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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1906232..1908095- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007244-T1 ID=KJC3_007244-T1|Name=KJC3_007244-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1864bp|location=Sequence derived from alignment at ch5:1906232..1908095- (Aspergillus niger KJC3)
TCTCACTTACAGTGACCTTTATTCATAGGTTCTTGATAGCAAATGAGCTC
TTACTCAAGACCTTGGTGTTTCACTGAAGATAGCTCTTTGACCGGGGCCG
CCATCGCCTCAGATACCTCCTAACCTGTCAAACGGCAAGAGACGCTCCTC
AGAAGGCGTTCCTTCCTTAAGCTTCATGATGTTCCAGCTTCCTTCCCTAC
GATGCTCTTTCCTGTGCAATCTTCTCAGTCTTCTATATCTTCTTCTCGTC
CCCATGAATTCCTCTCTTCTTCCTCTTCTCCTCCTCATACCACTTGTGGT
TCTGTGTTGTCGTTTCGCTGCCGCGCTACCCTCAACTCACGTTTATCAAT
CTGTTCCCTTGCTATACCTTGACTTGGTGTTTGTCCTCCCTCTCCCTCAC
AGCATGTCTCCTCCTTCATCTCTTCGTGGAGGACACCAGATGGCCCGTCT
GCGTGTTCCTCAGTCCTCCCCCTCCTCTTCCTCCTCTCTCCCCCCCAGCG
GTCAGAAGGATCCAGCACGTCCTTCTGTTCGTTCCGCTCCGTCTGTGCCC
ACCATGGTGAGCACGTCCTCTCGTTCTGGGGTGCCTGCCCCCACTGCCCC
CAAGTACTTGCGTACAAGCAAGTACTTGTCCACTCCCTCCTCTGTGGCTC
CTCGGACCACGTCCTCTCGTTCCTCCATTCCCACCCCTGTCTCTCGTTCC
TCCATCCCCTCCCCTGCCTCTCGCTCCCCTGTGGCTAAGGCCACGTCCAT
TCCCTCTCCCCCTTCCCTTTCCCCGGGTGCGTCGTTCCTGAAAAGGTTCG
ACGAGAAACACCCAACTTCCACTCGTTCTTCCCTCCCCGTCCCTGTCGCT
CGTTCCCCTGTGGCTCCTCGGACCACATCCTCTCGTTCCGCCCCCCAAAA
GACTACCAACGGCCCTAGCGCCACTCCCACTCGTTCTTCTCCTTCTGTGG
CTCCTCGGACCACGTCCTCTCGTTCTTCTATTCCCCTCGCTTCCTCTCGT
TCCCCTGTGGCTCAGGCCACGTCCATTCCCTCTTCCTCTTCCCTTTCCCC
GGGTGCGTCGTTCCTGAAAAGGTTCGACGAGAAACACCCAACTTACACTC
GTTCTTCCCTTCCTGTCCCTGCCCCTCGTTCTTCTGTGGCTCCCAAGGCC
ACGTCCACTCGTTCATCTATCCCCACCCCTGCCCCTCGCTCTCCTGTGGC
TCCTCGGACCACGTCCTCTCCTTCTGTGGCTCAGGCCACGTCCATTCCCT
CTCCCCCTTCCCTGTCCCCGGGTGCGTCGTTCCTGAAAAGGTTCGACGAA
AAGCACCCATCCACTCGTTTACCTGTGGCTCCTCGGACCACGTCCATTCC
TTCTCCTGTGGCTCCTCGGACCACGTCCACTCCTTCTGGTAATAGCCGTC
CGTCTCGCCTTCAGGCGTTGCGGGAGGCGTATTACCGATCCCGCGAGGCC
AGGGCTCGATCCGATGCAGCCCTTGCGTCCACCAAGGACGGAGCAGCTCC
GGCTGCGAAGTCTGCGGCTCGCAAGGGTAAGTCGGTGAAGAGTGTCCAGT
TTAGCGAGGTCACCACAGTCGTTACCGTAAGTCGGTGGATCATCAAAGCG
CGAGATATCCACCGCTGCTGTTGGTAGTCTTTTCCCCTTTTCTTTTCTCC
TTGTTGCAGGCTTTTCCTTGATTACTTTCGTTTTCCTGTATATTTTATTT
TTGTATGTTTATCCATTGCCCCCGACTTGGCTGTGCTGGAGCCAAGTCGG
GGCCCTTTACTGCTAATGGCCAGGTCACAGGTCCGGGCGAGAGACGACAT
TGAACGCCACCCACGAATGATCGAGCCGGCGACAGATTCACCGTCATCGA
TTCGCACCGGCTAA back to topCoding sequence (CDS) from alignment at ch5:1906232..1908095- >KJC3_007244-T1 ID=KJC3_007244-T1|Name=KJC3_007244-T1|organism=Aspergillus niger KJC3|type=CDS|length=2970bp|location=Sequence derived from alignment at ch5:1906232..1908095- (Aspergillus niger KJC3)
GTCCGGGCGAGAGACGACATTGAACGCCACCCACGAATGATCGAGCCGGC
GACAGATTCACCGTCATCGATTCGCACCGGCTAAATGATGTTCCAGCTTC
CTTCCCTACGATGCTCTTTCCTGTGCAATCTTCTCAGTCTTCTATATCTT
CTTCTCGTCCCCATGAATTCCTCTCTTCTTCCTCTTCTCCTCCTCATACC
ACTTGTGGTTCTGTGTTGTCGTTTCGCTGCCGCGCTACCCTCAACTCACG
TTTATCAATCTGTTCCCTTGCTATACCTTGACTTGGTGTTTGTCCTCCCT
CTCCCTCACAGCATGTCTCCTCCTTCATCTCTTCGTGGAGGACACCAGAT
GGCCCGTCTGCGTGTTCCTCAGTCCTCCCCCTCCTCTTCCTCCTCTCTCC
CCCCCAGCGGTCAGAAGGATCCAGCACGTCCTTCTGTTCGTTCCGCTCCG
TCTGTGCCCACCATGGTGAGCACGTCCTCTCGTTCTGGGGTGCCTGCCCC
CACTGCCCCCAAGTACTTGCGTACAAGCAAGTACTTGTCCACTCCCTCCT
CTGTGGCTCCTCGGACCACGTCCTCTCGTTCCTCCATTCCCACCCCTGTC
TCTCGTTCCTCCATCCCCTCCCCTGCCTCTCGCTCCCCTGTGGCTAAGGC
CACGTCCATTCCCTCTCCCCCTTCCCTTTCCCCGGGTGCGTCGTTCCTGA
AAAGGTTCGACGAGAAACACCCAACTTCCACTCGTTCTTCCCTCCCCGTC
CCTGTCGCTCGTTCCCCTGTGGCTCCTCGGACCACATCCTCTCGTTCCGC
CCCCCAAAAGACTACCAACGGCCCTAGCGCCACTCCCACTCGTTCTTCTC
CTTCTGTGGCTCCTCGGACCACGTCCTCTCGTTCTTCTATTCCCCTCGCT
TCCTCTCGTTCCCCTGTGGCTCAGGCCACGTCCATTCCCTCTTCCTCTTC
CCTTTCCCCGGGTGCGTCGTTCCTGAAAAGGTTCGACGAGAAACACCCAA
CTTACACTCGTTCTTCCCTTCCTGTCCCTGCCCCTCGTTCTTCTGTGGCT
CCCAAGGCCACGTCCACTCGTTCATCTATCCCCACCCCTGCCCCTCGCTC
TCCTGTGGCTCCTCGGACCACGTCCTCTCCTTCTGTGGCTCAGGCCACGT
CCATTCCCTCTCCCCCTTCCCTGTCCCCGGGTGCGTCGTTCCTGAAAAGG
TTCGACGAAAAGCACCCATCCACTCGTTTACCTGTGGCTCCTCGGACCAC
GTCCATTCCTTCTCCTGTGGCTCCTCGGACCACGTCCACTCCTTCTGGTA
ATAGCCGTCCGTCTCGCCTTCAGGCGTTGCGGGAGGCGTATTACCGATCC
CGCGAGGCCAGGGCTCGATCCGATGCAGCCCTTGCGTCCACCAAGGACGG
AGCAGCTCCGGCTGCGAAGTCTGCGGCTCGCAAGGGTAAGTCGGTGAAGA
GTGTCCAGTTTAGCGAGGTCACCACAGTCGTTACCGTCCGGGCGAGAGAC
GACATTGAACGCCACCCACGAATGATCGAGCCGGCGACAGATTCACCGTC
ATCGATTCGCACCGGCTAAATGATGTTCCAGCTTCCTTCCCTACGATGCT
CTTTCCTGTGCAATCTTCTCAGTCTTCTATATCTTCTTCTCGTCCCCATG
AATTCCTCTCTTCTTCCTCTTCTCCTCCTCATACCACTTGTGGTTCTGTG
TTGTCGTTTCGCTGCCGCGCTACCCTCAACTCACGTTTATCAATCTGTTC
CCTTGCTATACCTTGACTTGGTGTTTGTCCTCCCTCTCCCTCACAGCATG
TCTCCTCCTTCATCTCTTCGTGGAGGACACCAGATGGCCCGTCTGCGTGT
TCCTCAGTCCTCCCCCTCCTCTTCCTCCTCTCTCCCCCCCAGCGGTCAGA
AGGATCCAGCACGTCCTTCTGTTCGTTCCGCTCCGTCTGTGCCCACCATG
GTGAGCACGTCCTCTCGTTCTGGGGTGCCTGCCCCCACTGCCCCCAAGTA
CTTGCGTACAAGCAAGTACTTGTCCACTCCCTCCTCTGTGGCTCCTCGGA
CCACGTCCTCTCGTTCCTCCATTCCCACCCCTGTCTCTCGTTCCTCCATC
CCCTCCCCTGCCTCTCGCTCCCCTGTGGCTAAGGCCACGTCCATTCCCTC
TCCCCCTTCCCTTTCCCCGGGTGCGTCGTTCCTGAAAAGGTTCGACGAGA
AACACCCAACTTCCACTCGTTCTTCCCTCCCCGTCCCTGTCGCTCGTTCC
CCTGTGGCTCCTCGGACCACATCCTCTCGTTCCGCCCCCCAAAAGACTAC
CAACGGCCCTAGCGCCACTCCCACTCGTTCTTCTCCTTCTGTGGCTCCTC
GGACCACGTCCTCTCGTTCTTCTATTCCCCTCGCTTCCTCTCGTTCCCCT
GTGGCTCAGGCCACGTCCATTCCCTCTTCCTCTTCCCTTTCCCCGGGTGC
GTCGTTCCTGAAAAGGTTCGACGAGAAACACCCAACTTACACTCGTTCTT
CCCTTCCTGTCCCTGCCCCTCGTTCTTCTGTGGCTCCCAAGGCCACGTCC
ACTCGTTCATCTATCCCCACCCCTGCCCCTCGCTCTCCTGTGGCTCCTCG
GACCACGTCCTCTCCTTCTGTGGCTCAGGCCACGTCCATTCCCTCTCCCC
CTTCCCTGTCCCCGGGTGCGTCGTTCCTGAAAAGGTTCGACGAAAAGCAC
CCATCCACTCGTTTACCTGTGGCTCCTCGGACCACGTCCATTCCTTCTCC
TGTGGCTCCTCGGACCACGTCCACTCCTTCTGGTAATAGCCGTCCGTCTC
GCCTTCAGGCGTTGCGGGAGGCGTATTACCGATCCCGCGAGGCCAGGGCT
CGATCCGATGCAGCCCTTGCGTCCACCAAGGACGGAGCAGCTCCGGCTGC
GAAGTCTGCGGCTCGCAAGGGTAAGTCGGTGAAGAGTGTCCAGTTTAGCG
AGGTCACCACAGTCGTTACC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007244-T1.utr5p1 | KJC3_007244-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1906232..1908095 - |
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