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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1885690..1887173+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007233-T1 ID=KJC3_007233-T1|Name=KJC3_007233-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1484bp|location=Sequence derived from alignment at ch5:1885690..1887173+ (Aspergillus niger KJC3)
ACTCAATGCATCCCACCCCCACGTTATATATATACTGAAACCGCCCAACC
CCAACAGCACGACTAACAAGCACACCCCTTCACAATGCCCCAGTCCACAG
AAACAAATCAGAACCTTCCACCCCTCCACACCTACACCATCGCCTACATC
ACCGCCCTCCCCAAAGAACAAACCGCCGTCCTCGCCACCCTCGACACCAT
CCACCACCAGCACATCCCTACTCCCGCAAGCGACAAAAACACCTACACCC
TCGGCTCCATATCACCGCACAACATCGTCTTAATCTGCCTCCCCACCATG
GGAACAACCGCCGCCGCAAGCGCAGTGACATCTCTTCTTCACATGTTCCC
GTCCATCAGGTTCGTTCTGCTCGTTGGCGTGGCGGGCGGTATTCCGAGCA
ATGGAGTACGATTGGGTGATGTGGTTGTTAGTGTGCCGGTTAGTGGTGGG
TATGGGGGTGTGGTGGGGTGGGATATGGGGAAATTAGTAGCTGGGGGTAA
AATAGCAATGCAGCATGCTGGAGGGAGCTTGAATCGACCGGCGAGTAAGT
TGCTTGGGGCGGTGAATCGGTTGAGGAGCGAGTATGAGTTGTTTGGGGCG
GGGGTTTGTAGGGTTTTAGGGAATTTGGAGGGGAGGGGTGGGTTGGGAAG
GGAGTTTACGAGGTGCGAGGGGTTGAGGGATCCGGCTGTTCTTCGGGATG
GGGATGAATGGACATGGTGGTGGTGGTGGGGTGTTATAGGGAGGATGGTC
TGGGGGGCTGTTGTTGCTGTTTTGGTGGGTATTTTTGGGTTTGGGTTGGA
GGACGTGAGGTTCAAAGTTGGGAAGGGGAGGAATAAGGGGGGAGGAACGG
GTCCTGAAGATGAAGAGAAGAAGGGAGCTAAGAAGCAGGTGAATGTGCAC
TACGGTCTCGTTGCATCCGGGAACTGGGCTGTGAGGGATGCCAAGGCACG
AGATGCTCTCAATAAGAGGTTTGATGGGCAACTGCTCTGTATAGAGACGG
GTGGAGCTGCCGGAGTGATGAATGAGATACCGAGCATTGTCATCCGTGGG
ATTTCAGATTATGCGGATGCGAGTGCGAATGAGGATTGGCAGGCATACGC
TGCTACTGTGGCTGCGGTTTATGCGAAAGAACTGCTGGGGTTCTTGCACC
CGTGTGTTGACCATATGGACATGCATTATCCTCCTAAGGCTGGGACTGAA
GGTGGTAAGTGGGTACCTTCCTCATATTTAAGTTGGAGAATCTTAGCTAA
CCTCCCGATTGCGAAGATGTTTCCCTAGGAAGAGAAAATATAGGACAAAC
AGGATCCGCTTTCTCCAGACACCACAAACGCCTGGTATCTAATCCAGGTA
CACCTCCTGAGTACAGTCTACAGTGAACCTGCTAGTATGTCGAGAGGAAA
GAAGTGTATCCAAACATTAGCGTGTGTGAAATGATTCGGTAGGAGGACCT
GTACGAAAGGAGCCAAATCATCGCTATGTTCTCC back to topCoding sequence (CDS) from alignment at ch5:1885690..1887173+ >KJC3_007233-T1 ID=KJC3_007233-T1|Name=KJC3_007233-T1|organism=Aspergillus niger KJC3|type=CDS|length=2460bp|location=Sequence derived from alignment at ch5:1885690..1887173+ (Aspergillus niger KJC3)
ATGCCCCAGTCCACAGAAACAAATCAGAACCTTCCACCCCTCCACACCTA
CACCATCGCCTACATCACCGCCCTCCCCAAAGAACAAACCGCCGTCCTCG
CCACCCTCGACACCATCCACCACCAGCACATCCCTACTCCCGCAAGCGAC
AAAAACACCTACACCCTCGGCTCCATATCACCGCACAACATCGTCTTAAT
CTGCCTCCCCACCATGGGAACAACCGCCGCCGCAAGCGCAGTGACATCTC
TTCTTCACATGTTCCCGTCCATCAGGTTCGTTCTGCTCGTTGGCGTGGCG
GGCGGTATTCCGAGCAATGGAGTACGATTGGGTGATGTGGTTGTTAGTGT
GCCGGTTAGTGGTGGGTATGGGGGTGTGGTGGGGTGGGATATGGGGAAAT
TAGTAGCTGGGGGTAAAATAGCAATGCAGCATGCTGGAGGGAGCTTGAAT
CGACCGGCGAGTAAGTTGCTTGGGGCGGTGAATCGGTTGAGGAGCGAGTA
TGAGTTGTTTGGGGCGGGGGTTTGTAGGGTTTTAGGGAATTTGGAGGGGA
GGGGTGGGTTGGGAAGGGAGTTTACGAGGTGCGAGGGGTTGAGGGATCCG
GCTGTTCTTCGGGATGGGGATGAATGGACATGGTGGTGGTGGTGGGGTGT
TATAGGGAGGATGGTCTGGGGGGCTGTTGTTGCTGTTTTGGTGGGTATTT
TTGGGTTTGGGTTGGAGGACGTGAGGTTCAAAGTTGGGAAGGGGAGGAAT
AAGGGGGGAGGAACGGGTCCTGAAGATGAAGAGAAGAAGGGAGCTAAGAA
GCAGGTGAATGTGCACTACGGTCTCGTTGCATCCGGGAACTGGGCTGTGA
GGGATGCCAAGGCACGAGATGCTCTCAATAAGAGGTTTGATGGGCAACTG
CTCTGTATAGAGACGGGTGGAGCTGCCGGAGTGATGAATGAGATACCGAG
CATTGTCATCCGTGGGATTTCAGATTATGCGGATGCGAGTGCGAATGAGG
ATTGGCAGGCATACGCTGCTACTGTGGCTGCGGTTTATGCGAAAGAACTG
CTGGGGTTCTTGCACCCGTGTGTTGACCATATGGACATGCATTATCCTCC
TAAGGCTGGGACTGAAGGTGATGTTTCCCTAGGAAGAGAAAATATAGGAC
AAACAGGATCCGCTTTCTCCAGACACCACAAACGCCTGGTATCTAATCCA
GGTACACCTCCTGAGTACAGTCTACAGTGAATGCCCCAGTCCACAGAAAC
AAATCAGAACCTTCCACCCCTCCACACCTACACCATCGCCTACATCACCG
CCCTCCCCAAAGAACAAACCGCCGTCCTCGCCACCCTCGACACCATCCAC
CACCAGCACATCCCTACTCCCGCAAGCGACAAAAACACCTACACCCTCGG
CTCCATATCACCGCACAACATCGTCTTAATCTGCCTCCCCACCATGGGAA
CAACCGCCGCCGCAAGCGCAGTGACATCTCTTCTTCACATGTTCCCGTCC
ATCAGGTTCGTTCTGCTCGTTGGCGTGGCGGGCGGTATTCCGAGCAATGG
AGTACGATTGGGTGATGTGGTTGTTAGTGTGCCGGTTAGTGGTGGGTATG
GGGGTGTGGTGGGGTGGGATATGGGGAAATTAGTAGCTGGGGGTAAAATA
GCAATGCAGCATGCTGGAGGGAGCTTGAATCGACCGGCGAGTAAGTTGCT
TGGGGCGGTGAATCGGTTGAGGAGCGAGTATGAGTTGTTTGGGGCGGGGG
TTTGTAGGGTTTTAGGGAATTTGGAGGGGAGGGGTGGGTTGGGAAGGGAG
TTTACGAGGTGCGAGGGGTTGAGGGATCCGGCTGTTCTTCGGGATGGGGA
TGAATGGACATGGTGGTGGTGGTGGGGTGTTATAGGGAGGATGGTCTGGG
GGGCTGTTGTTGCTGTTTTGGTGGGTATTTTTGGGTTTGGGTTGGAGGAC
GTGAGGTTCAAAGTTGGGAAGGGGAGGAATAAGGGGGGAGGAACGGGTCC
TGAAGATGAAGAGAAGAAGGGAGCTAAGAAGCAGGTGAATGTGCACTACG
GTCTCGTTGCATCCGGGAACTGGGCTGTGAGGGATGCCAAGGCACGAGAT
GCTCTCAATAAGAGGTTTGATGGGCAACTGCTCTGTATAGAGACGGGTGG
AGCTGCCGGAGTGATGAATGAGATACCGAGCATTGTCATCCGTGGGATTT
CAGATTATGCGGATGCGAGTGCGAATGAGGATTGGCAGGCATACGCTGCT
ACTGTGGCTGCGGTTTATGCGAAAGAACTGCTGGGGTTCTTGCACCCGTG
TGTTGACCATATGGACATGCATTATCCTCCTAAGGCTGGGACTGAAGGTG
ATGTTTCCCTAGGAAGAGAAAATATAGGACAAACAGGATCCGCTTTCTCC
AGACACCACAAACGCCTGGTATCTAATCCAGGTACACCTCCTGAGTACAG
TCTACAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007233-T1.utr5p1 | KJC3_007233-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007233-T1.utr3p1 | KJC3_007233-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035994 |
| DBxref | InterPro:IPR000845 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1885690..1887173 + |
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