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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1864499..1865502- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007224-T1 ID=KJC3_007224-T1|Name=KJC3_007224-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1004bp|location=Sequence derived from alignment at ch5:1864499..1865502- (Aspergillus niger KJC3)
ATCTTCAACACTGTGACGGTTCTTTCTTGCATGATATCGAACGTTCGAAC
AGATCCCTGGTCGGCACGATTAATAACTCTCTTCACTTATATATATTGTA
TTTGGAACTCAGGAAAGTACCCTTTTCTGGCACACACCGTCAGAACCTTG
GATCGAGATTATCATCACTATCTAGAACATTAACCATGAACGTCAGCCCG
AACCGCTCCATCGTCATCATCGGCGTGGGATTGGCCATGTCCCGCTCGCT
TGCCCTCTGGCTCGCAAACGTGGGCTGGAACATTGCCCTCATATCTCGCT
CTGAGAAAACCCTGTCCAACATCGCCGATGAGGTCAAAGCCGCTCAGAAA
AGCGCAAACGCCAAGGTGATCTACCGTACCGCCGATGCCGGCAACCCCGA
TAGTTTGACAAGCGCCCTGGACTGGTGTGCTCAACAGTTTGGTGGCAAGC
TTGATGTCTTGAATTACAATGCCGCCCATGTCGCTCAGTCACACATTACG
GAAGTCACTCCGGAGAGGCTGAATCTCGACCTCCAAGTCTCTGCGGTGGG
TACCCTCGTCGCAGGCCAGTGGTTCACCCGCAATGCCAACACCGACCGTG
TCTCTAAGGGTGAGTGGCCGCTCTTCCTGGTCACTGGCGGCACGCTTGAT
AAGGAGCCGCAGGTGGTGGTCTCTTCACTGTGTGCTGCTAAGGCAGCATC
GCAAACTCTCAGCCGCCTCTTTGCACAGGCGCTTCCGCAGGAGGCTCAGA
TTGTGGTCGGCATGCCGCTGATTAGAGCAAGCATTGTTAACCCGGAGACT
GGCGGCTATACTGAGGGATATCATCCTGATTATATCATCCAAGCGGTGTT
CAAGCCCTTCTTTGAAGTCCGCGAGAAGCTGCAGGATGGACTAGACAAGT
GGACAGTGGAACGTGTTATCTGATCATAGCAAGAACACATGTAAGGAAGG
GGGTTACCATCAATTGATACAAGATACATTATCGAGAATAATCCTCCGCA
GACG back to topCoding sequence (CDS) from alignment at ch5:1864499..1865502- >KJC3_007224-T1 ID=KJC3_007224-T1|Name=KJC3_007224-T1|organism=Aspergillus niger KJC3|type=CDS|length=738bp|location=Sequence derived from alignment at ch5:1864499..1865502- (Aspergillus niger KJC3)
ATGAACGTCAGCCCGAACCGCTCCATCGTCATCATCGGCGTGGGATTGGC
CATGTCCCGCTCGCTTGCCCTCTGGCTCGCAAACGTGGGCTGGAACATTG
CCCTCATATCTCGCTCTGAGAAAACCCTGTCCAACATCGCCGATGAGGTC
AAAGCCGCTCAGAAAAGCGCAAACGCCAAGGTGATCTACCGTACCGCCGA
TGCCGGCAACCCCGATAGTTTGACAAGCGCCCTGGACTGGTGTGCTCAAC
AGTTTGGTGGCAAGCTTGATGTCTTGAATTACAATGCCGCCCATGTCGCT
CAGTCACACATTACGGAAGTCACTCCGGAGAGGCTGAATCTCGACCTCCA
AGTCTCTGCGGTGGGTACCCTCGTCGCAGGCCAGTGGTTCACCCGCAATG
CCAACACCGACCGTGTCTCTAAGGGTGAGTGGCCGCTCTTCCTGGTCACT
GGCGGCACGCTTGATAAGGAGCCGCAGGTGGTGGTCTCTTCACTGTGTGC
TGCTAAGGCAGCATCGCAAACTCTCAGCCGCCTCTTTGCACAGGCGCTTC
CGCAGGAGGCTCAGATTGTGGTCGGCATGCCGCTGATTAGAGCAAGCATT
GTTAACCCGGAGACTGGCGGCTATACTGAGGGATATCATCCTGATTATAT
CATCCAAGCGGTGTTCAAGCCCTTCTTTGAAGTCCGCGAGAAGCTGCAGG
ATGGACTAGACAAGTGGACAGTGGAACGTGTTATCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007224-T1.utr3p1 | KJC3_007224-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007224-T1.utr5p1 | KJC3_007224-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1864499..1865502 - |
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