGCCACT GCGCTGTTTATATGCCTTGAGCGGATGGCAAGTCACCGTGAACCAGATGA CCGCCGCCGCTACATCCCTGTCACATTGGATGCAGCAAAATCCAACACTA GCCCGAGAAACCCTTCTACAAGCAACTACATTGTTTGGAGTTCTCTATGA CGAGACTACAGGACCAGGCTGTCACCACCTCGCCTTTCTCATCGCGGGTC TCTATATCTGGGCTTATTGCATCGTGGGCGGAGAAGATGGTACTGGGGGA GCGAACGGAGCACGGAAAATCAGTCGACGACCTCTTCGGCTCGATAAAAC AGTCCCCGATGATATGAAAGAGTTCTGGATCCAAGGCACGCTAGAAGCTC CTATCTATGTCAAAGGAGCAGGTATTTTGAACGGCCCGGAGAGTGCGATC CGTGTTCTCAAAGCTCTTAGGCTCGCCCTGTCGAGTCACACGTCTTGGCC TTCTCTTCGGCATGGGCTAATATACTCTATTTCGGAGATGATAGAGGGTA GGTTCGCGTCGCATAGCCCGGAGTTAAAGTCTAGTGGACAGAGAAAGAGC GTGATTAGGGGAAGTCAAGCATAGATGTACCCTATGGGTCACGCCAGTGA AAATGCTATTCATCCACATGTGTTATCACTACCTAGCCAAGGTTTAGGCG ACGCTATGGCAGTGGACATGAATATAAGTTTACCATCAGGTGGATCAGTC TCCTCAGTCTCCACTAGGGAAGACAACGATGATATCCCTTCGTCGCAAAG TGATTTATTCACGCCAGAAGACTCTCAGGCTCACCGTCACTGCTGCACTC GGTTCCCAGAGACTCAGCCAGATGAAGACGTAATTGCAGCTGAGAATTAT GGGCATGTTAGGCCCATACCGCACAAGCAATATCAACAAATCTATGGCTA TTGGAAAAGTCAGCAATGTCCCTCGTGTGCATCACCTTTCATCAGCCTTT CCTTCCTGAACGCAATGGTCCAGCTCTACTTCGAACACCATGACCCCTGG ATGCCTTTTATTCATCGATTCTCTTTCGACAAGGAAGGTGTCTCCTGGGC TCTCATTCTAGCGGTGGCATCTGTCGGGTGTCAATACTCTAATGTGGAGG GCTCGGAGCTCTATATCCTAGGTCTACAGGACCTTCTACAGAAGGCGCTT CCGAAGGATGCCACGGAAACTATCTCTTTTGACCAAACCACTCTTGCGCA GTGTCTTCTTCTACGCAATACAGGTCTCTTATTTAGCGGTTACGAAGATG AGATTCTTACGTCTCAGTACCAGAGGAATATGCTCACTTCGGTCGCTAAA TCAGTCTCTGCCAACCTTGCTGACAGTATACCTTCTCCAGATGATCTGGA CACATATGAACAGTGGCGTCGCTGGGTGGAGTCAGAGTCTCAGAGAAGAA TCATCTACTGTATATATGTAATTGAATGCTGCTATTGGATCTTCAAGGAT GTGCCCTCATCAATGACCCTTGACGATCTCAAGATAGCTCTACCTTGCAA AGATATTTTATGGACATCTGATTTCGAAATGTCGCAGAAACATAGCCTTG CCAATTCAGAAAACATGCCAAGTCTAAAAACTGCGTTCTCTAACCCAGAC TTACTGAATGATCTGCTCAACGATAACTCCAACCTCAGCAATCTTGTAAT ACTCCTAACATTCAACATCGAAGAAAGACGTCTTTTGCGATCCACACGGC CATGGTTCGCAGCCGACATGGCTACAGGTCTCAACGAGCGGAAGCTGTAC AAATGGCCCGACGAACTAGCAACCTTCCGAACGGCCCTAGACGATAAATG CGACCCCACGATCAAACGTTTCTCCGTGTTTAAATCCATATCGAACAACG CGCCTACCTTCCTAAAAGTGATGTTTCACGTCACCAACATACTCCGGCGC ATGCCACTGCGCTGTTTATATGCCTTGAGCGGATGGCAAGTCACCGTGAA CCAGATGACCGCCGCCGCTACATCCCTGTCACATTGGATGCAGCAAAATC CAACACTAGCCCGAGAAACCCTTCTACAAGCAACTACATTGTTTGGAGTT CTCTATGACGAGACTACAGGACCAGGCTGTCACCACCTCGCCTTTCTCAT CGCGGGTCTCTATATCTGGGCTTATTGCATCGTGGGCGGAGAAGATGGTA CTGGGGGAGCGAACGGAGCACGGAAAATCAGTCGACGACCTCTTCGGCTC GATAAAACAGTCCCCGATGATATGAAAGAGTTCTGGATCCAAGGCACGCT AGAAGCTCCTATCTATGTCAAAGGAGCAGGTATTTTGAACGGCCCGGAGA GTGCGATCCGTGTTCTCAAAGCTCTTAGGCTCGCCCTGTCGAGTCACACG TCTTGGCCTTCTCTTCGGCATGGGCTAATATACTCTATTTCGGAGATGAT AGAGGGTAGGTTCGCGTCGCATAGCCCGGAGTTAAAGTCTAGTGGACAGA GAAAGAGCGTGATTAGGGGAAGTCAAGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_007200-T2.utr5p1 | KJC3_007200-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_007200-T2.utr3p1 | KJC3_007200-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch5 | supercontig | ch5:1793519..1796365 + |
|