|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1971646..1972780+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007266-T1 ID=KJC3_007266-T1|Name=KJC3_007266-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1135bp|location=Sequence derived from alignment at ch5:1971646..1972780+ (Aspergillus niger KJC3)
ATGCGTGTCGGAAAGTCCACTCTCTTTGGCGGTCTCGCCCTGACTCCTTT
GACTTTGGCTGTGCCAATGCTCCAGTCTCGAGCCACCTCCGGTTAGCTCT
CTTCGACCTTCTACTCCTGCGCTTCCCTAACATCTTTTAGATCCGGCCGA
ATGGACGGAACTTCATAGAGCCGCACAGCTGTCCTCTGCAGCTTACACCG
GTTGTACCGGTAGTGCCTTCGATGTCACTATCACCAAGCAAATCAATGAG
CTTGTAACTGATACCCAAGTACGTGCCGTGCCCCAGTCAGCTTACGTCTA
CTAACAAGCTACAAGGGCTTCATCGGTTACTCCACCGAGAAGAAGCGTAT
AACCGTCGCCATGCGGGGTTCCACTAGCGGTTAGTACATAAAAATTATTA
TCACATTGACGAAAGATCCAAAACTGAGAATAACAGCAACCGACATCGCC
AACGACGTCGACACCACCCTCGTCGAGCCCACCCTGTCTGGAGTCAACTT
CCCTTCCGGCGCCAAGATGATGCACGGCATCTATTCTCCCTGGTCTTCCG
TGCACGATGATGTGATCTCGGAAGTCAAGTCGCTGGTCGAGCAATACCCC
GACTACACCATCGAATCGACCGGACACTCCCTCGGTGGCTCTCTCACCTA
CATCTCCTACATCGCGCTTGCGCAGAACTTCCCCGGAAAGACAATCATCA
GCAATGCCCTTGCGGCCTACCCCATCGGTAACGAGGCTTTCGCCAACTTT
GGTGCCTCTCAGAACGGAACCCTGAACCGGGGTAATAATGCTGATGATGG
TGTCCCTGTGAGTTACTCTTGACCTTATCTGGTCTGACCTTGAATGCTTA
CCAGCGATGTTTTAGAACATGTACGTCATGTGGCCCTGGGACTTTGTTCA
CTATGGCACCGTAGGTTTTCCTACTCCTAATATGTCCGCTATAAATATTC
CCCTAACATTTGGTCTGCTATAGGAATACTACAGCTCCGGAACTCAGGCC
AGCACGGTCAAGTGCAGTGGTGAGCGCGATACCTCTTGCTCGGCGGGTAA
TGGCCAGGTTGGTGTCACTGCTGGTCACTTTTCCAACTTTGGTATCGCTA
TGGGTATGGCTGGATGCTCTTCGTCGCTTTTGTAA back to topCoding sequence (CDS) from alignment at ch5:1971646..1972780+ >KJC3_007266-T1 ID=KJC3_007266-T1|Name=KJC3_007266-T1|organism=Aspergillus niger KJC3|type=CDS|length=5166bp|location=Sequence derived from alignment at ch5:1971646..1972780+ (Aspergillus niger KJC3)
ATGCGTGTCGGAAAGTCCACTCTCTTTGGCGGTCTCGCCCTGACTCCTTT
GACTTTGGCTGTGCCAATGCTCCAGTCTCGAGCCACCTCCGATCCGGCCG
AATGGACGGAACTTCATAGAGCCGCACAGCTGTCCTCTGCAGCTTACACC
GGTTGTACCGGTAGTGCCTTCGATGTCACTATCACCAAGCAAATCAATGA
GCTTGTAACTGATACCCAAGGCTTCATCGGTTACTCCACCGAGAAGAAGC
GTATAACCGTCGCCATGCGGGGTTCCACTAGCGCAACCGACATCGCCAAC
GACGTCGACACCACCCTCGTCGAGCCCACCCTGTCTGGAGTCAACTTCCC
TTCCGGCGCCAAGATGATGCACGGCATCTATTCTCCCTGGTCTTCCGTGC
ACGATGATGTGATCTCGGAAGTCAAGTCGCTGGTCGAGCAATACCCCGAC
TACACCATCGAATCGACCGGACACTCCCTCGGTGGCTCTCTCACCTACAT
CTCCTACATCGCGCTTGCGCAGAACTTCCCCGGAAAGACAATCATCAGCA
ATGCCCTTGCGGCCTACCCCATCGGTAACGAGGCTTTCGCCAACTTTGGT
GCCTCTCAGAACGGAACCCTGAACCGGGGTAATAATGCTGATGATGGTGT
CCCTAACATGTACGTCATGTGGCCCTGGGACTTTGTTCACTATGGCACCG
AATACTACAGCTCCGGAACTCAGGCCAGCACGGTCAAGTGCAGTGGTGAG
CGCGATACCTCTTGCTCGGCGGGTAATGGCCAGGTTGGTGTCACTGCTGG
TCACTTTTCCAACTTTGGTATCGCTATGGGTATGGCTGGATGCTCTTCGT
CGCTTTTGTAAATGCGTGTCGGAAAGTCCACTCTCTTTGGCGGTCTCGCC
CTGACTCCTTTGACTTTGGCTGTGCCAATGCTCCAGTCTCGAGCCACCTC
CGATCCGGCCGAATGGACGGAACTTCATAGAGCCGCACAGCTGTCCTCTG
CAGCTTACACCGGTTGTACCGGTAGTGCCTTCGATGTCACTATCACCAAG
CAAATCAATGAGCTTGTAACTGATACCCAAGGCTTCATCGGTTACTCCAC
CGAGAAGAAGCGTATAACCGTCGCCATGCGGGGTTCCACTAGCGCAACCG
ACATCGCCAACGACGTCGACACCACCCTCGTCGAGCCCACCCTGTCTGGA
GTCAACTTCCCTTCCGGCGCCAAGATGATGCACGGCATCTATTCTCCCTG
GTCTTCCGTGCACGATGATGTGATCTCGGAAGTCAAGTCGCTGGTCGAGC
AATACCCCGACTACACCATCGAATCGACCGGACACTCCCTCGGTGGCTCT
CTCACCTACATCTCCTACATCGCGCTTGCGCAGAACTTCCCCGGAAAGAC
AATCATCAGCAATGCCCTTGCGGCCTACCCCATCGGTAACGAGGCTTTCG
CCAACTTTGGTGCCTCTCAGAACGGAACCCTGAACCGGGGTAATAATGCT
GATGATGGTGTCCCTAACATGTACGTCATGTGGCCCTGGGACTTTGTTCA
CTATGGCACCGAATACTACAGCTCCGGAACTCAGGCCAGCACGGTCAAGT
GCAGTGGTGAGCGCGATACCTCTTGCTCGGCGGGTAATGGCCAGGTTGGT
GTCACTGCTGGTCACTTTTCCAACTTTGGTATCGCTATGGGTATGGCTGG
ATGCTCTTCGTCGCTTTTGTAAATGCGTGTCGGAAAGTCCACTCTCTTTG
GCGGTCTCGCCCTGACTCCTTTGACTTTGGCTGTGCCAATGCTCCAGTCT
CGAGCCACCTCCGATCCGGCCGAATGGACGGAACTTCATAGAGCCGCACA
GCTGTCCTCTGCAGCTTACACCGGTTGTACCGGTAGTGCCTTCGATGTCA
CTATCACCAAGCAAATCAATGAGCTTGTAACTGATACCCAAGGCTTCATC
GGTTACTCCACCGAGAAGAAGCGTATAACCGTCGCCATGCGGGGTTCCAC
TAGCGCAACCGACATCGCCAACGACGTCGACACCACCCTCGTCGAGCCCA
CCCTGTCTGGAGTCAACTTCCCTTCCGGCGCCAAGATGATGCACGGCATC
TATTCTCCCTGGTCTTCCGTGCACGATGATGTGATCTCGGAAGTCAAGTC
GCTGGTCGAGCAATACCCCGACTACACCATCGAATCGACCGGACACTCCC
TCGGTGGCTCTCTCACCTACATCTCCTACATCGCGCTTGCGCAGAACTTC
CCCGGAAAGACAATCATCAGCAATGCCCTTGCGGCCTACCCCATCGGTAA
CGAGGCTTTCGCCAACTTTGGTGCCTCTCAGAACGGAACCCTGAACCGGG
GTAATAATGCTGATGATGGTGTCCCTAACATGTACGTCATGTGGCCCTGG
GACTTTGTTCACTATGGCACCGAATACTACAGCTCCGGAACTCAGGCCAG
CACGGTCAAGTGCAGTGGTGAGCGCGATACCTCTTGCTCGGCGGGTAATG
GCCAGGTTGGTGTCACTGCTGGTCACTTTTCCAACTTTGGTATCGCTATG
GGTATGGCTGGATGCTCTTCGTCGCTTTTGTAAATGCGTGTCGGAAAGTC
CACTCTCTTTGGCGGTCTCGCCCTGACTCCTTTGACTTTGGCTGTGCCAA
TGCTCCAGTCTCGAGCCACCTCCGATCCGGCCGAATGGACGGAACTTCAT
AGAGCCGCACAGCTGTCCTCTGCAGCTTACACCGGTTGTACCGGTAGTGC
CTTCGATGTCACTATCACCAAGCAAATCAATGAGCTTGTAACTGATACCC
AAGGCTTCATCGGTTACTCCACCGAGAAGAAGCGTATAACCGTCGCCATG
CGGGGTTCCACTAGCGCAACCGACATCGCCAACGACGTCGACACCACCCT
CGTCGAGCCCACCCTGTCTGGAGTCAACTTCCCTTCCGGCGCCAAGATGA
TGCACGGCATCTATTCTCCCTGGTCTTCCGTGCACGATGATGTGATCTCG
GAAGTCAAGTCGCTGGTCGAGCAATACCCCGACTACACCATCGAATCGAC
CGGACACTCCCTCGGTGGCTCTCTCACCTACATCTCCTACATCGCGCTTG
CGCAGAACTTCCCCGGAAAGACAATCATCAGCAATGCCCTTGCGGCCTAC
CCCATCGGTAACGAGGCTTTCGCCAACTTTGGTGCCTCTCAGAACGGAAC
CCTGAACCGGGGTAATAATGCTGATGATGGTGTCCCTAACATGTACGTCA
TGTGGCCCTGGGACTTTGTTCACTATGGCACCGAATACTACAGCTCCGGA
ACTCAGGCCAGCACGGTCAAGTGCAGTGGTGAGCGCGATACCTCTTGCTC
GGCGGGTAATGGCCAGGTTGGTGTCACTGCTGGTCACTTTTCCAACTTTG
GTATCGCTATGGGTATGGCTGGATGCTCTTCGTCGCTTTTGTAAATGCGT
GTCGGAAAGTCCACTCTCTTTGGCGGTCTCGCCCTGACTCCTTTGACTTT
GGCTGTGCCAATGCTCCAGTCTCGAGCCACCTCCGATCCGGCCGAATGGA
CGGAACTTCATAGAGCCGCACAGCTGTCCTCTGCAGCTTACACCGGTTGT
ACCGGTAGTGCCTTCGATGTCACTATCACCAAGCAAATCAATGAGCTTGT
AACTGATACCCAAGGCTTCATCGGTTACTCCACCGAGAAGAAGCGTATAA
CCGTCGCCATGCGGGGTTCCACTAGCGCAACCGACATCGCCAACGACGTC
GACACCACCCTCGTCGAGCCCACCCTGTCTGGAGTCAACTTCCCTTCCGG
CGCCAAGATGATGCACGGCATCTATTCTCCCTGGTCTTCCGTGCACGATG
ATGTGATCTCGGAAGTCAAGTCGCTGGTCGAGCAATACCCCGACTACACC
ATCGAATCGACCGGACACTCCCTCGGTGGCTCTCTCACCTACATCTCCTA
CATCGCGCTTGCGCAGAACTTCCCCGGAAAGACAATCATCAGCAATGCCC
TTGCGGCCTACCCCATCGGTAACGAGGCTTTCGCCAACTTTGGTGCCTCT
CAGAACGGAACCCTGAACCGGGGTAATAATGCTGATGATGGTGTCCCTAA
CATGTACGTCATGTGGCCCTGGGACTTTGTTCACTATGGCACCGAATACT
ACAGCTCCGGAACTCAGGCCAGCACGGTCAAGTGCAGTGGTGAGCGCGAT
ACCTCTTGCTCGGCGGGTAATGGCCAGGTTGGTGTCACTGCTGGTCACTT
TTCCAACTTTGGTATCGCTATGGGTATGGCTGGATGCTCTTCGTCGCTTT
TGTAAATGCGTGTCGGAAAGTCCACTCTCTTTGGCGGTCTCGCCCTGACT
CCTTTGACTTTGGCTGTGCCAATGCTCCAGTCTCGAGCCACCTCCGATCC
GGCCGAATGGACGGAACTTCATAGAGCCGCACAGCTGTCCTCTGCAGCTT
ACACCGGTTGTACCGGTAGTGCCTTCGATGTCACTATCACCAAGCAAATC
AATGAGCTTGTAACTGATACCCAAGGCTTCATCGGTTACTCCACCGAGAA
GAAGCGTATAACCGTCGCCATGCGGGGTTCCACTAGCGCAACCGACATCG
CCAACGACGTCGACACCACCCTCGTCGAGCCCACCCTGTCTGGAGTCAAC
TTCCCTTCCGGCGCCAAGATGATGCACGGCATCTATTCTCCCTGGTCTTC
CGTGCACGATGATGTGATCTCGGAAGTCAAGTCGCTGGTCGAGCAATACC
CCGACTACACCATCGAATCGACCGGACACTCCCTCGGTGGCTCTCTCACC
TACATCTCCTACATCGCGCTTGCGCAGAACTTCCCCGGAAAGACAATCAT
CAGCAATGCCCTTGCGGCCTACCCCATCGGTAACGAGGCTTTCGCCAACT
TTGGTGCCTCTCAGAACGGAACCCTGAACCGGGGTAATAATGCTGATGAT
GGTGTCCCTAACATGTACGTCATGTGGCCCTGGGACTTTGTTCACTATGG
CACCGAATACTACAGCTCCGGAACTCAGGCCAGCACGGTCAAGTGCAGTG
GTGAGCGCGATACCTCTTGCTCGGCGGGTAATGGCCAGGTTGGTGTCACT
GCTGGTCACTTTTCCAACTTTGGTATCGCTATGGGTATGGCTGGATGCTC
TTCGTCGCTTTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| DBxref | InterPro:IPR002921 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF01764 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1971646..1972780 + |
|
