|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1878499..1880454+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007230-T1 ID=KJC3_007230-T1|Name=KJC3_007230-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1956bp|location=Sequence derived from alignment at ch5:1878499..1880454+ (Aspergillus niger KJC3)
ATGTCTGATATAGCATGTTCACGCACGCCACTAACTAGATTCGATCCCGC
CACCATTGCCATACTCGATCGTTTAGCCGAAATCCAACAGTCTCTCAACT
CCTTGAATTCAGGGGAGGTGACGGCCCTGTCCCTGGATGGGCCGCAAAAA
GAGTACATGACCGACGTAGACCCACAAACACCACAGACTGTTTCTCTGAG
GATCCCTGCAGCCAAAATATGTCCTGATGCAATCTTATCCTGGCCGATTT
TGCGAGATGTCCGCTTGCAAACAAGCTTGAATAGTCTTACTCTCGCGGAC
CACGATCATGGTGTCGAAGAAGTTGCCAGCTCCGATTTGAATCTGGCCCT
CATACCAGGTCTGATTGATCGCTTCCTGCAGTTTGTGCACGTCAAAAACC
CCGTGGTGGATACGGTCGCCCTCCGTCAATCAGCCGTCACAGTTGAAGTG
GGAGAGTCGTCTCGGAATTCCCATTCCTGCTTAGTGGTGAGTAAAGGGTT
TTCCCTACTCCCCCCAGCCCATAATCCTGCTCGAGATAGATAGGCACCGG
CACCTCCGTTCCCACAGCCACGCTAAGAATTATTCTCAAGTTCCTCGCCT
GCGCTTTAGGCTGTCTAGCAGGTCCACTCCGATATGATGACCTCTCGGTG
GAACGTGATGACCACGCTGAATCACGTCACACTACAGGAGAGCAGTTTTA
TCGGAAAGCGTTGGAGAGTATCTCCCTCCCCGGCGATCGTATTCTGACGG
CACAATGCTGGTTTCTTAGCGGGGTCTATCAGATGTACAAGCTAAATGCC
GCTAGAGCTTGGATGGACTTTTCGCGCGCCTCCGCCGCCTTGAGCCTCCA
CCTACGACACAGGGAAGCAGCCGTATGTAAGGACTCAAACGGAGGGCACC
TGGAACCGGCAGAGCTGAGTCTTTACTGGACGTGTTGGAAGTCAGAATGG
TGGTTCCTATCCTTCGTTTCTCTTCTTCCAATTCCTTTGAGTAGCTGCCC
GACTCAGGATAAGGCTGATATTTGTAATTCTTTCCAGTGACTTACGCGCG
GAGCTCAACGTACCCGATTCGGTATTGTGTGAGTTCAGCGTATCCGATGG
GTATCCAGTACCCTCGTCGGTAAGCATGTCCAACTCCGGAGCAATGTTGT
CCGAGACGCCGACAGACTCAGAAGACTTGACACATCTCTGGGAGTTGTCC
ACGTACTACTACTTATCAGATGTTGCTCTAATGCGCGTAGAAGCGCGAAT
CCTTAACTCGATGTACAGCACTAACGACGCGCATTGGTCGCCTGCCAACC
CATCTTACTTGTGCCGAACAGCCGCGGATCTCGAGTCCCAAATAGATCAC
TGGTAAGTTGCCAAAGACGGTATTCTAGCTTTGTGCCTATACCACTTTGA
GTAGGAAGGGGCTCTCATGTACCTCGTTTATTGACTTACTTGGTGTCCGA
CGCCAGGTCCAGAAACCTACCATCTATTATCCGTTTCGAAGAATGGGACT
CGGCACCCCAGTTTGAGCTGACGTACAACCTGCAAGCACGGGTTTTGCAG
CTGAGATCGTGGCTCTACCGGCCGTTTGTATACTACGCTATTCATCATAA
CAGCGGGCAGAGTAATGAGGACGAGGAGGCTAAGAGGTTTATGCGAAAAG
CTATCGAGTGCAGTTTCCATCTTATCAGCTCCAAGGCAACGCAGCACCGA
CATCATGGAACCTGGTTTGTCGCTCGCGGTGTACTCAGCTCAGCCCTGTT
AATCATTGCAGCTATCAAGGCGGACAAGGGACTCGTGGACTATTTGGCAG
ATTGGCCGGACTTGTTAGACCAGGCGATAAGGTCTTTGAGTCATTGGGCG
TCGGAGGCGCGGGATCTAGCTTACGCGGTTGTCGTTCTCGCTAATCTTAA
GCAGAAATTGTGTCTTTAGCTGGTTGCACTATGTACCCTTCACTTGTATT
TCATGG back to topCoding sequence (CDS) from alignment at ch5:1878499..1880454+ >KJC3_007230-T1 ID=KJC3_007230-T1|Name=KJC3_007230-T1|organism=Aspergillus niger KJC3|type=CDS|length=6492bp|location=Sequence derived from alignment at ch5:1878499..1880454+ (Aspergillus niger KJC3)
ATGTCTGATATAGCATGTTCACGCACGCCACTAACTAGATTCGATCCCGC
CACCATTGCCATACTCGATCGTTTAGCCGAAATCCAACAGTCTCTCAACT
CCTTGAATTCAGGGGAGGTGACGGCCCTGTCCCTGGATGGGCCGCAAAAA
GAGTACATGACCGACGTAGACCCACAAACACCACAGACTGTTTCTCTGAG
GATCCCTGCAGCCAAAATATGTCCTGATGCAATCTTATCCTGGCCGATTT
TGCGAGATGTCCGCTTGCAAACAAGCTTGAATAGTCTTACTCTCGCGGAC
CACGATCATGGTGTCGAAGAAGTTGCCAGCTCCGATTTGAATCTGGCCCT
CATACCAGGTCTGATTGATCGCTTCCTGCAGTTTGTGCACGTCAAAAACC
CCGTGGTGGATACGGTCGCCCTCCGTCAATCAGCCGTCACAGTTGAAGTG
GGAGAGTCGTCTCGGAATTCCCATTCCTGCTTAGTGTTCCTCGCCTGCGC
TTTAGGCTGTCTAGCAGGTCCACTCCGATATGATGACCTCTCGGTGGAAC
GTGATGACCACGCTGAATCACGTCACACTACAGGAGAGCAGTTTTATCGG
AAAGCGTTGGAGAGTATCTCCCTCCCCGGCGATCGTATTCTGACGGCACA
ATGCTGGTTTCTTAGCGGGGTCTATCAGATGTACAAGCTAAATGCCGCTA
GAGCTTGGATGGACTTTTCGCGCGCCTCCGCCGCCTTGAGCCTCCACCTA
CGACACAGGGAAGCAGCCGTATGTAAGGACTCAAACGGAGGGCACCTGGA
ACCGGCAGAGCTGAGTCTTTACTGGACGTGTTGGAAGTCAGAATGTGACT
TACGCGCGGAGCTCAACGTACCCGATTCGGTATTGTGTGAGTTCAGCGTA
TCCGATGGGTATCCAGTACCCTCGTCGGTAAGCATGTCCAACTCCGGAGC
AATGTTGTCCGAGACGCCGACAGACTCAGAAGACTTGACACATCTCTGGG
AGTTGTCCACGTACTACTACTTATCAGATGTTGCTCTAATGCGCGTAGAA
GCGCGAATCCTTAACTCGATGTACAGCACTAACGACGCGCATTGGTCGCC
TGCCAACCCATCTTACTTGTGCCGAACAGCCGCGGATCTCGAGTCCCAAA
TAGATCACTGGTCCAGAAACCTACCATCTATTATCCGTTTCGAAGAATGG
GACTCGGCACCCCAGTTTGAGCTGACGTACAACCTGCAAGCACGGGTTTT
GCAGCTGAGATCGTGGCTCTACCGGCCGTTTGTATACTACGCTATTCATC
ATAACAGCGGGCAGAGTAATGAGGACGAGGAGGCTAAGAGGTTTATGCGA
AAAGCTATCGAGTGCAGTTTCCATCTTATCAGCTCCAAGGCAACGCAGCA
CCGACATCATGGAACCTGGTTTGTCGCTCGCGGTGTACTCAGCTCAGCCC
TGTTAATCATTGCAGCTATCAAGGCGGACAAGGGACTCGTGGACTATTTG
GCAGATTGGCCGGACTTGTTAGACCAGGCGATAAGGTCTTTGAGTCATTG
GGCGTCGGAGGCGCGGGATCTAGCTTACGCGGTTGTCGTTCTCGCTAATC
TTAAGCAGAAATTGTGTCTTTAGATGTCTGATATAGCATGTTCACGCACG
CCACTAACTAGATTCGATCCCGCCACCATTGCCATACTCGATCGTTTAGC
CGAAATCCAACAGTCTCTCAACTCCTTGAATTCAGGGGAGGTGACGGCCC
TGTCCCTGGATGGGCCGCAAAAAGAGTACATGACCGACGTAGACCCACAA
ACACCACAGACTGTTTCTCTGAGGATCCCTGCAGCCAAAATATGTCCTGA
TGCAATCTTATCCTGGCCGATTTTGCGAGATGTCCGCTTGCAAACAAGCT
TGAATAGTCTTACTCTCGCGGACCACGATCATGGTGTCGAAGAAGTTGCC
AGCTCCGATTTGAATCTGGCCCTCATACCAGGTCTGATTGATCGCTTCCT
GCAGTTTGTGCACGTCAAAAACCCCGTGGTGGATACGGTCGCCCTCCGTC
AATCAGCCGTCACAGTTGAAGTGGGAGAGTCGTCTCGGAATTCCCATTCC
TGCTTAGTGTTCCTCGCCTGCGCTTTAGGCTGTCTAGCAGGTCCACTCCG
ATATGATGACCTCTCGGTGGAACGTGATGACCACGCTGAATCACGTCACA
CTACAGGAGAGCAGTTTTATCGGAAAGCGTTGGAGAGTATCTCCCTCCCC
GGCGATCGTATTCTGACGGCACAATGCTGGTTTCTTAGCGGGGTCTATCA
GATGTACAAGCTAAATGCCGCTAGAGCTTGGATGGACTTTTCGCGCGCCT
CCGCCGCCTTGAGCCTCCACCTACGACACAGGGAAGCAGCCGTATGTAAG
GACTCAAACGGAGGGCACCTGGAACCGGCAGAGCTGAGTCTTTACTGGAC
GTGTTGGAAGTCAGAATGTGACTTACGCGCGGAGCTCAACGTACCCGATT
CGGTATTGTGTGAGTTCAGCGTATCCGATGGGTATCCAGTACCCTCGTCG
GTAAGCATGTCCAACTCCGGAGCAATGTTGTCCGAGACGCCGACAGACTC
AGAAGACTTGACACATCTCTGGGAGTTGTCCACGTACTACTACTTATCAG
ATGTTGCTCTAATGCGCGTAGAAGCGCGAATCCTTAACTCGATGTACAGC
ACTAACGACGCGCATTGGTCGCCTGCCAACCCATCTTACTTGTGCCGAAC
AGCCGCGGATCTCGAGTCCCAAATAGATCACTGGTCCAGAAACCTACCAT
CTATTATCCGTTTCGAAGAATGGGACTCGGCACCCCAGTTTGAGCTGACG
TACAACCTGCAAGCACGGGTTTTGCAGCTGAGATCGTGGCTCTACCGGCC
GTTTGTATACTACGCTATTCATCATAACAGCGGGCAGAGTAATGAGGACG
AGGAGGCTAAGAGGTTTATGCGAAAAGCTATCGAGTGCAGTTTCCATCTT
ATCAGCTCCAAGGCAACGCAGCACCGACATCATGGAACCTGGTTTGTCGC
TCGCGGTGTACTCAGCTCAGCCCTGTTAATCATTGCAGCTATCAAGGCGG
ACAAGGGACTCGTGGACTATTTGGCAGATTGGCCGGACTTGTTAGACCAG
GCGATAAGGTCTTTGAGTCATTGGGCGTCGGAGGCGCGGGATCTAGCTTA
CGCGGTTGTCGTTCTCGCTAATCTTAAGCAGAAATTGTGTCTTTAGATGT
CTGATATAGCATGTTCACGCACGCCACTAACTAGATTCGATCCCGCCACC
ATTGCCATACTCGATCGTTTAGCCGAAATCCAACAGTCTCTCAACTCCTT
GAATTCAGGGGAGGTGACGGCCCTGTCCCTGGATGGGCCGCAAAAAGAGT
ACATGACCGACGTAGACCCACAAACACCACAGACTGTTTCTCTGAGGATC
CCTGCAGCCAAAATATGTCCTGATGCAATCTTATCCTGGCCGATTTTGCG
AGATGTCCGCTTGCAAACAAGCTTGAATAGTCTTACTCTCGCGGACCACG
ATCATGGTGTCGAAGAAGTTGCCAGCTCCGATTTGAATCTGGCCCTCATA
CCAGGTCTGATTGATCGCTTCCTGCAGTTTGTGCACGTCAAAAACCCCGT
GGTGGATACGGTCGCCCTCCGTCAATCAGCCGTCACAGTTGAAGTGGGAG
AGTCGTCTCGGAATTCCCATTCCTGCTTAGTGTTCCTCGCCTGCGCTTTA
GGCTGTCTAGCAGGTCCACTCCGATATGATGACCTCTCGGTGGAACGTGA
TGACCACGCTGAATCACGTCACACTACAGGAGAGCAGTTTTATCGGAAAG
CGTTGGAGAGTATCTCCCTCCCCGGCGATCGTATTCTGACGGCACAATGC
TGGTTTCTTAGCGGGGTCTATCAGATGTACAAGCTAAATGCCGCTAGAGC
TTGGATGGACTTTTCGCGCGCCTCCGCCGCCTTGAGCCTCCACCTACGAC
ACAGGGAAGCAGCCGTATGTAAGGACTCAAACGGAGGGCACCTGGAACCG
GCAGAGCTGAGTCTTTACTGGACGTGTTGGAAGTCAGAATGTGACTTACG
CGCGGAGCTCAACGTACCCGATTCGGTATTGTGTGAGTTCAGCGTATCCG
ATGGGTATCCAGTACCCTCGTCGGTAAGCATGTCCAACTCCGGAGCAATG
TTGTCCGAGACGCCGACAGACTCAGAAGACTTGACACATCTCTGGGAGTT
GTCCACGTACTACTACTTATCAGATGTTGCTCTAATGCGCGTAGAAGCGC
GAATCCTTAACTCGATGTACAGCACTAACGACGCGCATTGGTCGCCTGCC
AACCCATCTTACTTGTGCCGAACAGCCGCGGATCTCGAGTCCCAAATAGA
TCACTGGTCCAGAAACCTACCATCTATTATCCGTTTCGAAGAATGGGACT
CGGCACCCCAGTTTGAGCTGACGTACAACCTGCAAGCACGGGTTTTGCAG
CTGAGATCGTGGCTCTACCGGCCGTTTGTATACTACGCTATTCATCATAA
CAGCGGGCAGAGTAATGAGGACGAGGAGGCTAAGAGGTTTATGCGAAAAG
CTATCGAGTGCAGTTTCCATCTTATCAGCTCCAAGGCAACGCAGCACCGA
CATCATGGAACCTGGTTTGTCGCTCGCGGTGTACTCAGCTCAGCCCTGTT
AATCATTGCAGCTATCAAGGCGGACAAGGGACTCGTGGACTATTTGGCAG
ATTGGCCGGACTTGTTAGACCAGGCGATAAGGTCTTTGAGTCATTGGGCG
TCGGAGGCGCGGGATCTAGCTTACGCGGTTGTCGTTCTCGCTAATCTTAA
GCAGAAATTGTGTCTTTAGATGTCTGATATAGCATGTTCACGCACGCCAC
TAACTAGATTCGATCCCGCCACCATTGCCATACTCGATCGTTTAGCCGAA
ATCCAACAGTCTCTCAACTCCTTGAATTCAGGGGAGGTGACGGCCCTGTC
CCTGGATGGGCCGCAAAAAGAGTACATGACCGACGTAGACCCACAAACAC
CACAGACTGTTTCTCTGAGGATCCCTGCAGCCAAAATATGTCCTGATGCA
ATCTTATCCTGGCCGATTTTGCGAGATGTCCGCTTGCAAACAAGCTTGAA
TAGTCTTACTCTCGCGGACCACGATCATGGTGTCGAAGAAGTTGCCAGCT
CCGATTTGAATCTGGCCCTCATACCAGGTCTGATTGATCGCTTCCTGCAG
TTTGTGCACGTCAAAAACCCCGTGGTGGATACGGTCGCCCTCCGTCAATC
AGCCGTCACAGTTGAAGTGGGAGAGTCGTCTCGGAATTCCCATTCCTGCT
TAGTGTTCCTCGCCTGCGCTTTAGGCTGTCTAGCAGGTCCACTCCGATAT
GATGACCTCTCGGTGGAACGTGATGACCACGCTGAATCACGTCACACTAC
AGGAGAGCAGTTTTATCGGAAAGCGTTGGAGAGTATCTCCCTCCCCGGCG
ATCGTATTCTGACGGCACAATGCTGGTTTCTTAGCGGGGTCTATCAGATG
TACAAGCTAAATGCCGCTAGAGCTTGGATGGACTTTTCGCGCGCCTCCGC
CGCCTTGAGCCTCCACCTACGACACAGGGAAGCAGCCGTATGTAAGGACT
CAAACGGAGGGCACCTGGAACCGGCAGAGCTGAGTCTTTACTGGACGTGT
TGGAAGTCAGAATGTGACTTACGCGCGGAGCTCAACGTACCCGATTCGGT
ATTGTGTGAGTTCAGCGTATCCGATGGGTATCCAGTACCCTCGTCGGTAA
GCATGTCCAACTCCGGAGCAATGTTGTCCGAGACGCCGACAGACTCAGAA
GACTTGACACATCTCTGGGAGTTGTCCACGTACTACTACTTATCAGATGT
TGCTCTAATGCGCGTAGAAGCGCGAATCCTTAACTCGATGTACAGCACTA
ACGACGCGCATTGGTCGCCTGCCAACCCATCTTACTTGTGCCGAACAGCC
GCGGATCTCGAGTCCCAAATAGATCACTGGTCCAGAAACCTACCATCTAT
TATCCGTTTCGAAGAATGGGACTCGGCACCCCAGTTTGAGCTGACGTACA
ACCTGCAAGCACGGGTTTTGCAGCTGAGATCGTGGCTCTACCGGCCGTTT
GTATACTACGCTATTCATCATAACAGCGGGCAGAGTAATGAGGACGAGGA
GGCTAAGAGGTTTATGCGAAAAGCTATCGAGTGCAGTTTCCATCTTATCA
GCTCCAAGGCAACGCAGCACCGACATCATGGAACCTGGTTTGTCGCTCGC
GGTGTACTCAGCTCAGCCCTGTTAATCATTGCAGCTATCAAGGCGGACAA
GGGACTCGTGGACTATTTGGCAGATTGGCCGGACTTGTTAGACCAGGCGA
TAAGGTCTTTGAGTCATTGGGCGTCGGAGGCGCGGGATCTAGCTTACGCG
GTTGTCGTTCTCGCTAATCTTAAGCAGAAATTGTGTCTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007230-T1.utr3p1 | KJC3_007230-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1878499..1880454 + |
|
