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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2093157..2096554+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007306-T2 ID=KJC3_007306-T2|Name=KJC3_007306-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3398bp|location=Sequence derived from alignment at ch5:2093157..2096554+ (Aspergillus niger KJC3)
GAGCAGAGCAGAGCAGACAGAGAGAGAGGGAGAGGAGGTATCTGGTGCTG
GTGGTGTGCTCTCTACTTTACACTACTTTACTCGAACAAGCTCTAGCTTT
CAACTTCCACTCTCAGACTAGACCCTGTTGTCAATACCCTGCGACACCGG
CCTCCTTTTCAGCTGTTTCCCTTCCCATTACTTCTTTTCTTTTTCGCCGT
CGCTATTACTCGCCATCGACTCTTCTGTTCCCTCTGTGTTGTCCGTCCTC
TTTTTTCCGCAACATCGGAGCTCCGCCATAGCTGTACTTCCGACCATGTC
ACCTTAAAATATAATATCGACGTTCTTTCACAATGACTACGGATTCGCTC
GCGTCAGTCTCCTGCTTCCCTTCCCACTCAGGTGATCCAACTGGCCGATT
GCTAATGTCGTAACGATCTGCAGGCATCATCCGACGGAGTCTCTTATCCT
TCCCAACAAGCGCCGCTTCTTCCCCTTCAAAATTCCCAACTTGTCTGTAC
ATTGAGCTCGCAGAAAAGCAGACTGATCAGTGCTAATCATGAGACAGTCA
TCAACAACTTCGCAACTATATTAGCACCGCGGACCCGGACAGGATCTACG
TTGTCGTCGAGCGAGTCATCTACTCGATTCACATTTCATCACAAAAGCGG
GAGACCATTGCCGTTATTCCGTTTGAGCCAAAATGTCTTGCTGCTGGTTA
CGGCTGGATTGGGGTGGGGGGCGCCGATAATGGAGAATGCGCATTTGTTG
GGCTATCGTCCGATCGGAGTCCGCGCGCCCGTGCCGATACACCGGCTTTC
CAGCCGTCGGACGTGGACAGTGCTTTGCCAATCGATCTTGACCCTCCTGC
GAGGATATCGCCGCCTTGGATGCCTGGCGACGAACCTGGACCGGCTCGCC
ATGGCAATAGAAGGCAGGTTCCAGAGGTGCAATTGCACAAGTTCGGAGGC
AGTATCGTCAACTCAGTGACGATCCACCGTCTGCCTGGGGATGGAAAGGA
GTTAGCGGAGGAAGATATAGCCATTCTGAGGTATGGGCATGGCAATTTTC
CGAATCACCTGAGATGCTGATTGCTTTTGCAGTAACAACGATAAGACTGT
TACCGTTTACTCCCTGGCCCGGTCGAAAGTCCTCAAGGTGCTTCATCATC
CGGCGTGCATGAACTATGCGATCATGTCACCAGATTCAACTATCCTTGCT
GCGGTTGGTGATGAGACTCGTGCATATTTCTATGATGTTACCCGCGACCT
TGATGCTGTGACTGTAACGGATGAGGGTGACAAAGTTTGTGGGTGGAACT
GGGACCTTCTTCGTTGTATAGAAATGGACATAGGCACACGCTTTGACGAT
GGATGCTGTTTCACTGTCGCTTTTTCTCAATTCAGTCGATTATGCGCGAT
CGGTTCGCAGTCTGGAGTCATCACCATCTTTGATGTGGGGACCATCCGCG
ATATTATACGCCAGCCCCAGGGCCAGAATGCGATCATCTGTCGCTTCAAC
TCATCCAGAGCTTGTTGCAATGGAGGCGCTGTACGATGTATGGCGTTTGC
ACCTGAGCCCTGGGATCTTCTGGTATGGCTCGAAGACAAGGGGCGAGCTG
GGATTGCCGATGTTCGTCGCGGTTTCGTTCGCAGGCAGATACTGGAATTG
GATATGAACGAGCCCGAGTTGCAGGAAGTCCGTACGGAGCCATTGCTAGA
TGACTTATTATTCGAACTCGATGGTCGAGCCTCCCCAGACACACGGCATG
AACTCGACGCAACACAGCGAGCGATTGACTCGTTAGAGGGAGCACTCCAT
AACCAAGGCGCGACGGGTTCCGGCAACTCGCCACTAAGTGAGAGCCTGGT
ACAGGACCTCACAGAAAGAGAGAGGCTGATTGTTGAATTTTTGAATACAG
CGCGATGGACGTCGAGGATGGAAGACGGGTTAGCGGAGCGGCGAGCTAGA
GCTAATGCTCATCCTCACCCTCCAGTGCGCCCCCGGTTCCACGGTCCCAC
AGATGAGGCCACTCGAGCCTCCGGTCCTACTTCGCCTCCACCACGCAGTC
ATCCAAGCCGAGAGTTGTACCAGGAAGACTCGCAATCGGGAACTGGTGAT
CGTAGTCAGCATGCGAGACGCCGGGGCTCTGTCCTACTGACCCCTAGCCA
GAATGAAGCCAGCAGTAGAACACCCGAAATAGGACTGGCAAACCCCGATC
CGCAGCCTAGTATTACACTCAGCTGGACCGCTTCGCCCTCAGAGATCTAC
CCTAATCGATCAGACACCCCTGCGCATGCTACAGATTCAAGCTCCAGTGA
GCTTAACAGTTCTGGTAACGAGCATGGCTCCGCGGCTCGGCTTCATGGCA
CAATGAACCGTCCGTCCGCCAATTTTGATTATTCTAATACCACAGCAGAC
TTGTTGCCCCCGCCAAGAAACCACCAACGATCCCGTTCAGGCCACAGACG
GCTAGAGAGTCAGGATGGCACGCCCGAGGTCCTGCAAGACACACCGCGGC
TCTCGGGCACCGAATTGAGAGCCAGCGTGGCTGTGGAACGCCTTCGACGG
CAACAGCGACAGAACGCCATGTTGCCGCACAGCCGGCAAAGTCACCTGCG
GTATCGGCAAACCCAGTGGGATTTCGAACAAGCTCGTTCCCCTCGATGGA
TTCGTAACGTGCTGAATGAACTTCCTGATCGTAGTCTGGGCATTGGTCGA
GACCAGGAACCGGGTAGCACAGCTGGTATTGGTTGGGGTGCAGATGGCCG
AACATTGTAGGTGCCATGTCTTGAATGCTTCGAGGGTACACTTCAACTGA
CTGATTAGATACGTCGCCACTGTGGACGGAATCTTCGAATTCCAGGTCAA
TGTAACAGACAGGAAGACCTTCCCTGTCATCACCTATCGTTAACAAGTAA
TTCATGAGCCCTGTCACGGGTAAAGTTCTGGGATAGTTGCTGAGCACGAC
ATTTGCCTCAAGGTTGAGCGGCTCGTCCAACATCCCCATGACTCTTATTA
TTATTTACTATATTCTATTTGGATTTTGTGATGTGTTTTAGTTCGCGCGG
GTATATGAGAGGGCGCAGGGTCTGACGGATAATTGGCATTCAGCATACAA
GATTGAACGACTGGAGATAGAACACCATCTTTTGATGTTGAGGGGGGAAT
CGGGATTGTCCACGACGATGGATCCCTGGTTGTTCCCTGGCACCCCTTTT
CCAGCACGGGTATTTGCGCGTTTGTTTCGGGAGCATTCCGATTGTAACAT
TGGGTTCAAATCATCGTTTCGCATTTGCTTTTGGCGTTCTGGCGACTGTA
TATGACGAATGACTTTTTGTACAAGGACCACACACACTACCTTGTATTGT
TATTAGTAGGGCACATGAACAGGAATAAAAAGTTGTGATATTCTGTGC back to topCoding sequence (CDS) from alignment at ch5:2093157..2096554+ >KJC3_007306-T2 ID=KJC3_007306-T2|Name=KJC3_007306-T2|organism=Aspergillus niger KJC3|type=CDS|length=5760bp|location=Sequence derived from alignment at ch5:2093157..2096554+ (Aspergillus niger KJC3)
ATGCCTGGCGACGAACCTGGACCGGCTCGCCATGGCAATAGAAGGCAGGT
TCCAGAGGTGCAATTGCACAAGTTCGGAGGCAGTATCGTCAACTCAGTGA
CGATCCACCGTCTGCCTGGGGATGGAAAGGAGTTAGCGGAGGAAGATATA
GCCATTCTGAGTAACAACGATAAGACTGTTACCGTTTACTCCCTGGCCCG
GTCGAAAGTCCTCAAGGTGCTTCATCATCCGGCGTGCATGAACTATGCGA
TCATGTCACCAGATTCAACTATCCTTGCTGCGGTTGGTGATGAGACTCGT
GCATATTTCTATGATGTTACCCGCGACCTTGATGCTGTGACTGTAACGGA
TGAGGGTGACAAAGTTTGTGGGTGGAACTGGGACCTTCTTCGTTGTATAG
AAATGGACATAGGCACACGCTTTGACGATGGATGCTGTTTCACTGTCGCT
TTTTCTCAATTCAGTCGATTATGCGCGATCGGTTCGCAGTCTGGAGTCAT
CACCATCTTTGATGTGGGGACCATCCGCGATATTATACGCCAGCCCCAGG
GCCAGAATGCGATCATCTGTCGCTTCAACTCATCCAGAGCTTGTTGCAAT
GGAGGCGCTGTACGATGTATGGCGTTTGCACCTGAGCCCTGGGATCTTCT
GGTATGGCTCGAAGACAAGGGGCGAGCTGGGATTGCCGATGTTCGTCGCG
GTTTCGTTCGCAGGCAGATACTGGAATTGGATATGAACGAGCCCGAGTTG
CAGGAAGTCCGTACGGAGCCATTGCTAGATGACTTATTATTCGAACTCGA
TGGTCGAGCCTCCCCAGACACACGGCATGAACTCGACGCAACACAGCGAG
CGATTGACTCGTTAGAGGGAGCACTCCATAACCAAGGCGCGACGGGTTCC
GGCAACTCGCCACTAAGTGAGAGCCTGGTACAGGACCTCACAGAAAGAGA
GAGGCTGATTGTTGAATTTTTGAATACAGCGCGATGGACGTCGAGGATGG
AAGACGGGTTAGCGGAGCGGCGAGCTAGAGCTAATGCTCATCCTCACCCT
CCAGTGCGCCCCCGGTTCCACGGTCCCACAGATGAGGCCACTCGAGCCTC
CGGTCCTACTTCGCCTCCACCACGCAGTCATCCAAGCCGAGAGTTGTACC
AGGAAGACTCGCAATCGGGAACTGGTGATCGTAGTCAGCATGCGAGACGC
CGGGGCTCTGTCCTACTGACCCCTAGCCAGAATGAAGCCAGCAGTAGAAC
ACCCGAAATAGGACTGGCAAACCCCGATCCGCAGCCTAGTATTACACTCA
GCTGGACCGCTTCGCCCTCAGAGATCTACCCTAATCGATCAGACACCCCT
GCGCATGCTACAGATTCAAGCTCCAGTGAGCTTAACAGTTCTGGTAACGA
GCATGGCTCCGCGGCTCGGCTTCATGGCACAATGAACCGTCCGTCCGCCA
ATTTTGATTATTCTAATACCACAGCAGACTTGTTGCCCCCGCCAAGAAAC
CACCAACGATCCCGTTCAGGCCACAGACGGCTAGAGAGTCAGGATGGCAC
GCCCGAGGTCCTGCAAGACACACCGCGGCTCTCGGGCACCGAATTGAGAG
CCAGCGTGGCTGTGGAACGCCTTCGACGGCAACAGCGACAGAACGCCATG
TTGCCGCACAGCCGGCAAAGTCACCTGCGGTATCGGCAAACCCAGTGGGA
TTTCGAACAAGCTCGTTCCCCTCGATGGATTCGTAACGTGCTGAATGAAC
TTCCTGATCGTAGTCTGGGCATTGGTCGAGACCAGGAACCGGGTAGCACA
GCTGGTATTGGTTGGGGTGCAGATGGCCGAACATTATACGTCGCCACTGT
GGACGGAATCTTCGAATTCCAGGTCAATGTAACAGACAGGAAGACCTTCC
CTGTCATCACCTATCGTTAAATGCCTGGCGACGAACCTGGACCGGCTCGC
CATGGCAATAGAAGGCAGGTTCCAGAGGTGCAATTGCACAAGTTCGGAGG
CAGTATCGTCAACTCAGTGACGATCCACCGTCTGCCTGGGGATGGAAAGG
AGTTAGCGGAGGAAGATATAGCCATTCTGAGTAACAACGATAAGACTGTT
ACCGTTTACTCCCTGGCCCGGTCGAAAGTCCTCAAGGTGCTTCATCATCC
GGCGTGCATGAACTATGCGATCATGTCACCAGATTCAACTATCCTTGCTG
CGGTTGGTGATGAGACTCGTGCATATTTCTATGATGTTACCCGCGACCTT
GATGCTGTGACTGTAACGGATGAGGGTGACAAAGTTTGTGGGTGGAACTG
GGACCTTCTTCGTTGTATAGAAATGGACATAGGCACACGCTTTGACGATG
GATGCTGTTTCACTGTCGCTTTTTCTCAATTCAGTCGATTATGCGCGATC
GGTTCGCAGTCTGGAGTCATCACCATCTTTGATGTGGGGACCATCCGCGA
TATTATACGCCAGCCCCAGGGCCAGAATGCGATCATCTGTCGCTTCAACT
CATCCAGAGCTTGTTGCAATGGAGGCGCTGTACGATGTATGGCGTTTGCA
CCTGAGCCCTGGGATCTTCTGGTATGGCTCGAAGACAAGGGGCGAGCTGG
GATTGCCGATGTTCGTCGCGGTTTCGTTCGCAGGCAGATACTGGAATTGG
ATATGAACGAGCCCGAGTTGCAGGAAGTCCGTACGGAGCCATTGCTAGAT
GACTTATTATTCGAACTCGATGGTCGAGCCTCCCCAGACACACGGCATGA
ACTCGACGCAACACAGCGAGCGATTGACTCGTTAGAGGGAGCACTCCATA
ACCAAGGCGCGACGGGTTCCGGCAACTCGCCACTAAGTGAGAGCCTGGTA
CAGGACCTCACAGAAAGAGAGAGGCTGATTGTTGAATTTTTGAATACAGC
GCGATGGACGTCGAGGATGGAAGACGGGTTAGCGGAGCGGCGAGCTAGAG
CTAATGCTCATCCTCACCCTCCAGTGCGCCCCCGGTTCCACGGTCCCACA
GATGAGGCCACTCGAGCCTCCGGTCCTACTTCGCCTCCACCACGCAGTCA
TCCAAGCCGAGAGTTGTACCAGGAAGACTCGCAATCGGGAACTGGTGATC
GTAGTCAGCATGCGAGACGCCGGGGCTCTGTCCTACTGACCCCTAGCCAG
AATGAAGCCAGCAGTAGAACACCCGAAATAGGACTGGCAAACCCCGATCC
GCAGCCTAGTATTACACTCAGCTGGACCGCTTCGCCCTCAGAGATCTACC
CTAATCGATCAGACACCCCTGCGCATGCTACAGATTCAAGCTCCAGTGAG
CTTAACAGTTCTGGTAACGAGCATGGCTCCGCGGCTCGGCTTCATGGCAC
AATGAACCGTCCGTCCGCCAATTTTGATTATTCTAATACCACAGCAGACT
TGTTGCCCCCGCCAAGAAACCACCAACGATCCCGTTCAGGCCACAGACGG
CTAGAGAGTCAGGATGGCACGCCCGAGGTCCTGCAAGACACACCGCGGCT
CTCGGGCACCGAATTGAGAGCCAGCGTGGCTGTGGAACGCCTTCGACGGC
AACAGCGACAGAACGCCATGTTGCCGCACAGCCGGCAAAGTCACCTGCGG
TATCGGCAAACCCAGTGGGATTTCGAACAAGCTCGTTCCCCTCGATGGAT
TCGTAACGTGCTGAATGAACTTCCTGATCGTAGTCTGGGCATTGGTCGAG
ACCAGGAACCGGGTAGCACAGCTGGTATTGGTTGGGGTGCAGATGGCCGA
ACATTATACGTCGCCACTGTGGACGGAATCTTCGAATTCCAGGTCAATGT
AACAGACAGGAAGACCTTCCCTGTCATCACCTATCGTTAAATGCCTGGCG
ACGAACCTGGACCGGCTCGCCATGGCAATAGAAGGCAGGTTCCAGAGGTG
CAATTGCACAAGTTCGGAGGCAGTATCGTCAACTCAGTGACGATCCACCG
TCTGCCTGGGGATGGAAAGGAGTTAGCGGAGGAAGATATAGCCATTCTGA
GTAACAACGATAAGACTGTTACCGTTTACTCCCTGGCCCGGTCGAAAGTC
CTCAAGGTGCTTCATCATCCGGCGTGCATGAACTATGCGATCATGTCACC
AGATTCAACTATCCTTGCTGCGGTTGGTGATGAGACTCGTGCATATTTCT
ATGATGTTACCCGCGACCTTGATGCTGTGACTGTAACGGATGAGGGTGAC
AAAGTTTGTGGGTGGAACTGGGACCTTCTTCGTTGTATAGAAATGGACAT
AGGCACACGCTTTGACGATGGATGCTGTTTCACTGTCGCTTTTTCTCAAT
TCAGTCGATTATGCGCGATCGGTTCGCAGTCTGGAGTCATCACCATCTTT
GATGTGGGGACCATCCGCGATATTATACGCCAGCCCCAGGGCCAGAATGC
GATCATCTGTCGCTTCAACTCATCCAGAGCTTGTTGCAATGGAGGCGCTG
TACGATGTATGGCGTTTGCACCTGAGCCCTGGGATCTTCTGGTATGGCTC
GAAGACAAGGGGCGAGCTGGGATTGCCGATGTTCGTCGCGGTTTCGTTCG
CAGGCAGATACTGGAATTGGATATGAACGAGCCCGAGTTGCAGGAAGTCC
GTACGGAGCCATTGCTAGATGACTTATTATTCGAACTCGATGGTCGAGCC
TCCCCAGACACACGGCATGAACTCGACGCAACACAGCGAGCGATTGACTC
GTTAGAGGGAGCACTCCATAACCAAGGCGCGACGGGTTCCGGCAACTCGC
CACTAAGTGAGAGCCTGGTACAGGACCTCACAGAAAGAGAGAGGCTGATT
GTTGAATTTTTGAATACAGCGCGATGGACGTCGAGGATGGAAGACGGGTT
AGCGGAGCGGCGAGCTAGAGCTAATGCTCATCCTCACCCTCCAGTGCGCC
CCCGGTTCCACGGTCCCACAGATGAGGCCACTCGAGCCTCCGGTCCTACT
TCGCCTCCACCACGCAGTCATCCAAGCCGAGAGTTGTACCAGGAAGACTC
GCAATCGGGAACTGGTGATCGTAGTCAGCATGCGAGACGCCGGGGCTCTG
TCCTACTGACCCCTAGCCAGAATGAAGCCAGCAGTAGAACACCCGAAATA
GGACTGGCAAACCCCGATCCGCAGCCTAGTATTACACTCAGCTGGACCGC
TTCGCCCTCAGAGATCTACCCTAATCGATCAGACACCCCTGCGCATGCTA
CAGATTCAAGCTCCAGTGAGCTTAACAGTTCTGGTAACGAGCATGGCTCC
GCGGCTCGGCTTCATGGCACAATGAACCGTCCGTCCGCCAATTTTGATTA
TTCTAATACCACAGCAGACTTGTTGCCCCCGCCAAGAAACCACCAACGAT
CCCGTTCAGGCCACAGACGGCTAGAGAGTCAGGATGGCACGCCCGAGGTC
CTGCAAGACACACCGCGGCTCTCGGGCACCGAATTGAGAGCCAGCGTGGC
TGTGGAACGCCTTCGACGGCAACAGCGACAGAACGCCATGTTGCCGCACA
GCCGGCAAAGTCACCTGCGGTATCGGCAAACCCAGTGGGATTTCGAACAA
GCTCGTTCCCCTCGATGGATTCGTAACGTGCTGAATGAACTTCCTGATCG
TAGTCTGGGCATTGGTCGAGACCAGGAACCGGGTAGCACAGCTGGTATTG
GTTGGGGTGCAGATGGCCGAACATTATACGTCGCCACTGTGGACGGAATC
TTCGAATTCCAGGTCAATGTAACAGACAGGAAGACCTTCCCTGTCATCAC
CTATCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007306-T2.utr3p1 | KJC3_007306-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR019417 |
| DBxref | PFAM:PF10313 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2093157..2096554 + |
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