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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1931034..1934166+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007252-T1 ID=KJC3_007252-T1|Name=KJC3_007252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3133bp|location=Sequence derived from alignment at ch5:1931034..1934166+ (Aspergillus niger KJC3)
GCCCTTGACTGTCGTGCTGAGATATAACATAACGATTTTTGAGTTGGCGT
TCATGATTTGTCCATAGTCAATGAAATACATGTGTTACTAGATAAATCGT
ATGTGAGTTGAAATAATAATCCTACACTCGAGAGATATCCTCAAAACAAA
AGAGAAAGCCCCAGATGGATCAACCCCGGATCAGATAAGACAGGTCAGGT
GGACAACTTGGCGTGGGTGGCGCCCACATGGCTTGAGGCTGCGGTGAACA
TCCCTTGCGGCGCCAAGACTTCTAAAATCGGATTGGCAGGTTGAGATCGC
AGGCTGCCAATCACATCCGGACTCCGACGGATTATAATTTATCTGCCGTC
GCACAGCGTCATAAGATTGGACAAGCCAAACACTCTGGATTGAGCTGCCA
TGTAATTGATCCGGAAGCCAAAGCTACATTTACTGTAATAATGGTAACGT
CTGAAGCGAGATTTGACGTGAAATTTTGAATGTCAATGGCGGTTATGAAG
TGGCTACTGTGGAGGAGACAGACAGATCGTGCAACTACGTCGTTGAGAAC
CCACCAGTGCAAAAATTTCACAGTTTTCCGCAGGAAAACCCTTCGCGGAA
GGGTTGAAAGCGGAATACGCTTGAGTTTCCCGCCAGCCCATAATTGGTCC
ATGTTGGACCCAGATGGTATGATTCCCGTCCCCCACCCAATCAGCGGGCC
TCAATGGCGACTGATGCAACGGCGGGGAGTAATCAGGTTTCAGACAGCAT
TACTCCGCGGTAAAGGACGGTGAAAACTCGATGTCAATGTCTGGGAGGTG
CGAATTACAGTCACCACAAAAATTCAAGCTTTGATTCGATTATTCATGTG
TTGCTGCTTCCCCTGTCTTGCGTCCAGGACAAGCTCGGAACGGCTCAGCT
CACCATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCAATGGGAGTAATA
AGTTCAACAAGGAGCCACTCCCCGCAAAGCTGAACGCCTGGGTCGATGGC
AAGCTGCCTGACGCTGTGGACGATGGAGAACAGCAGATCATCGAGGCTGG
AGAAGCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAACGGTCATGCTCA
TTGTGGAGGCCATTGGCCTAGGATCATTATCTATTCCTTCCGCGTTCGCA
TCGCTCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGGCATCGGCTTGAT
AGCCATTTACACCTCGTACGTGATTGGACAGGTGAAGCTCGCCTTCCCGG
CTGTTCGGGATTATGGTGATGCGGGTGCCTTGCTGATGGGTACCTGGGGT
CGGGAACTATTCACCTTCATGTTGATCCTCCAGCTGATCTTCCTGACGGG
TTCCAACTGCTTAACCGGCACCATTGCCCTTCGCCATATCACCTCTAGCG
GCATCTGCTCCGTTGTCTGGAGCGTGGTATCCGCGGTGATTCTTCTCTTG
CTCTCTATCCCTTCTTCTTTTGCCGATATGGCCTGGCTTGGCTATGTGGA
CTTCATTTCCATCGTGGCAGCCATTGGAATCACTATCATCGCTACTGGCA
TCCGGGGTACGGATTCCACCGGGGGCTTGGCAGCCGTGGACTGGTCAGCT
ACACCGCAGGGCGATCCTACCTTCTCAGATGGTTTCATCGCGATTAGCAA
TATTGTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTTCTTTCATGGATG
AGATGCATACCCCTAAGGAATTTACCAAATCCATCTGGTCTCTTGGCATC
CTCCAGATCGTCATTTACACTGTCACGGGCGCCACTATCTACGCCTTCGT
GGGTGTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTGGAACGCTTGTTA
GCAAGGTCGCCTTTGGCATTGCCCTTCCAGTCATTTTCATTTCCGGCGCT
ATCTGCACCATCGTGGCTGGACGCTTGATTCACGGCCGGATCTACGCCAA
CAGTGTGACCAAGTACATCAACACGCCCAAGGGCTGGATCACGTGGCTTA
CTGTTATCACTATCTTGACCATCATCTCGTGGGTCATTGCTGAGGCTATT
CCGTTCTTCGATGACCTTCTCTCCATCACATCGGCATTGTTCACCTCTGG
TTTCTCCTTCTACCTTCCCCCAATCATGTGGTATGTCCTCATCCGCAAGG
GCCCATGGTACTCCAAGGAGAACCTGTTGACCAGTCTGGTGAATCTGTTT
GTCTTTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCTTTACTCGAGTAT
TCAGGATATAGTAAGTTATCTAACCCTCCTTTCAAATTGAGTTGTCACTA
ATCATGTCCAACAGCGACTTAATTACCGTGAAGGTGATGTCAACAGCCCC
TTCACTTGTGGTGAAGTTTCATAAATGCTTTGTTTATCGTTATATATTGC
CCGCACATGTTAATAGACCCTTGTACCGAGCCATCCGGCTTGATGATCCC
CATGCTTTTATCTGGAATGTCTAACTTGTCATATCTCACGAAGACATGAT
AAAATTGCCACACTGGCTTTGCATTGTTGGAAAAGAAAATGTTGTATATT
AGCTGCCTGTACATATATTGAGCTCTGTTGAATCGGGATGCAGAGGACAG
GACAGCCTTCACTCTGAGATTCTTTGTGTTGACTTTCGTCACTCGTTGTT
CCAATCCGCCACTTGTCGACGAAAAACATCACTCAGGCAGTGATTTTCAT
CTATTCTTGGTCCGCACTGTGGTCTACTATATTACCTTTCGAATGCTGGC
CACCATAACAATCAGGTCGCACTTTCAATTCGACCACAAATCGAAAACGA
TTGACGACCGCACATGCAACCTTCATATTCAAAGATGCCATTTTATCGAC
AACGGAATTGTTGATCTACCTGTGGGCATTTCATGACGACTCGCCTATCA
TCTTCTTGATCATATAAAACATCATCATCCTCTTCATCAACATCCAAAGG
GGACTTGACCCTCCACCTTTAACATCTTTTTGGGATAAACGGATTGCTAG
ATAGCTATACATACTGTACTACTAATATATAATACTGCGAATATCTCACC
AATTGATTTCAGAGGATAATGGAAGGCTCGGAGTTAATTACCATTCATGT
GAGAGAGCATGCTAGAGGAAAGTGGGAATGGCG back to topCoding sequence (CDS) from alignment at ch5:1931034..1934166+ >KJC3_007252-T1 ID=KJC3_007252-T1|Name=KJC3_007252-T1|organism=Aspergillus niger KJC3|type=CDS|length=2832bp|location=Sequence derived from alignment at ch5:1931034..1934166+ (Aspergillus niger KJC3)
ATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCAATGGGAGTAATAAGTT
CAACAAGGAGCCACTCCCCGCAAAGCTGAACGCCTGGGTCGATGGCAAGC
TGCCTGACGCTGTGGACGATGGAGAACAGCAGATCATCGAGGCTGGAGAA
GCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAACGGTCATGCTCATTGT
GGAGGCCATTGGCCTAGGATCATTATCTATTCCTTCCGCGTTCGCATCGC
TCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGGCATCGGCTTGATAGCC
ATTTACACCTCGTACGTGATTGGACAGGTGAAGCTCGCCTTCCCGGCTGT
TCGGGATTATGGTGATGCGGGTGCCTTGCTGATGGGTACCTGGGGTCGGG
AACTATTCACCTTCATGTTGATCCTCCAGCTGATCTTCCTGACGGGTTCC
AACTGCTTAACCGGCACCATTGCCCTTCGCCATATCACCTCTAGCGGCAT
CTGCTCCGTTGTCTGGAGCGTGGTATCCGCGGTGATTCTTCTCTTGCTCT
CTATCCCTTCTTCTTTTGCCGATATGGCCTGGCTTGGCTATGTGGACTTC
ATTTCCATCGTGGCAGCCATTGGAATCACTATCATCGCTACTGGCATCCG
GGGTACGGATTCCACCGGGGGCTTGGCAGCCGTGGACTGGTCAGCTACAC
CGCAGGGCGATCCTACCTTCTCAGATGGTTTCATCGCGATTAGCAATATT
GTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTTCTTTCATGGATGAGAT
GCATACCCCTAAGGAATTTACCAAATCCATCTGGTCTCTTGGCATCCTCC
AGATCGTCATTTACACTGTCACGGGCGCCACTATCTACGCCTTCGTGGGT
GTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTGGAACGCTTGTTAGCAA
GGTCGCCTTTGGCATTGCCCTTCCAGTCATTTTCATTTCCGGCGCTATCT
GCACCATCGTGGCTGGACGCTTGATTCACGGCCGGATCTACGCCAACAGT
GTGACCAAGTACATCAACACGCCCAAGGGCTGGATCACGTGGCTTACTGT
TATCACTATCTTGACCATCATCTCGTGGGTCATTGCTGAGGCTATTCCGT
TCTTCGATGACCTTCTCTCCATCACATCGGCATTGTTCACCTCTGGTTTC
TCCTTCTACCTTCCCCCAATCATGTGGTATGTCCTCATCCGCAAGGGCCC
ATGGTACTCCAAGGAGAACCTGTTGACCAGTCTGGTGAATCTGTTTGTCT
TTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCTTTACTCGAGTATTCAG
GATATACGACTTAATTACCGTGAAGGTGATGTCAACAGCCCCTTCACTTG
TGGTGAAGTTTCATAAATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCA
ATGGGAGTAATAAGTTCAACAAGGAGCCACTCCCCGCAAAGCTGAACGCC
TGGGTCGATGGCAAGCTGCCTGACGCTGTGGACGATGGAGAACAGCAGAT
CATCGAGGCTGGAGAAGCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAA
CGGTCATGCTCATTGTGGAGGCCATTGGCCTAGGATCATTATCTATTCCT
TCCGCGTTCGCATCGCTCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGG
CATCGGCTTGATAGCCATTTACACCTCGTACGTGATTGGACAGGTGAAGC
TCGCCTTCCCGGCTGTTCGGGATTATGGTGATGCGGGTGCCTTGCTGATG
GGTACCTGGGGTCGGGAACTATTCACCTTCATGTTGATCCTCCAGCTGAT
CTTCCTGACGGGTTCCAACTGCTTAACCGGCACCATTGCCCTTCGCCATA
TCACCTCTAGCGGCATCTGCTCCGTTGTCTGGAGCGTGGTATCCGCGGTG
ATTCTTCTCTTGCTCTCTATCCCTTCTTCTTTTGCCGATATGGCCTGGCT
TGGCTATGTGGACTTCATTTCCATCGTGGCAGCCATTGGAATCACTATCA
TCGCTACTGGCATCCGGGGTACGGATTCCACCGGGGGCTTGGCAGCCGTG
GACTGGTCAGCTACACCGCAGGGCGATCCTACCTTCTCAGATGGTTTCAT
CGCGATTAGCAATATTGTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTT
CTTTCATGGATGAGATGCATACCCCTAAGGAATTTACCAAATCCATCTGG
TCTCTTGGCATCCTCCAGATCGTCATTTACACTGTCACGGGCGCCACTAT
CTACGCCTTCGTGGGTGTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTG
GAACGCTTGTTAGCAAGGTCGCCTTTGGCATTGCCCTTCCAGTCATTTTC
ATTTCCGGCGCTATCTGCACCATCGTGGCTGGACGCTTGATTCACGGCCG
GATCTACGCCAACAGTGTGACCAAGTACATCAACACGCCCAAGGGCTGGA
TCACGTGGCTTACTGTTATCACTATCTTGACCATCATCTCGTGGGTCATT
GCTGAGGCTATTCCGTTCTTCGATGACCTTCTCTCCATCACATCGGCATT
GTTCACCTCTGGTTTCTCCTTCTACCTTCCCCCAATCATGTGGTATGTCC
TCATCCGCAAGGGCCCATGGTACTCCAAGGAGAACCTGTTGACCAGTCTG
GTGAATCTGTTTGTCTTTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCT
TTACTCGAGTATTCAGGATATACGACTTAATTACCGTGAAGGTGATGTCA
ACAGCCCCTTCACTTGTGGTGAAGTTTCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007252-T1.utr3p1 | KJC3_007252-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013057 |
| DBxref | PFAM:PF01490 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1931034..1934166 + |
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