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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1824144..1824963- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007212-T1 ID=KJC3_007212-T1|Name=KJC3_007212-T1|organism=Aspergillus niger KJC3|type=mRNA|length=820bp|location=Sequence derived from alignment at ch5:1824144..1824963- (Aspergillus niger KJC3)
ATGACACTCTCTGGCCGTGTGGTCGTCGTCACTGGCGCCTCCAAGGGCAT
CGGGAAAGAAATCGCCCTGCGAGCTGCTGCCGAAGGTGCCAATGTCGTCA
TCAATTACCTGTCGGATATCAAAGCTGCAAATGCCCTGGTTATGCAATTA
GGACACGACCGTGCTCTGGCAGTGCGGGCTGATACTTCCAATATCAACGA
GGTGGACAGCTTAATTGAGGCCACTGTGTCTCGCTTCGGAAAAATCGACG
TCCTAATTCCCAACGCAGCTTACGTTCCGGATCGAACCCTGCAGAACGTC
CCCGAAGAAGAATTTGACCGCGCCTTCGCGGTCAACGTCAAAGGACCTTG
CTTCCTAGTACAGGTGCGCTATTCCATTACACCGACCGTATTGCCTGGGG
TGAGTGTGTCGGGGAGCAAAAAGCCGTGCTGACGGTTCTCAGAGAGCACT
ACCTCACATGACGTCCGGTGGCACGATTATTTTTATCTCCACTGACATGA
CCGACGCGTCCACTGTGATGCCTCAATTCCTTCTCTATGTGTCGACCAAG
GCGGCATTAAATCAAATGGTTAAGGTGCTTGCACGCGACCTTGCCGCTAC
GGGTATCCGAGTGAATGCGGTCTCTCCGGGTGCAACAAGCACCGAGTCAT
TCCACAAGGCTATGGATGAGAACAAGGCCAAGATGCTTGCAAGTCACCAT
CCCTTCAACCGCATTGGGCGCGCGGACGAGATTGCCGCAGCCGTGAGTCT
CCTGTGGAGGAAGGACAGCGGCTGGATCACTGGCCAAGTTCTGCGAGTGA
ACGGGGGCAGTGTTGTCTGA back to topCoding sequence (CDS) from alignment at ch5:1824144..1824963- >KJC3_007212-T1 ID=KJC3_007212-T1|Name=KJC3_007212-T1|organism=Aspergillus niger KJC3|type=CDS|length=1482bp|location=Sequence derived from alignment at ch5:1824144..1824963- (Aspergillus niger KJC3)
AGAGCACTACCTCACATGACGTCCGGTGGCACGATTATTTTTATCTCCAC
TGACATGACCGACGCGTCCACTGTGATGCCTCAATTCCTTCTCTATGTGT
CGACCAAGGCGGCATTAAATCAAATGGTTAAGGTGCTTGCACGCGACCTT
GCCGCTACGGGTATCCGAGTGAATGCGGTCTCTCCGGGTGCAACAAGCAC
CGAGTCATTCCACAAGGCTATGGATGAGAACAAGGCCAAGATGCTTGCAA
GTCACCATCCCTTCAACCGCATTGGGCGCGCGGACGAGATTGCCGCAGCC
GTGAGTCTCCTGTGGAGGAAGGACAGCGGCTGGATCACTGGCCAAGTTCT
GCGAGTGAACGGGGGCAGTGTTGTCTGAATGACACTCTCTGGCCGTGTGG
TCGTCGTCACTGGCGCCTCCAAGGGCATCGGGAAAGAAATCGCCCTGCGA
GCTGCTGCCGAAGGTGCCAATGTCGTCATCAATTACCTGTCGGATATCAA
AGCTGCAAATGCCCTGGTTATGCAATTAGGACACGACCGTGCTCTGGCAG
TGCGGGCTGATACTTCCAATATCAACGAGGTGGACAGCTTAATTGAGGCC
ACTGTGTCTCGCTTCGGAAAAATCGACGTCCTAATTCCCAACGCAGCTTA
CGTTCCGGATCGAACCCTGCAGAACGTCCCCGAAGAAGAATTTGACCGCG
CCTTCGCGGTCAACGTCAAAGGACCTTGCTTCCTAGTACAGAGAGCACTA
CCTCACATGACGTCCGGTGGCACGATTATTTTTATCTCCACTGACATGAC
CGACGCGTCCACTGTGATGCCTCAATTCCTTCTCTATGTGTCGACCAAGG
CGGCATTAAATCAAATGGTTAAGGTGCTTGCACGCGACCTTGCCGCTACG
GGTATCCGAGTGAATGCGGTCTCTCCGGGTGCAACAAGCACCGAGTCATT
CCACAAGGCTATGGATGAGAACAAGGCCAAGATGCTTGCAAGTCACCATC
CCTTCAACCGCATTGGGCGCGCGGACGAGATTGCCGCAGCCGTGAGTCTC
CTGTGGAGGAAGGACAGCGGCTGGATCACTGGCCAAGTTCTGCGAGTGAA
CGGGGGCAGTGTTGTCTGAATGACACTCTCTGGCCGTGTGGTCGTCGTCA
CTGGCGCCTCCAAGGGCATCGGGAAAGAAATCGCCCTGCGAGCTGCTGCC
GAAGGTGCCAATGTCGTCATCAATTACCTGTCGGATATCAAAGCTGCAAA
TGCCCTGGTTATGCAATTAGGACACGACCGTGCTCTGGCAGTGCGGGCTG
ATACTTCCAATATCAACGAGGTGGACAGCTTAATTGAGGCCACTGTGTCT
CGCTTCGGAAAAATCGACGTCCTAATTCCCAACGCAGCTTACGTTCCGGA
TCGAACCCTGCAGAACGTCCCCGAAGAAGAATTTGACCGCGCCTTCGCGG
TCAACGTCAAAGGACCTTGCTTCCTAGTACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1824144..1824963 - |
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