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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1876496..1877674+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007229-T1 ID=KJC3_007229-T1|Name=KJC3_007229-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1179bp|location=Sequence derived from alignment at ch5:1876496..1877674+ (Aspergillus niger KJC3)
ATGGCTGAAGCTCAAATGTTGAAGGTGGCTCTTGTCCGCTGTCCGCCGCC
AAACTGGCCTCTTCCATTGCAGAATCGCGACTGGACCGGGATCAAAATCG
ATATCTCACAAACTATTGAAGTTAGTTTACGCCTAATGCGCGAAGCCAAA
GATGCTGGTGTCACCTTGATAACGTTTCCTGAACTTTGGTTCCCCGGGTC
TGTTTCCCTTCATGTGCCCTTTTATTTCCCAGCAGCCACATTTAGCTAAC
TCTACCTACGCAGATTTCCCAAATGGAGGGAACAAAATGACTGGAAGAAA
ACTCATCTGGCCTCCTACATTGAGAACTCCTTGGAGATAGGGAGTCGCGA
GTGGAATACGTTAATTGATGGGATAAAGTCCGTGGGTATCTGGGCGGCTG
TGGCATTTTCCGAACGATCTGCGAACCATATCTATATGGCCCAGGCACTG
ATTTCCAAAGATGGCGAGGTGGTTATGCATCGTCGGAAGCTTAGACCATC
TGGTTCAGAACGGGATATGTTTAGCGATGGCACAGTCGACCAGCTCAAAG
TAGTAAACACCCCCTTGGGTCGTGTTGGCATGCTTCAGTGTGGCGAGTAT
GGCTCTCCCTGTGTCGATCCGAAATCCTTCTTCGACGGGGTGTAGATAAT
CAAGGCGCTGACTCATTATGACAGACACTTTTATCCAAGCATGAATTTCA
TCATGGCTGCTCAACGCCCAAAGCTCCACATCGGCGCATGGCCCTTTGCT
ATGGATTTCGGTGACGATAGCGACAGCATATTCTACAATGCCTCCCTTGT
GACCCGCGGCGCTGGATCTTATGCCCTCAACAGCGGCGCATACGTCCTGA
TGCCATCGATCGGCTACTGCTTCATATACGATCCCATGATGCGTATTGTG
GCCGCCATGGACAACACTGTCGACTACCAGGAACACCCTATCTTATACCA
CACTTTAGACGGAAGTGAACTACACGGCACTCAGGATCATGACCCCAATG
CACAAGCTTCCTGGGCTGTTCTGCAGCAACTGAATGATGCATTCCCAGTA
ACCATACCTCGCGAGCAGGGCTCGTTGGTGCCGCGACGCGAGAAAAGCGT
CCAATACCTGACTTCCGCGGAAATGAGATGGTCCGAAATTGCCCCTGGAA
CACCCTGGCCAGAACATCTTGCTCAATAA back to topCoding sequence (CDS) from alignment at ch5:1876496..1877674+ >KJC3_007229-T1 ID=KJC3_007229-T1|Name=KJC3_007229-T1|organism=Aspergillus niger KJC3|type=CDS|length=3105bp|location=Sequence derived from alignment at ch5:1876496..1877674+ (Aspergillus niger KJC3)
ATGGCTGAAGCTCAAATGTTGAAGGTGGCTCTTGTCCGCTGTCCGCCGCC
AAACTGGCCTCTTCCATTGCAGAATCGCGACTGGACCGGGATCAAAATCG
ATATCTCACAAACTATTGAAGTTAGTTTACGCCTAATGCGCGAAGCCAAA
GATGCTGGTGTCACCTTGATAACGTTTCCTGAACTTTGGTTCCCCGGATT
TCCCAAATGGAGGGAACAAAATGACTGGAAGAAAACTCATCTGGCCTCCT
ACATTGAGAACTCCTTGGAGATAGGGAGTCGCGAGTGGAATACGTTAATT
GATGGGATAAAGTCCGTGGGTATCTGGGCGGCTGTGGCATTTTCCGAACG
ATCTGCGAACCATATCTATATGGCCCAGGCACTGATTTCCAAAGATGGCG
AGGTGGTTATGCATCGTCGGAAGCTTAGACCATCTGGTTCAGAACGGGAT
ATGTTTAGCGATGGCACAGTCGACCAGCTCAAAGTAGTAAACACCCCCTT
GGGTCGTGTTGGCATGCTTCAGTGTGGCGAACACTTTTATCCAAGCATGA
ATTTCATCATGGCTGCTCAACGCCCAAAGCTCCACATCGGCGCATGGCCC
TTTGCTATGGATTTCGGTGACGATAGCGACAGCATATTCTACAATGCCTC
CCTTGTGACCCGCGGCGCTGGATCTTATGCCCTCAACAGCGGCGCATACG
TCCTGATGCCATCGATCGGCTACTGCTTCATATACGATCCCATGATGCGT
ATTGTGGCCGCCATGGACAACACTGTCGACTACCAGGAACACCCTATCTT
ATACCACACTTTAGACGGAAGTGAACTACACGGCACTCAGGATCATGACC
CCAATGCACAAGCTTCCTGGGCTGTTCTGCAGCAACTGAATGATGCATTC
CCAGTAACCATACCTCGCGAGCAGGGCTCGTTGGTGCCGCGACGCGAGAA
AAGCGTCCAATACCTGACTTCCGCGGAAATGAGATGGTCCGAAATTGCCC
CTGGAACACCCTGGCCAGAACATCTTGCTCAATAAATGGCTGAAGCTCAA
ATGTTGAAGGTGGCTCTTGTCCGCTGTCCGCCGCCAAACTGGCCTCTTCC
ATTGCAGAATCGCGACTGGACCGGGATCAAAATCGATATCTCACAAACTA
TTGAAGTTAGTTTACGCCTAATGCGCGAAGCCAAAGATGCTGGTGTCACC
TTGATAACGTTTCCTGAACTTTGGTTCCCCGGATTTCCCAAATGGAGGGA
ACAAAATGACTGGAAGAAAACTCATCTGGCCTCCTACATTGAGAACTCCT
TGGAGATAGGGAGTCGCGAGTGGAATACGTTAATTGATGGGATAAAGTCC
GTGGGTATCTGGGCGGCTGTGGCATTTTCCGAACGATCTGCGAACCATAT
CTATATGGCCCAGGCACTGATTTCCAAAGATGGCGAGGTGGTTATGCATC
GTCGGAAGCTTAGACCATCTGGTTCAGAACGGGATATGTTTAGCGATGGC
ACAGTCGACCAGCTCAAAGTAGTAAACACCCCCTTGGGTCGTGTTGGCAT
GCTTCAGTGTGGCGAACACTTTTATCCAAGCATGAATTTCATCATGGCTG
CTCAACGCCCAAAGCTCCACATCGGCGCATGGCCCTTTGCTATGGATTTC
GGTGACGATAGCGACAGCATATTCTACAATGCCTCCCTTGTGACCCGCGG
CGCTGGATCTTATGCCCTCAACAGCGGCGCATACGTCCTGATGCCATCGA
TCGGCTACTGCTTCATATACGATCCCATGATGCGTATTGTGGCCGCCATG
GACAACACTGTCGACTACCAGGAACACCCTATCTTATACCACACTTTAGA
CGGAAGTGAACTACACGGCACTCAGGATCATGACCCCAATGCACAAGCTT
CCTGGGCTGTTCTGCAGCAACTGAATGATGCATTCCCAGTAACCATACCT
CGCGAGCAGGGCTCGTTGGTGCCGCGACGCGAGAAAAGCGTCCAATACCT
GACTTCCGCGGAAATGAGATGGTCCGAAATTGCCCCTGGAACACCCTGGC
CAGAACATCTTGCTCAATAAATGGCTGAAGCTCAAATGTTGAAGGTGGCT
CTTGTCCGCTGTCCGCCGCCAAACTGGCCTCTTCCATTGCAGAATCGCGA
CTGGACCGGGATCAAAATCGATATCTCACAAACTATTGAAGTTAGTTTAC
GCCTAATGCGCGAAGCCAAAGATGCTGGTGTCACCTTGATAACGTTTCCT
GAACTTTGGTTCCCCGGATTTCCCAAATGGAGGGAACAAAATGACTGGAA
GAAAACTCATCTGGCCTCCTACATTGAGAACTCCTTGGAGATAGGGAGTC
GCGAGTGGAATACGTTAATTGATGGGATAAAGTCCGTGGGTATCTGGGCG
GCTGTGGCATTTTCCGAACGATCTGCGAACCATATCTATATGGCCCAGGC
ACTGATTTCCAAAGATGGCGAGGTGGTTATGCATCGTCGGAAGCTTAGAC
CATCTGGTTCAGAACGGGATATGTTTAGCGATGGCACAGTCGACCAGCTC
AAAGTAGTAAACACCCCCTTGGGTCGTGTTGGCATGCTTCAGTGTGGCGA
ACACTTTTATCCAAGCATGAATTTCATCATGGCTGCTCAACGCCCAAAGC
TCCACATCGGCGCATGGCCCTTTGCTATGGATTTCGGTGACGATAGCGAC
AGCATATTCTACAATGCCTCCCTTGTGACCCGCGGCGCTGGATCTTATGC
CCTCAACAGCGGCGCATACGTCCTGATGCCATCGATCGGCTACTGCTTCA
TATACGATCCCATGATGCGTATTGTGGCCGCCATGGACAACACTGTCGAC
TACCAGGAACACCCTATCTTATACCACACTTTAGACGGAAGTGAACTACA
CGGCACTCAGGATCATGACCCCAATGCACAAGCTTCCTGGGCTGTTCTGC
AGCAACTGAATGATGCATTCCCAGTAACCATACCTCGCGAGCAGGGCTCG
TTGGTGCCGCGACGCGAGAAAAGCGTCCAATACCTGACTTCCGCGGAAAT
GAGATGGTCCGAAATTGCCCCTGGAACACCCTGGCCAGAACATCTTGCTC
AATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036526 |
| DBxref | InterPro:IPR003010 |
| DBxref | PFAM:PF00795 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1876496..1877674 + |
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