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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1829787..1831794- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007214-T1 ID=KJC3_007214-T1|Name=KJC3_007214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2008bp|location=Sequence derived from alignment at ch5:1829787..1831794- (Aspergillus niger KJC3)
CAAGACTCTTTCCAACGGTCCATACTGCTCGCTTTTTTTACTCTGTACTA
TCATGAGGATGGTTCGATCTGCCTCGGTTGCCGGTCATTCGGTTTGCTGG
CAATCCTGATACTCCATCGAATTCACTTTCGTAGTCAAAACATAAATGAA
TCTAACTTCCCGCCCGGTACATTTATTTACCTTCATCAACCCCTCTTCTC
GCCACTGGTTTGGCTCTTCTTTTCTCCTCACACACGCACTTTCTTGGGTT
TCCCTTCTTCTTCCTCCCCTTCCCCACTTCAACCTTCGCCATGTCGACAC
TTTTGTTTGTCGCAACGGCCTCCCCCATCCTCTACCTGCTATATGTGCTG
CTCTCTCGCTGGCAACATGCCCAAAATGCCCGTAAATGGAACTGTGGGAG
TGTGCCCTCTTACCCCGGGGATCTGCTGGGCATCAACACCCTGAAGGAGG
CGCTGGCCATGGACAAGGCTCGCCAGGTGCCCACTGTGACCCGCCGGCGT
GTTGAGACCATGTCCGCCCGCGAGAATCGCTATACCACCACTTTCCAATT
CCGTCAACTGGGCACCGATGTCATCAGCACCTGCGATCCCAAGAACGTCC
AGGCCTTGCTGGCCACCCAGTTCAAGGACTTTGAATTGGGTCAGTCCCGT
CGCAACGCTCTGCACTGGCTGCTCGGCCGCGGCATCGTACGTCCACTACT
ACTACCTTTCCTATCCAAACCATCCCTCTTCTAACTCGTATCCAGTTCAC
TGCCGATGGCGACCACTGGTCTCGGTCTCGCGCTCTCCTCCGTCCTCAAT
TCACCCGCGACCAGATCAGCGACCTCGATCTCGAGGAGCGTCACGTCCAA
GTCGCCATGAAAGCCATGCCCGTCGACGCCACCGGCTGGACCCCCGCCAC
CGACATCCAGACCATCTTCTTCCGCCTGACCATGGACACCGCGACTGAGT
TCCTCTTCGGCGAGAGCGTCCAGAGCCAAGCCGCCGCCCTCAGCAATGGC
GCCATTCCCCAAGACGACTTCCCTGCCCAGTTCGACCGCGGCCAATGGTA
CTCTGCCCAGCGCGCCCGTTTCGAGAAGCTCTACTGGATCATCAACAACA
AGGAAAGCCGCGCGATCAACAAGGCCGTCCACGCCTACGTCGACCGCTTC
GTCACCGCCGCCCTCAACTCCGACCCCGAGAAGAAACCCACCGGCCACTA
TGTCTTCCTGCACGGTCTGGCCGAGGCCACCCGCGACCCCGTCGAACTGC
GCTCCCAGCTCCTTAACATCCTCCTTGCCGGTCGCGATACCACTGCCTCC
CTCCTCTCCTGGTGCGTCCTCTTCCTCGCCCGCCACCCGGCCTACTTCTC
CTCCCTGCGCGCCACCATCCTCGCGGAATTCGGCTCCTACTCGTCCCCCC
GTGACATCACCTTCGCCAATCTCAAGTCCTGCCGTCCCCTGCAGAACTTC
CTCAATGAGGTCCTCCGTCTCTACCCTATTGTCCCTGGTAACCGTCGCAC
GGCTGTCCGCAACACCACCCTCCCCACGGGCGGTGGTCCCGCGGGCACCG
ACCCCGTCTACGTCAAGAAGGGCCAGCCCGTCTTCTACAGCACTTACGTG
ATGCACCGTCGGCCTGATCTGTGGGGTGCTGATGCGGACGAGTTCCGTCC
GGATCGCTGGAACGAGCGCAAGGCCGGATGGGAGTACTTGCCGTTCAACG
GTGGGCCGCGGATCTGCATTGGGCAGCAGTTCGCACTTACGGAGACGGGG
TATGTCCTGGTCAGACTGTTGCAGCGCTTCGATGTGATTGAGGGCGTGGG
CAAGACCAAAGAGGGGGAGATCAATATGCAGATGAGTTTGACGAATGCGC
CGGGAGATAATGTGACGGTGCGGTTGCATGAGGACGCTTCTAACTAGTTT
CTTTGTTACTGTTACTGTTGATGATTGATTGGGATACCCAATGTCCATAT
GTGTGTTAGCGTATATAGATTGTGATTGGCACATTGCATTGCATTACATA
CATCTTTC back to topCoding sequence (CDS) from alignment at ch5:1829787..1831794- >KJC3_007214-T1 ID=KJC3_007214-T1|Name=KJC3_007214-T1|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch5:1829787..1831794- (Aspergillus niger KJC3)
TTCACTGCCGATGGCGACCACTGGTCTCGGTCTCGCGCTCTCCTCCGTCC
TCAATTCACCCGCGACCAGATCAGCGACCTCGATCTCGAGGAGCGTCACG
TCCAAGTCGCCATGAAAGCCATGCCCGTCGACGCCACCGGCTGGACCCCC
GCCACCGACATCCAGACCATCTTCTTCCGCCTGACCATGGACACCGCGAC
TGAGTTCCTCTTCGGCGAGAGCGTCCAGAGCCAAGCCGCCGCCCTCAGCA
ATGGCGCCATTCCCCAAGACGACTTCCCTGCCCAGTTCGACCGCGGCCAA
TGGTACTCTGCCCAGCGCGCCCGTTTCGAGAAGCTCTACTGGATCATCAA
CAACAAGGAAAGCCGCGCGATCAACAAGGCCGTCCACGCCTACGTCGACC
GCTTCGTCACCGCCGCCCTCAACTCCGACCCCGAGAAGAAACCCACCGGC
CACTATGTCTTCCTGCACGGTCTGGCCGAGGCCACCCGCGACCCCGTCGA
ACTGCGCTCCCAGCTCCTTAACATCCTCCTTGCCGGTCGCGATACCACTG
CCTCCCTCCTCTCCTGGTGCGTCCTCTTCCTCGCCCGCCACCCGGCCTAC
TTCTCCTCCCTGCGCGCCACCATCCTCGCGGAATTCGGCTCCTACTCGTC
CCCCCGTGACATCACCTTCGCCAATCTCAAGTCCTGCCGTCCCCTGCAGA
ACTTCCTCAATGAGGTCCTCCGTCTCTACCCTATTGTCCCTGGTAACCGT
CGCACGGCTGTCCGCAACACCACCCTCCCCACGGGCGGTGGTCCCGCGGG
CACCGACCCCGTCTACGTCAAGAAGGGCCAGCCCGTCTTCTACAGCACTT
ACGTGATGCACCGTCGGCCTGATCTGTGGGGTGCTGATGCGGACGAGTTC
CGTCCGGATCGCTGGAACGAGCGCAAGGCCGGATGGGAGTACTTGCCGTT
CAACGGTGGGCCGCGGATCTGCATTGGGCAGCAGTTCGCACTTACGGAGA
CGGGGTATGTCCTGGTCAGACTGTTGCAGCGCTTCGATGTGATTGAGGGC
GTGGGCAAGACCAAAGAGGGGGAGATCAATATGCAGATGAGTTTGACGAA
TGCGCCGGGAGATAATGTGACGGTGCGGTTGCATGAGGACGCTTCTAACT
AGATGTCGACACTTTTGTTTGTCGCAACGGCCTCCCCCATCCTCTACCTG
CTATATGTGCTGCTCTCTCGCTGGCAACATGCCCAAAATGCCCGTAAATG
GAACTGTGGGAGTGTGCCCTCTTACCCCGGGGATCTGCTGGGCATCAACA
CCCTGAAGGAGGCGCTGGCCATGGACAAGGCTCGCCAGGTGCCCACTGTG
ACCCGCCGGCGTGTTGAGACCATGTCCGCCCGCGAGAATCGCTATACCAC
CACTTTCCAATTCCGTCAACTGGGCACCGATGTCATCAGCACCTGCGATC
CCAAGAACGTCCAGGCCTTGCTGGCCACCCAGTTCAAGGACTTTGAATTG
GGTCAGTCCCGTCGCAACGCTCTGCACTGGCTGCTCGGCCGCGGCATCTT
CACTGCCGATGGCGACCACTGGTCTCGGTCTCGCGCTCTCCTCCGTCCTC
AATTCACCCGCGACCAGATCAGCGACCTCGATCTCGAGGAGCGTCACGTC
CAAGTCGCCATGAAAGCCATGCCCGTCGACGCCACCGGCTGGACCCCCGC
CACCGACATCCAGACCATCTTCTTCCGCCTGACCATGGACACCGCGACTG
AGTTCCTCTTCGGCGAGAGCGTCCAGAGCCAAGCCGCCGCCCTCAGCAAT
GGCGCCATTCCCCAAGACGACTTCCCTGCCCAGTTCGACCGCGGCCAATG
GTACTCTGCCCAGCGCGCCCGTTTCGAGAAGCTCTACTGGATCATCAACA
ACAAGGAAAGCCGCGCGATCAACAAGGCCGTCCACGCCTACGTCGACCGC
TTCGTCACCGCCGCCCTCAACTCCGACCCCGAGAAGAAACCCACCGGCCA
CTATGTCTTCCTGCACGGTCTGGCCGAGGCCACCCGCGACCCCGTCGAAC
TGCGCTCCCAGCTCCTTAACATCCTCCTTGCCGGTCGCGATACCACTGCC
TCCCTCCTCTCCTGGTGCGTCCTCTTCCTCGCCCGCCACCCGGCCTACTT
CTCCTCCCTGCGCGCCACCATCCTCGCGGAATTCGGCTCCTACTCGTCCC
CCCGTGACATCACCTTCGCCAATCTCAAGTCCTGCCGTCCCCTGCAGAAC
TTCCTCAATGAGGTCCTCCGTCTCTACCCTATTGTCCCTGGTAACCGTCG
CACGGCTGTCCGCAACACCACCCTCCCCACGGGCGGTGGTCCCGCGGGCA
CCGACCCCGTCTACGTCAAGAAGGGCCAGCCCGTCTTCTACAGCACTTAC
GTGATGCACCGTCGGCCTGATCTGTGGGGTGCTGATGCGGACGAGTTCCG
TCCGGATCGCTGGAACGAGCGCAAGGCCGGATGGGAGTACTTGCCGTTCA
ACGGTGGGCCGCGGATCTGCATTGGGCAGCAGTTCGCACTTACGGAGACG
GGGTATGTCCTGGTCAGACTGTTGCAGCGCTTCGATGTGATTGAGGGCGT
GGGCAAGACCAAAGAGGGGGAGATCAATATGCAGATGAGTTTGACGAATG
CGCCGGGAGATAATGTGACGGTGCGGTTGCATGAGGACGCTTCTAACTAG
ATGTCGACACTTTTGTTTGTCGCAACGGCCTCCCCCATCCTCTACCTGCT
ATATGTGCTGCTCTCTCGCTGGCAACATGCCCAAAATGCCCGTAAATGGA
ACTGTGGGAGTGTGCCCTCTTACCCCGGGGATCTGCTGGGCATCAACACC
CTGAAGGAGGCGCTGGCCATGGACAAGGCTCGCCAGGTGCCCACTGTGAC
CCGCCGGCGTGTTGAGACCATGTCCGCCCGCGAGAATCGCTATACCACCA
CTTTCCAATTCCGTCAACTGGGCACCGATGTCATCAGCACCTGCGATCCC
AAGAACGTCCAGGCCTTGCTGGCCACCCAGTTCAAGGACTTTGAATTGGG
TCAGTCCCGTCGCAACGCTCTGCACTGGCTGCTCGGCCGCGGCATC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0004497 | monooxygenase activity |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen |
| GO:0020037 | heme binding |
| GO:0005506 | iron ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007214-T1.utr3p1 | KJC3_007214-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007214-T1.utr5p1 | KJC3_007214-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017972 |
| DBxref | InterPro:IPR036396 |
| DBxref | InterPro:IPR001128 |
| DBxref | InterPro:IPR002402 |
| DBxref | InterPro:IPR002974 |
| DBxref | PFAM:PF00067 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1829787..1831794 - |
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