You are here

Home

KJC3_007217-T1, KJC3_007217-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007217-T1
Unique NameKJC3_007217-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1835692..1836575+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007217-T1 ID=KJC3_007217-T1|Name=KJC3_007217-T1|organism=Aspergillus niger KJC3|type=mRNA|length=884bp|location=Sequence derived from alignment at ch5:1835692..1836575+ (Aspergillus niger KJC3)
ATGTCCCTCCCACTTTTAACGCGCTCCTTGCGCGGGCCCCAGCTCAGCAA
AACCCTTCGCCACTCCCTCACCACCACAACCCGCTACCAATCCACCACTA
CCAACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACACTAACA
CCACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCACCCC
CAAAACCACACCGACCCTCAAAGACCTCCTCGACACCCCACCCTCCCCCG
CAAACCCAACAGAAGACCGCATCGACTGGACGCGCTCCTTCCACGGGCTC
AGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGCCCCGAC
CGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACCTCCCCG
AGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGTGGATGG
GGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGTGACGAG
GGAGTATGCGCTTGTTTGTAATGGGCGGTTAGTATTTCCCTATTTCTCTT
GGGGTGTGTGAGGGTGTGAGGTGTGTGGATGAATCAAGCTGACTACTTGT
GTGTTGCGTCTAGGTTGGTTTCAGTTGCGCGCGGCGAACAGGATTACTTC
TCTCCCGATGGAATCCCGACTGCTACGGAGGGATGTCGGTCGAATGCATT
GGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGAATTGTGGGATCCCA
GGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGGAGGCGTTTGTGGAG
CATGTGGTGAATAAACGGAAGACGAAGATTTGGGTGAGGAAGGATGATAC
GGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAG
back to top

Coding sequence (CDS) from alignment at ch5:1835692..1836575+

>KJC3_007217-T1 ID=KJC3_007217-T1|Name=KJC3_007217-T1|organism=Aspergillus niger KJC3|type=CDS|length=1596bp|location=Sequence derived from alignment at ch5:1835692..1836575+ (Aspergillus niger KJC3)
ATGTCCCTCCCACTTTTAACGCGCTCCTTGCGCGGGCCCCAGCTCAGCAA
AACCCTTCGCCACTCCCTCACCACCACAACCCGCTACCAATCCACCACTA
CCAACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACACTAACA
CCACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCACCCC
CAAAACCACACCGACCCTCAAAGACCTCCTCGACACCCCACCCTCCCCCG
CAAACCCAACAGAAGACCGCATCGACTGGACGCGCTCCTTCCACGGGCTC
AGCGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGCCCCGAC
CGACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACCTCCCCG
AGATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGTGGATGG
GGTCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGTGACGAG
GGAGTATGCGCTTGTTTGTAATGGGCGGTTGGTTTCAGTTGCGCGCGGCG
AACAGGATTACTTCTCTCCCGATGGAATCCCGACTGCTACGGAGGGATGT
CGGTCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGA
ATTGTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGG
AGGCGTTTGTGGAGCATGTGGTGAATAAACGGAAGACGAAGATTTGGGTG
AGGAAGGATGATACGGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAGAT
GTCCCTCCCACTTTTAACGCGCTCCTTGCGCGGGCCCCAGCTCAGCAAAA
CCCTTCGCCACTCCCTCACCACCACAACCCGCTACCAATCCACCACTACC
AACAACACCAAACCCGCCACCTCTACCTCCACAACATCAACACTAACACC
ACCCAAGCCCACCACTACCTCCTCTTCATCCTCCTCAACCTCCACCCCCA
AAACCACACCGACCCTCAAAGACCTCCTCGACACCCCACCCTCCCCCGCA
AACCCAACAGAAGACCGCATCGACTGGACGCGCTCCTTCCACGGGCTCAG
CGCGACGCCCTTCCCCAAAGAATGCGCCGACATCCTCCTCGCCCCGACCG
ACCCGGAAGAAGTCGAGATCAAGCCCGACGGCATCCTCTACCTCCCCGAG
ATCAAGTACCGACGGATACTGAATAAGGCGTTCGGACCCGGTGGATGGGG
TCTGGTGCCTCGGAGTGAGAGCATTGTTACGCCCAAGATGGTGACGAGGG
AGTATGCGCTTGTTTGTAATGGGCGGTTGGTTTCAGTTGCGCGCGGCGAA
CAGGATTACTTCTCTCCCGATGGAATCCCGACTGCTACGGAGGGATGTCG
GTCGAATGCATTGGTGCGGTGTTGTAAGGATCTGGGGATTGCGAGCGAAT
TGTGGGATCCCAGGTGGATTCGGAAGTTCAAGGCGCAGTATACGCGGGAG
GCGTTTGTGGAGCATGTGGTGAATAAACGGAAGACGAAGATTTGGGTGAG
GAAGGATGATACGGTTGGGTATCCGTGGAAGGAGACGAAGTTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000262mitochondrial chromosome
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000002mitochondrial genome maintenance
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007217KJC3_007217Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007217-T1.exon1KJC3_007217-T1.exon1Aspergillus niger KJC3exon
KJC3_007217-T1.exon2KJC3_007217-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007217-T1.cdsKJC3_007217-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007217-T1KJC3_007217-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926484N
DBxrefInterPro:IPR009446
DBxrefPFAM:PF06420
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1835692..1836575 +
Powered by Drupal