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KJC3_007276-T1, KJC3_007276-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007276-T1
Unique NameKJC3_007276-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2003319..2006123-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007276-T1 ID=KJC3_007276-T1|Name=KJC3_007276-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2805bp|location=Sequence derived from alignment at ch5:2003319..2006123- (Aspergillus niger KJC3)
ACGTAAGTATCCAACTTGGCTACACCGACTGACCAGACAAGCTTATACTC
TTCTCCGACTATTATTGCTTCCCCCTCCCCATCCATGCCCGATGCTATGC
CTAAGTGCCTTCAATCTACTGCTGTTCACCCCTCCCCGGTCCTCTCCATC
TTGACCGGCATGACGGTCACCATCTACTACTACCACTACTACTACTGCTA
ATGTTACTGTTACTGTTACTGCTACTTCTGCTGCGAGACTAACTAGCTTC
CCTGTCGGCTGCATCTGCTCTGCACGCTAATCCCACCCCCTTCCCTGCTT
CTTCCTTTTTGGCATTTTCATGTGGATTTGACTTCTTCCATCGCGATCCG
TACCTCTTTCTTTCCCGTCCCGCTGGATTTCTATTATCTCAGGGCGCACA
CACCACAAACCCAGAAAATCAATCGGCAAACTCTAGAAACAGACCCGTTT
TTACGAATCTCTGACAATCCTTCCCTCGAATCACCTCACATTGCCCGTGC
TCCCCTCATCCCATCACTCATCACATCCAGCCAACGGCCCTCCTTGCGTC
TTGGCTGGTCTCCGGTCTCTTTTAGCGGCTGGGTCGCTGGATCCGTGATC
TAATTATATATCCGATCCAACTCTCGGCTCGACGCTTGGATAGTGCGCAT
GGTCTATCACTCCTTCACTGTGGTTATCGCTCTCTCGACTTGCAGCCACA
CCGACCTGCCGCGTGCCGACCCCAACCGGCTTACCCTCGATTGGATTCCC
TTTACGGCATCGTCCCAGTCGTCTCGGTGCCCCTCGTCACATCCCTGCTC
CAGCGTGGCCAGGACCCAGCCATTGCGTCTTGGCCATAGCCAGTCGCATA
CATATACACTCGCGGGTTGCTGCGGCGTCTCGCCTCGCCCAAGTCAACTA
GGCCAGTGGCCGTGCTACGGACAACTTGACCATGTCCTTGAAGCAGGTAC
GTATCCCCGCAACTAGGGTTTAGGGTGATGGCTAATGAGACTAGGAAATT
GAGACCTGGGTACAGGCCCTAGACCACTACGATAACCAGGAATATGATGA
AGCTCTTAGGGTCTTTGGTGCGATTGCAGAGACTTCCAAGATCCTCTTCA
ACTGCGGGGTCATCTATGCCACGTTAGGAGAGCATGAACGAGCTGTATGA
CACCCGGCCATCTGCCCGGACGTTACTGACGAGGAACAGGTTGATTGCTA
CCAGCGGGCTGTTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCCAAG
AGGGAGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAAT
TTCAATGACACGCTGCTCTACCTCCGGGGCAACACTTCCATCGACTACGA
GCAGTTGGGCTTGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCAATC
GGGGCCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGAC
CTGCAATACGCATCGAAAGAGAAGGTCACGCCCGACCACGATGTGATCGA
CGATGCCATTCGTGAACAAGCGGCGGTAGGTCAGCTTCCTCTTGTGAGGG
TGATGGTACTGACGGATTAGGGCTACACGGTCTTTTCGATTCCGGTTGGG
GTGGTGTACCGACCCAACGAGGCCAAGGTCAAGAACCTCAAGGCGAAAGA
CTACCTGGGCAAGTCCCGGTTGATTGCCGCGTCCGAGCGCAGCAGCATGC
CGTCCGCCGCCAGCGACGACCTCAAGCGGACCATGTCCATGCTGGACCAC
CGCAAGCCAGAGACGCTGCCGTTTGCCACGTCACACCTGGTGCATAAGAA
CCTGCAGAGTCGGAGCCGTCAGCAATCGGAGCCGCCTCTGAACCGTAATC
TCTTCCCTCCTACTCCCCCGCCGGACGCAGACAAGGCGAGTACCAACAGC
TCCACAGGTAGTCTCGCGATGAACAGTCGACCGGGCTCCATCCGGGCAGC
GCGGCCGCCCCGGCTCGACCTGGAACGGCCGGCCAACACCGCGGGCCACA
GTACCGAAACGCTGGTCGACAAGCCGCGGATCGGCACGACGCGCACGGCG
TCCGAGTCGCGGGCAGGTCCGGGTCGACCGGGGCCGGGGCCGCGAGGGCC
GGGCGAGTCCCACGGCCATCGACGAGGCATGAGTGACACGGGCTTTGCCC
CGACGGTGAGCCCGGAGGAGACGTACTCGGGTACCCGATCGATGCCAGCG
GGAGCCAGCTGGCGCCGTCAGCAAGAACGGTATATTGACGAGCAGGAAGA
GTATGCCAGTGATGCGTACGAGGACCACGGGCCGGACGGTGAGTTTGAGA
TCATGGGGACGCGGCCACAGGCGTCCCCGAACCGGGGATCGCGGCGGGGG
ACGTCACGGCGGCCAGAGGTGCGCAAGTTCCGGGTGAAGGCGCATTCACG
AGAAGATACACGGTACATCATGATGGAACCGACGATTGAGTTTAGAGAGT
TTGAGAGTCGGATTCGCGACAAGTTTGGATTCCGCACGCTGCTGCGAATC
CGCATGCAGGACGACGGGGACATGATTACGATGGTGGACCAGGAGGATCT
AGACTTGTTGATGGCAGGATCGCGCGAGATGGCACGACGAGAGGGAAGCG
AGATGGGGAAGATGGAGGTATGCCCACTCTCTGTTAAGAAGAAAAGTAAG
ACATCATGCTAACCAATGACAAGATATGGGTTGAGGAGCGAGGCGTGATT
TAGGATTGCATTAGCGTATACCCTGGAGTTTGGTCGGATATGGTATGGTT
GTATGGTTGTATGGATGATATGAGTTATGACAATGCATAAAACACGTAAG
CATAC
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Coding sequence (CDS) from alignment at ch5:2003319..2006123-

>KJC3_007276-T1 ID=KJC3_007276-T1|Name=KJC3_007276-T1|organism=Aspergillus niger KJC3|type=CDS|length=6372bp|location=Sequence derived from alignment at ch5:2003319..2006123- (Aspergillus niger KJC3)
GGCTACACGGTCTTTTCGATTCCGGTTGGGGTGGTGTACCGACCCAACGA
GGCCAAGGTCAAGAACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGGT
TGATTGCCGCGTCCGAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGAC
CTCAAGCGGACCATGTCCATGCTGGACCACCGCAAGCCAGAGACGCTGCC
GTTTGCCACGTCACACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGTC
AGCAATCGGAGCCGCCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCG
CCGGACGCAGACAAGGCGAGTACCAACAGCTCCACAGGTAGTCTCGCGAT
GAACAGTCGACCGGGCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGACC
TGGAACGGCCGGCCAACACCGCGGGCCACAGTACCGAAACGCTGGTCGAC
AAGCCGCGGATCGGCACGACGCGCACGGCGTCCGAGTCGCGGGCAGGTCC
GGGTCGACCGGGGCCGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCATC
GACGAGGCATGAGTGACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAG
ACGTACTCGGGTACCCGATCGATGCCAGCGGGAGCCAGCTGGCGCCGTCA
GCAAGAACGGTATATTGACGAGCAGGAAGAGTATGCCAGTGATGCGTACG
AGGACCACGGGCCGGACGGTGAGTTTGAGATCATGGGGACGCGGCCACAG
GCGTCCCCGAACCGGGGATCGCGGCGGGGGACGTCACGGCGGCCAGAGGT
GCGCAAGTTCCGGGTGAAGGCGCATTCACGAGAAGATACACGGTACATCA
TGATGGAACCGACGATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGAC
AAGTTTGGATTCCGCACGCTGCTGCGAATCCGCATGCAGGACGACGGGGA
CATGATTACGATGGTGGACCAGGAGGATCTAGACTTGTTGATGGCAGGAT
CGCGCGAGATGGCACGACGAGAGGGAAGCGAGATGGGGAAGATGGAGGTA
TGCCCACTCTCTGTTAAGAAGAAAAGTAAGACATCATGCTAAGTTGATTG
CTACCAGCGGGCTGTTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCC
AAGAGGGAGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCT
AATTTCAATGACACGCTGCTCTACCTCCGGGGCAACACTTCCATCGACTA
CGAGCAGTTGGGCTTGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCA
ATCGGGGCCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAA
GACCTGCAATACGCATCGAAAGAGAAGGTCACGCCCGACCACGATGTGAT
CGACGATGCCATTCGTGAACAAGCGGCGGAAATTGAGACCTGGGTACAGG
CCCTAGACCACTACGATAACCAGGAATATGATGAAGCTCTTAGGGTCTTT
GGTGCGATTGCAGAGACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTA
TGCCACGTTAGGAGAGCATGAACGAGCTATGTCCTTGAAGCAGGGCTACA
CGGTCTTTTCGATTCCGGTTGGGGTGGTGTACCGACCCAACGAGGCCAAG
GTCAAGAACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGGTTGATTGC
CGCGTCCGAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGC
GGACCATGTCCATGCTGGACCACCGCAAGCCAGAGACGCTGCCGTTTGCC
ACGTCACACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGTCAGCAATC
GGAGCCGCCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACG
CAGACAAGGCGAGTACCAACAGCTCCACAGGTAGTCTCGCGATGAACAGT
CGACCGGGCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGACCTGGAACG
GCCGGCCAACACCGCGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGC
GGATCGGCACGACGCGCACGGCGTCCGAGTCGCGGGCAGGTCCGGGTCGA
CCGGGGCCGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCATCGACGAGG
CATGAGTGACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACT
CGGGTACCCGATCGATGCCAGCGGGAGCCAGCTGGCGCCGTCAGCAAGAA
CGGTATATTGACGAGCAGGAAGAGTATGCCAGTGATGCGTACGAGGACCA
CGGGCCGGACGGTGAGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCC
CGAACCGGGGATCGCGGCGGGGGACGTCACGGCGGCCAGAGGTGCGCAAG
TTCCGGGTGAAGGCGCATTCACGAGAAGATACACGGTACATCATGATGGA
ACCGACGATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTG
GATTCCGCACGCTGCTGCGAATCCGCATGCAGGACGACGGGGACATGATT
ACGATGGTGGACCAGGAGGATCTAGACTTGTTGATGGCAGGATCGCGCGA
GATGGCACGACGAGAGGGAAGCGAGATGGGGAAGATGGAGGTATGCCCAC
TCTCTGTTAAGAAGAAAAGTAAGACATCATGCTAAGTTGATTGCTACCAG
CGGGCTGTTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCCAAGAGGG
AGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCA
ATGACACGCTGCTCTACCTCCGGGGCAACACTTCCATCGACTACGAGCAG
TTGGGCTTGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCAATCGGGG
CCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGC
AATACGCATCGAAAGAGAAGGTCACGCCCGACCACGATGTGATCGACGAT
GCCATTCGTGAACAAGCGGCGGAAATTGAGACCTGGGTACAGGCCCTAGA
CCACTACGATAACCAGGAATATGATGAAGCTCTTAGGGTCTTTGGTGCGA
TTGCAGAGACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTATGCCACG
TTAGGAGAGCATGAACGAGCTATGTCCTTGAAGCAGGGCTACACGGTCTT
TTCGATTCCGGTTGGGGTGGTGTACCGACCCAACGAGGCCAAGGTCAAGA
ACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGGTTGATTGCCGCGTCC
GAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGCGGACCAT
GTCCATGCTGGACCACCGCAAGCCAGAGACGCTGCCGTTTGCCACGTCAC
ACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGTCAGCAATCGGAGCCG
CCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACGCAGACAA
GGCGAGTACCAACAGCTCCACAGGTAGTCTCGCGATGAACAGTCGACCGG
GCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGACCTGGAACGGCCGGCC
AACACCGCGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGCGGATCGG
CACGACGCGCACGGCGTCCGAGTCGCGGGCAGGTCCGGGTCGACCGGGGC
CGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCATCGACGAGGCATGAGT
GACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACTCGGGTAC
CCGATCGATGCCAGCGGGAGCCAGCTGGCGCCGTCAGCAAGAACGGTATA
TTGACGAGCAGGAAGAGTATGCCAGTGATGCGTACGAGGACCACGGGCCG
GACGGTGAGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCCCGAACCG
GGGATCGCGGCGGGGGACGTCACGGCGGCCAGAGGTGCGCAAGTTCCGGG
TGAAGGCGCATTCACGAGAAGATACACGGTACATCATGATGGAACCGACG
ATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTGGATTCCG
CACGCTGCTGCGAATCCGCATGCAGGACGACGGGGACATGATTACGATGG
TGGACCAGGAGGATCTAGACTTGTTGATGGCAGGATCGCGCGAGATGGCA
CGACGAGAGGGAAGCGAGATGGGGAAGATGGAGGTATGCCCACTCTCTGT
TAAGAAGAAAAGTAAGACATCATGCTAAGTTGATTGCTACCAGCGGGCTG
TTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCCAAGAGGGAGTGTCC
AACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCAATGACAC
GCTGCTCTACCTCCGGGGCAACACTTCCATCGACTACGAGCAGTTGGGCT
TGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCAATCGGGGCCTGTGC
TATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGCAATACGC
ATCGAAAGAGAAGGTCACGCCCGACCACGATGTGATCGACGATGCCATTC
GTGAACAAGCGGCGGAAATTGAGACCTGGGTACAGGCCCTAGACCACTAC
GATAACCAGGAATATGATGAAGCTCTTAGGGTCTTTGGTGCGATTGCAGA
GACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTATGCCACGTTAGGAG
AGCATGAACGAGCTATGTCCTTGAAGCAGGGCTACACGGTCTTTTCGATT
CCGGTTGGGGTGGTGTACCGACCCAACGAGGCCAAGGTCAAGAACCTCAA
GGCGAAAGACTACCTGGGCAAGTCCCGGTTGATTGCCGCGTCCGAGCGCA
GCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGCGGACCATGTCCATG
CTGGACCACCGCAAGCCAGAGACGCTGCCGTTTGCCACGTCACACCTGGT
GCATAAGAACCTGCAGAGTCGGAGCCGTCAGCAATCGGAGCCGCCTCTGA
ACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACGCAGACAAGGCGAGT
ACCAACAGCTCCACAGGTAGTCTCGCGATGAACAGTCGACCGGGCTCCAT
CCGGGCAGCGCGGCCGCCCCGGCTCGACCTGGAACGGCCGGCCAACACCG
CGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGCGGATCGGCACGACG
CGCACGGCGTCCGAGTCGCGGGCAGGTCCGGGTCGACCGGGGCCGGGGCC
GCGAGGGCCGGGCGAGTCCCACGGCCATCGACGAGGCATGAGTGACACGG
GCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACTCGGGTACCCGATCG
ATGCCAGCGGGAGCCAGCTGGCGCCGTCAGCAAGAACGGTATATTGACGA
GCAGGAAGAGTATGCCAGTGATGCGTACGAGGACCACGGGCCGGACGGTG
AGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCCCGAACCGGGGATCG
CGGCGGGGGACGTCACGGCGGCCAGAGGTGCGCAAGTTCCGGGTGAAGGC
GCATTCACGAGAAGATACACGGTACATCATGATGGAACCGACGATTGAGT
TTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTGGATTCCGCACGCTG
CTGCGAATCCGCATGCAGGACGACGGGGACATGATTACGATGGTGGACCA
GGAGGATCTAGACTTGTTGATGGCAGGATCGCGCGAGATGGCACGACGAG
AGGGAAGCGAGATGGGGAAGATGGAGGTATGCCCACTCTCTGTTAAGAAG
AAAAGTAAGACATCATGCTAAGTTGATTGCTACCAGCGGGCTGTTGGCCT
GGATCAGTACCTGGCTATTGCCTACTTCCAAGAGGGAGTGTCCAACTTCC
TTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCAATGACACGCTGCTC
TACCTCCGGGGCAACACTTCCATCGACTACGAGCAGTTGGGCTTGAAGTT
CCGGCTGTTCTCCTGTGAGGTGTTGTTCAATCGGGGCCTGTGCTATATTT
ACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGCAATACGCATCGAAA
GAGAAGGTCACGCCCGACCACGATGTGATCGACGATGCCATTCGTGAACA
AGCGGCGGAAATTGAGACCTGGGTACAGGCCCTAGACCACTACGATAACC
AGGAATATGATGAAGCTCTTAGGGTCTTTGGTGCGATTGCAGAGACTTCC
AAGATCCTCTTCAACTGCGGGGTCATCTATGCCACGTTAGGAGAGCATGA
ACGAGCTATGTCCTTGAAGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007276KJC3_007276Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007276-T1KJC3_007276-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007276-T1.cdsKJC3_007276-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007276-T1.utr3p1KJC3_007276-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007276-T1.exon4KJC3_007276-T1.exon4Aspergillus niger KJC3exon
KJC3_007276-T1.exon3KJC3_007276-T1.exon3Aspergillus niger KJC3exon
KJC3_007276-T1.exon2KJC3_007276-T1.exon2Aspergillus niger KJC3exon
KJC3_007276-T1.exon1KJC3_007276-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007276-T1.utr5p1KJC3_007276-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR034892
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR000270
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13181
DBxrefPFAM:PF00564
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2003319..2006123 -
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