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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1868354..1870053+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007226-T1 ID=KJC3_007226-T1|Name=KJC3_007226-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1700bp|location=Sequence derived from alignment at ch5:1868354..1870053+ (Aspergillus niger KJC3)
TATTGACTCGCATTTGTGAGCATCTAGAGCCTCAAGAGTGGGGTGCGCTT
CGGATTACATGCCACCAAATATATGGCAATACACTGGAGGCCTATGCGAC
GCGCTACTTCAAAATTCTCTCACTTCTTCTTACTCGTGATAGCCTTGGCC
ATCTGGTGGAGGTTGCAGCAAGTGAAACTCTTCGGGATTGGGTTCAAGAA
ATTTGGATCATTCCTAATTTGTTTGAGGGTTGGCCACAAAAGGATAAGGA
GAATTTCAAAAGCTTGGGTTTGTCAATGAGGAAACAGAGAAGAATGTTAA
GAATGATGCGCGGTGAAAAGGAGGAATCAACATCAACCAATGCTGAGGCT
GAGCTTGACGCTCTATTTGCCGCTTACGAAGGTACATTAGCAGAGCACCG
TGCTATCCTTGACTCAGAACTTCTTGGGGTCCTTGAAGAATGCCTGCCGC
GCCTCAAGAACGTCACCACGGTCGGATTACGGTCTTACCCCCTTGAATTC
CTCCTCTCGAAAGCAAACTATCGTTCATTTCGCTGCCTTGGCTTACGGGA
ATTGAAGAAGTTCAGCACCGATGATGTACGTGGTCATTTGACATTCGCAA
GTTTTCGCAAGGATATGTTGTCCCCGCCTTTTGGCTTGGCAATCTCACAG
GTGCTTCATGCCATAATTAAATCCAATCGGAAGGTCCGATCCCTCCATAC
GTGCGGCAATTACGCTTGCGGGATGAACTTGGGGTCCTTGAAATTGCCAG
AGTCAAGGTATAGATTACTGTTGCCACTCTTGAGCGATCTGACGGCTCTT
CATATGTGTATCCGCATTAAGGATCACGAACAAGATAAATTCGAGGAAGA
GACCTTCAAACGTCTTCTCAATATTCTGGTCACAGTTGCACCAAAATTGA
AGATACTGACATTTGCCCAATGGAGCCCCTGGGAAGAATTATCCCCCCTG
TACTTTGAGGATCTCTCCGAGAAGATCCGGTTTTCCCAGCTAGAGGAAAT
TCATCTCCACTCGATTGAGGTGACAGTGGATACGCTTAGACAATTTCTTC
AAACAGCAGCGCCAACCTTGAAACGGCTGAGTATGAATATGGTCAGCTTG
ACGGATGCGATAATTGCAGCGCGAGATCCAGGGCCAATCACTGAAGAGAG
AAGTAGTTGGGGCTCTTCATTGTCCACTGAAGTGATAAACGAGATAAAGA
TGCTCTGGATGCGGAGCTTTCAGTTTCTGGCAGATAATCTGGAGCTGCAA
TTTGTCCAGTTGTCTAAACTTGGTTACCGTGGAAGAGAGATAAAGCTGCA
AGATGACTTATATATGGAACGTGGGCAGCCGGATGCACAGCCGGATTCAT
GTGCACGGCCTTCTATCGAACCGCACGATTTCTATTCTGATCCAAAGGGT
GGCCAATCGCTAGATTTCTATTTTGATGCTGAGAGAGCGAGTATACCTCT
CACACGATGGATCATGCAGCTTCAAATAGAGATGTGCAATCCGTTGAGCC
GTGCACCTTGCCGACTCCCAGGGACCAGCGGTATGAGCTTCAATCGGGAA
GGGATGAGGTCCCTTATTATGTACCCACCAGGGCATGTGCCAGTGGAAGA
TCCTGGAAGACGGTCGGCGATTTTAGAGTTCTAGATATGTTGGATAAGCA
AGGATACGATGAAGCGTCGATGACAATTACAATAGACTCGTCCCTCTGAG
back to topCoding sequence (CDS) from alignment at ch5:1868354..1870053+ >KJC3_007226-T1 ID=KJC3_007226-T1|Name=KJC3_007226-T1|organism=Aspergillus niger KJC3|type=CDS|length=1359bp|location=Sequence derived from alignment at ch5:1868354..1870053+ (Aspergillus niger KJC3)
ATGAGGAAACAGAGAAGAATGTTAAGAATGATGCGCGGTGAAAAGGAGGA
ATCAACATCAACCAATGCTGAGGCTGAGCTTGACGCTCTATTTGCCGCTT
ACGAAGGTACATTAGCAGAGCACCGTGCTATCCTTGACTCAGAACTTCTT
GGGGTCCTTGAAGAATGCCTGCCGCGCCTCAAGAACGTCACCACGGTCGG
ATTACGGTCTTACCCCCTTGAATTCCTCCTCTCGAAAGCAAACTATCGTT
CATTTCGCTGCCTTGGCTTACGGGAATTGAAGAAGTTCAGCACCGATGAT
GTACGTGGTCATTTGACATTCGCAAGTTTTCGCAAGGATATGTTGTCCCC
GCCTTTTGGCTTGGCAATCTCACAGGTGCTTCATGCCATAATTAAATCCA
ATCGGAAGGTCCGATCCCTCCATACGTGCGGCAATTACGCTTGCGGGATG
AACTTGGGGTCCTTGAAATTGCCAGAGTCAAGGTATAGATTACTGTTGCC
ACTCTTGAGCGATCTGACGGCTCTTCATATGTGTATCCGCATTAAGGATC
ACGAACAAGATAAATTCGAGGAAGAGACCTTCAAACGTCTTCTCAATATT
CTGGTCACAGTTGCACCAAAATTGAAGATACTGACATTTGCCCAATGGAG
CCCCTGGGAAGAATTATCCCCCCTGTACTTTGAGGATCTCTCCGAGAAGA
TCCGGTTTTCCCAGCTAGAGGAAATTCATCTCCACTCGATTGAGGTGACA
GTGGATACGCTTAGACAATTTCTTCAAACAGCAGCGCCAACCTTGAAACG
GCTGAGTATGAATATGGTCAGCTTGACGGATGCGATAATTGCAGCGCGAG
ATCCAGGGCCAATCACTGAAGAGAGAAGTAGTTGGGGCTCTTCATTGTCC
ACTGAAGTGATAAACGAGATAAAGATGCTCTGGATGCGGAGCTTTCAGTT
TCTGGCAGATAATCTGGAGCTGCAATTTGTCCAGTTGTCTAAACTTGGTT
ACCGTGGAAGAGAGATAAAGCTGCAAGATGACTTATATATGGAACGTGGG
CAGCCGGATGCACAGCCGGATTCATGTGCACGGCCTTCTATCGAACCGCA
CGATTTCTATTCTGATCCAAAGGGTGGCCAATCGCTAGATTTCTATTTTG
ATGCTGAGAGAGCGAGTATACCTCTCACACGATGGATCATGCAGCTTCAA
ATAGAGATGTGCAATCCGTTGAGCCGTGCACCTTGCCGACTCCCAGGGAC
CAGCGGTATGAGCTTCAATCGGGAAGGGATGAGGTCCCTTATTATGTACC
CACCAGGGCATGTGCCAGTGGAAGATCCTGGAAGACGGTCGGCGATTTTA
GAGTTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007226-T1.utr5p1 | KJC3_007226-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007226-T1.utr3p1 | KJC3_007226-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1868354..1870053 + |
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