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KJC3_007235-T1, KJC3_007235-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007235-T1
Unique NameKJC3_007235-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1887841..1889925-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007235-T1 ID=KJC3_007235-T1|Name=KJC3_007235-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2085bp|location=Sequence derived from alignment at ch5:1887841..1889925- (Aspergillus niger KJC3)
CCTCCTTCGTGGCGAATTGGGCGCTTGCCTGTGCATTTGATCGCCGTGTA
TGCCTGCCATCTACATCATATTTTGTAGGTGAGAAAAGTCAATTAAAATT
TCAAGTCTCGCCTAATGCTCTGCCAGGATTGCAGTGGGTTCTCCCAGATT
CATCGTTCTGCAGAACCATATGATGGAATAGACATCATCCGAGATCCACC
AGATTTTGACCCGCCGATCCTTCACTTCTTTTCTCGGTCCGCTTCCAGAA
TTTATATCACGTGAAGTATAATCATATATTACTAAGCGGTTGCTGAGATA
ATCAGCTCAACACGTGGTTTTCATAACGCACCACGTGACTTATACTCACC
CTAATCCATTTTGGGGAAAGCATCGATCAGCTCGAAACCGAATATAGATG
GAAGATGGCCCCCAACGAGCTGTGCCAACTTGGTTTAGTATGGCCCAGCT
GACCGGGCTGTGAATGAGACAGGAGTTCCCAGTCATACCTGTTCGCACCA
TTTGGCCCCATTGACTGCTGTTTTACATTGGCTGCATGAGCTCCTGTTCA
TGCTCTTGTAACCTATCGTAAGCCAGGCCTTGGGATCTATCTGATCCTTA
ATATATCCCAGGATCTGAGCCGGACTTGGCTGGTTTGCTGTTGGCTAATG
CAAGGCTGTCTGTGGTAGTCGCAGGGAGTTGCTCATCATGCAGTGTGCCT
ACATAAAACCGCCCTTTACCCTGGGTGATTTGCATCTTACTCGTGCGTCC
CTATTTTTGCTATCATAATCCTGTGCTGCGCACAGTGTCACTCCTTCACA
TCGCAATCGCTCTTTCACTTTGGCGAGACATATCACTCTTTTCTGTTTTG
TCAATTACATTCCTTCTTTGCTTTCGACCAGCGAGAACTCGCGTTATATA
CGAACAGAAGCTCAATTCGTCTTGGTAGCAATATGGTCTCTTTTTCGAAG
CTCTTCACTGCTGCCCTGGTGGCTGCCTCTGCCGCAGCCTCTTCCAGCAA
GCGCGGTGCAGCCTACAACGATGCCTCCCTTGTCCGTACCCTAGCGAACA
GCAAGTCCGGAAGTATGTCGTGGTCATACAACTGGGACATGAAGAAGAAC
GGGAACATGCCCTCCGGTGTTGAATTTGTGCCGATGCTCTGGGGTACTGA
CTCGGTGGATGACTGGGACTCTGCAGTAAAGACTGCATTGAAGGGTGGCA
GCAAACATATCTTGGGTTTCAACGAACCGGACAACGCCTCGCAGGCCAAC
ATTGGTGCCTCCAAGGCGGCCACCTTGTACAAGAAGTATATCACCCCATA
CGGAGATAGCGCCAAGCTTGTCAGTCCGGCCATCACTTCCTCCACTCAGT
CCGGCGAGGGCATCAGCTGGTTCAAGTCCTTCATGAACGATTGCAAGAGC
TGCAACATCTCCGCTATGGCTGTTCACTGGTACGGTGGATCATTTGCTCA
GCTCGAGTCGTATATGAAGGAGGCTATCGAGGCTGCTTCGAAGTATGATA
TCGACGAGGTCTGGCTCACCGAGTTCGCCCTGGATTCCGACACCAACGGT
ATCACCAATGAGTCCACGGCTAAGACTTTCCTTGAGAAATCTATCGAGTG
GATGGACTCTCACCCTAAGGTGGGCCGTTACGCTTACTTCTATACCGCAA
ACAACTACTTGCTTACCAGTGGCTCGGTCAATGCTCTGGGCAAGGTCTAT
ATTTCGACCTCTTCGTCTTCTTCTAGCTCTGAGACCTCGTCGACCAAGAC
TTCGACCAAAACCTCGACCAAGACCTCAACCAAGACTTCCACCAAGACTT
CTACGAAGACTTCCACAAAGACCTCATCAAAGACAACCAAGACAACAGAG
ACCTCCAAGACCACCAGTACCAAATCCGCCCACACGACCAAGACTGCAGA
GTCAACCAAGACGGTCAAGACCACCAAGTTCGTCACGTCCACCAAGACTG
CAACGCACACCAAGACAGCTTCTATTACACCGCAGGCTTCCTGGAACTCG
GTGCCCACGAAGCCCGCATACGGATGGTAGATCTGCTGTTATCTGTCTTT
GACACCATATGTTCTGTAGAATTTGTGACGCCACG
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Coding sequence (CDS) from alignment at ch5:1887841..1889925-

>KJC3_007235-T1 ID=KJC3_007235-T1|Name=KJC3_007235-T1|organism=Aspergillus niger KJC3|type=CDS|length=1098bp|location=Sequence derived from alignment at ch5:1887841..1889925- (Aspergillus niger KJC3)
ATGGTCTCTTTTTCGAAGCTCTTCACTGCTGCCCTGGTGGCTGCCTCTGC
CGCAGCCTCTTCCAGCAAGCGCGGTGCAGCCTACAACGATGCCTCCCTTG
TCCGTACCCTAGCGAACAGCAAGTCCGGAAGTATGTCGTGGTCATACAAC
TGGGACATGAAGAAGAACGGGAACATGCCCTCCGGTGTTGAATTTGTGCC
GATGCTCTGGGGTACTGACTCGGTGGATGACTGGGACTCTGCAGTAAAGA
CTGCATTGAAGGGTGGCAGCAAACATATCTTGGGTTTCAACGAACCGGAC
AACGCCTCGCAGGCCAACATTGGTGCCTCCAAGGCGGCCACCTTGTACAA
GAAGTATATCACCCCATACGGAGATAGCGCCAAGCTTGTCAGTCCGGCCA
TCACTTCCTCCACTCAGTCCGGCGAGGGCATCAGCTGGTTCAAGTCCTTC
ATGAACGATTGCAAGAGCTGCAACATCTCCGCTATGGCTGTTCACTGGTA
CGGTGGATCATTTGCTCAGCTCGAGTCGTATATGAAGGAGGCTATCGAGG
CTGCTTCGAAGTATGATATCGACGAGGTCTGGCTCACCGAGTTCGCCCTG
GATTCCGACACCAACGGTATCACCAATGAGTCCACGGCTAAGACTTTCCT
TGAGAAATCTATCGAGTGGATGGACTCTCACCCTAAGGTGGGCCGTTACG
CTTACTTCTATACCGCAAACAACTACTTGCTTACCAGTGGCTCGGTCAAT
GCTCTGGGCAAGGTCTATATTTCGACCTCTTCGTCTTCTTCTAGCTCTGA
GACCTCGTCGACCAAGACTTCGACCAAAACCTCGACCAAGACCTCAACCA
AGACTTCCACCAAGACTTCTACGAAGACTTCCACAAAGACCTCATCAAAG
ACAACCAAGACAACAGAGACCTCCAAGACCACCAGTACCAAATCCGCCCA
CACGACCAAGACTGCAGAGTCAACCAAGACGGTCAAGACCACCAAGTTCG
TCACGTCCACCAAGACTGCAACGCACACCAAGACAGCTTCTATTACACCG
CAGGCTTCCTGGAACTCGGTGCCCACGAAGCCCGCATACGGATGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007235KJC3_007235Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007235-T1KJC3_007235-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007235-T1.cdsKJC3_007235-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007235-T1.utr3p1KJC3_007235-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007235-T1.exon3KJC3_007235-T1.exon3Aspergillus niger KJC3exon
KJC3_007235-T1.exon2KJC3_007235-T1.exon2Aspergillus niger KJC3exon
KJC3_007235-T1.exon1KJC3_007235-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007235-T1.utr5p3KJC3_007235-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_007235-T1.utr5p2KJC3_007235-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_007235-T1.utr5p1KJC3_007235-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH128
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR024655
DBxrefPFAM:PF11790
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1887841..1889925 -
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