You are here

Home

KJC3_007223-T1, KJC3_007223-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007223-T1
Unique NameKJC3_007223-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1860717..1862453+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007223-T1 ID=KJC3_007223-T1|Name=KJC3_007223-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1737bp|location=Sequence derived from alignment at ch5:1860717..1862453+ (Aspergillus niger KJC3)
AAAGTGTCTGGTCTTCGGCTCTGAATGGCTGATCTTCGCTCTATGGACTC
TCTTGTTTCTATCATCTCCTCTTCGATCCCAGGCACGTTGGCTGGGCTGC
AATCTTCTCGCGAGTCTGCAAACGCAACTCGTCCACCTTAACTACCCTGC
GGGTCAATGAGCCTGAAGGCCCGAACAATTGCTCCGTATTGGATCCAACA
TCCAGCAGTGATTGTTTTGGTCGACCACGATGAAATACTTCAGGCCTGTC
TTTCGATGCGAGTTTGAGGGGGCGGCAGAGACGCAGCGGGTGACAAATGG
GAAGGATGTAAAAGTTGATACCGCTATCGTGGTGGCTACTGAAGATGTCT
CCGGGTACAGGGTCAAGGCGAGCCCGAAACTGGTGGACCGCTGGCTTGAT
GCGTCAGTCAGGCTGGCTGGGTCGGCCCCAGTCTTTCTATTCATCATCGC
TGGCCTGTTAACGTGGGCCTTGATGGGCATTCGTTTCGGCAACTCGGACG
TCTGGGTTGCTGCTATCTCCGACGTTCAAGCTATTTTATGTTATGTGTTC
GATTCTTTCCTCATGCGCCAGCTGCTCCGCGAGTACTCTGAGCAGCGCGA
AGCCGTAATTGAAATTCAGTCTCGGTGTAACAGTCATCAACGCATGATCG
CCAGTGTCAAGAAGAAGCTGGGAGCGGAAGGGATTCGTCGTGTTTCCGAG
AAGTGCAATGTTGAGCCTCTCGAAGCGCTGGACCAGGGGCGCACGCAGTC
TCTCTTTGCCCGGTGCGTCATCGTCTCGGCCAAGACATTCGGACATGTTG
TCAGCGGCGGTCTCTACTGGGTCTGCATTTTCATCTGGCTGGGATTCGGC
CCGCATTGTGGTTGGTCGAATCGGTGGCAACTCTACATCAACGACGCGAC
ATCGGCGCTGATGGTACTAGTATTTGCGTTCCTGGCCTGCCTGCGGGAAT
GTTATGCCGAACATACGAATATCTGCCTGGACGCCATCTTCCGACTCGAT
GCGACTCTCGAGAAGGAGCTTCGTCGCCTCAGCGAGGATGACCTGCCGAA
CCAGATGGAGGTTTGGTTGCCTCCCAAGGAGAACTCCCTGCAGGTGTTGA
TCTTTTACTACGCCGACGTCATTGGCACCTTGGTCGGCATGATCTTCCTC
GTGCTGGTAATCATCGCCTGGGCAGCTGTCGGACCTGTCTTTCATTTTAA
CAGTAATTGGTGGCTGCTCATCGGCACGTATGCAGGGTTGGTTGGTCTGT
TCGACAGTTTCGTCCTCCGCAACATCCAAGGCAAGGTGCAACAGTACATC
CATCGTCAGATTCGGGTTGTGGAAAAGGGAGACTTGGGACTCTTCGCGGG
ACTGTCAGTGGCTATCCCTTCAACTGGAAGCACCAAGCGCCCGTCTCTGA
GCCAGCACGTCTCCCGCTGGATGAATGTCGTCAGCTCCCATCTTACAATG
GTTATCGCTGGCTTCTTCCTCACCATTGGTTGTCTTGTCGCTTCAAGCGC
GATGGAGTGGAGTCTCACTGGACAGTTGATTTCGAACGTGCCTCCCAGCA
TTATCGAGACATTCTTTATGATCATACTCATCACTGGTCAGAATGACGCG
GAGGCCAGCGCCCATATCGACCTGACAAACATCTACTACCGGCGCCAGCG
ACTGCTGTCTTTTATGAAGCATGCAAAGAAGCTCTGTGAAGAGCAGAAGC
TTTCCGAGGATGCTACGGTTTCTGCACCGTGAAACAC
back to top

Coding sequence (CDS) from alignment at ch5:1860717..1862453+

>KJC3_007223-T1 ID=KJC3_007223-T1|Name=KJC3_007223-T1|organism=Aspergillus niger KJC3|type=CDS|length=1503bp|location=Sequence derived from alignment at ch5:1860717..1862453+ (Aspergillus niger KJC3)
ATGAAATACTTCAGGCCTGTCTTTCGATGCGAGTTTGAGGGGGCGGCAGA
GACGCAGCGGGTGACAAATGGGAAGGATGTAAAAGTTGATACCGCTATCG
TGGTGGCTACTGAAGATGTCTCCGGGTACAGGGTCAAGGCGAGCCCGAAA
CTGGTGGACCGCTGGCTTGATGCGTCAGTCAGGCTGGCTGGGTCGGCCCC
AGTCTTTCTATTCATCATCGCTGGCCTGTTAACGTGGGCCTTGATGGGCA
TTCGTTTCGGCAACTCGGACGTCTGGGTTGCTGCTATCTCCGACGTTCAA
GCTATTTTATGTTATGTGTTCGATTCTTTCCTCATGCGCCAGCTGCTCCG
CGAGTACTCTGAGCAGCGCGAAGCCGTAATTGAAATTCAGTCTCGGTGTA
ACAGTCATCAACGCATGATCGCCAGTGTCAAGAAGAAGCTGGGAGCGGAA
GGGATTCGTCGTGTTTCCGAGAAGTGCAATGTTGAGCCTCTCGAAGCGCT
GGACCAGGGGCGCACGCAGTCTCTCTTTGCCCGGTGCGTCATCGTCTCGG
CCAAGACATTCGGACATGTTGTCAGCGGCGGTCTCTACTGGGTCTGCATT
TTCATCTGGCTGGGATTCGGCCCGCATTGTGGTTGGTCGAATCGGTGGCA
ACTCTACATCAACGACGCGACATCGGCGCTGATGGTACTAGTATTTGCGT
TCCTGGCCTGCCTGCGGGAATGTTATGCCGAACATACGAATATCTGCCTG
GACGCCATCTTCCGACTCGATGCGACTCTCGAGAAGGAGCTTCGTCGCCT
CAGCGAGGATGACCTGCCGAACCAGATGGAGGTTTGGTTGCCTCCCAAGG
AGAACTCCCTGCAGGTGTTGATCTTTTACTACGCCGACGTCATTGGCACC
TTGGTCGGCATGATCTTCCTCGTGCTGGTAATCATCGCCTGGGCAGCTGT
CGGACCTGTCTTTCATTTTAACAGTAATTGGTGGCTGCTCATCGGCACGT
ATGCAGGGTTGGTTGGTCTGTTCGACAGTTTCGTCCTCCGCAACATCCAA
GGCAAGGTGCAACAGTACATCCATCGTCAGATTCGGGTTGTGGAAAAGGG
AGACTTGGGACTCTTCGCGGGACTGTCAGTGGCTATCCCTTCAACTGGAA
GCACCAAGCGCCCGTCTCTGAGCCAGCACGTCTCCCGCTGGATGAATGTC
GTCAGCTCCCATCTTACAATGGTTATCGCTGGCTTCTTCCTCACCATTGG
TTGTCTTGTCGCTTCAAGCGCGATGGAGTGGAGTCTCACTGGACAGTTGA
TTTCGAACGTGCCTCCCAGCATTATCGAGACATTCTTTATGATCATACTC
ATCACTGGTCAGAATGACGCGGAGGCCAGCGCCCATATCGACCTGACAAA
CATCTACTACCGGCGCCAGCGACTGCTGTCTTTTATGAAGCATGCAAAGA
AGCTCTGTGAAGAGCAGAAGCTTTCCGAGGATGCTACGGTTTCTGCACCG
TGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007223KJC3_007223Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007223-T1.utr5p1KJC3_007223-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007223-T1.exon1KJC3_007223-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007223-T1.cdsKJC3_007223-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007223-T1.utr3p1KJC3_007223-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007223-T1KJC3_007223-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007251
DBxrefPFAM:PF04120
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1860717..1862453 +
Powered by Drupal