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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2093157..2096554+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007306-T3 ID=KJC3_007306-T3|Name=KJC3_007306-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3398bp|location=Sequence derived from alignment at ch5:2093157..2096554+ (Aspergillus niger KJC3)
GAGCAGAGCAGAGCAGACAGAGAGAGAGGGAGAGGAGGTATCTGGTGCTG
GTGGTGTGCTCTCTACTTTACACTACTTTACTCGAACAAGCTCTAGCTTT
CAACTTCCACTCTCAGACTAGACCCTGTTGTCAATACCCTGCGACACCGG
CCTCCTTTTCAGCTGTTTCCCTTCCCATTACTTCTTTTCTTTTTCGCCGT
CGCTATTACTCGCCATCGACTCTTCTGTTCCCTCTGTGTTGTCCGTCCTC
TTTTTTCCGCAACATCGGAGCTCCGCCATAGCTGTACTTCCGACCATGTC
ACCTTAAAATATAATATCGACGTTCTTTCACAATGACTACGGATTCGCTC
GCGTCAGTCTCCTGCTTCCCTTCCCACTCAGGTGATCCAACTGGCCGATT
GCTAATGTCGTAACGATCTGCAGGCATCATCCGACGGAGTCTCTTATCCT
TCCCAACAAGCGCCGCTTCTTCCCCTTCAAAATTCCCAACTTGTCTGTAC
ATTGAGCTCGCAGAAAAGCAGACTGATCAGTGCTAATCATGAGACAGTCA
TCAACAACTTCGCAACTATATTAGCACCGCGGACCCGGACAGGATCTACG
TTGTCGTCGAGCGAGTCATCTACTCGATTCACATTTCATCACAAAAGCGG
GAGACCATTGCCGTTATTCCGTTTGAGCCAAAATGTCTTGCTGCTGGTTA
CGGCTGGATTGGGGTGGGGGGCGCCGATAATGGAGAATGCGCATTTGTTG
GGCTATCGTCCGATCGGAGTCCGCGCGCCCGTGCCGATACACCGGCTTTC
CAGCCGTCGGACGTGGACAGTGCTTTGCCAATCGATCTTGACCCTCCTGC
GAGGATATCGCCGCCTTGGATGCCTGGCGACGAACCTGGACCGGCTCGCC
ATGGCAATAGAAGGCAGGTTCCAGAGGTGCAATTGCACAAGTTCGGAGGC
AGTATCGTCAACTCAGTGACGATCCACCGTCTGCCTGGGGATGGAAAGGA
GTTAGCGGAGGAAGATATAGCCATTCTGAGGTATGGGCATGGCAATTTTC
CGAATCACCTGAGATGCTGATTGCTTTTGCAGTAACAACGATAAGACTGT
TACCGTTTACTCCCTGGCCCGGTCGAAAGTCCTCAAGGTGCTTCATCATC
CGGCGTGCATGAACTATGCGATCATGTCACCAGATTCAACTATCCTTGCT
GCGGTTGGTGATGAGACTCGTGCATATTTCTATGATGTTACCCGCGACCT
TGATGCTGTGACTGTAACGGATGAGGGTGACAAAGTTTGTGGGTGGAACT
GGGACCTTCTTCGTTGTATAGAAATGGACATAGGCACACGCTTTGACGAT
GGATGCTGTTTCACTGTCGCTTTTTCTCAATTCAGTCGATTATGCGCGAT
CGGTTCGCAGTCTGGAGTCATCACCATCTTTGATGTGGGGACCATCCGCG
ATATTATACGCCAGCCCCAGGGCCAGAATGCGATCATCTGTCGCTTCAAC
TCATCCAGAGCTTGTTGCAATGGAGGCGCTGTACGATGTATGGCGTTTGC
ACCTGAGCCCTGGGATCTTCTGGTATGGCTCGAAGACAAGGGGCGAGCTG
GGATTGCCGATGTTCGTCGCGGTTTCGTTCGCAGGCAGATACTGGAATTG
GATATGAACGAGCCCGAGTTGCAGGAAGTCCGTACGGAGCCATTGCTAGA
TGACTTATTATTCGAACTCGATGGTCGAGCCTCCCCAGACACACGGCATG
AACTCGACGCAACACAGCGAGCGATTGACTCGTTAGAGGGAGCACTCCAT
AACCAAGGCGCGACGGGTTCCGGCAACTCGCCACTAAGTGAGAGCCTGGT
ACAGGACCTCACAGAAAGAGAGAGGCTGATTGTTGAATTTTTGAATACAG
CGCGATGGACGTCGAGGATGGAAGACGGGTTAGCGGAGCGGCGAGCTAGA
GCTAATGCTCATCCTCACCCTCCAGTGCGCCCCCGGTTCCACGGTCCCAC
AGATGAGGCCACTCGAGCCTCCGGTCCTACTTCGCCTCCACCACGCAGTC
ATCCAAGCCGAGAGTTGTACCAGGAAGACTCGCAATCGGGAACTGGTGAT
CGTAGTCAGCATGCGAGACGCCGGGGCTCTGTCCTACTGACCCCTAGCCA
GAATGAAGCCAGCAGTAGAACACCCGAAATAGGACTGGCAAACCCCGATC
CGCAGCCTAGTATTACACTCAGCTGGACCGCTTCGCCCTCAGAGATCTAC
CCTAATCGATCAGACACCCCTGCGCATGCTACAGATTCAAGCTCCAGTGA
GCTTAACAGTTCTGGTAACGAGCATGGCTCCGCGGCTCGGCTTCATGGCA
CAATGAACCGTCCGTCCGCCAATTTTGATTATTCTAATACCACAGCAGAC
TTGTTGCCCCCGCCAAGAAACCACCAACGATCCCGTTCAGGCCACAGACG
GCTAGAGAGTCAGGATGGCACGCCCGAGGTCCTGCAAGACACACCGCGGC
TCTCGGGCACCGAATTGAGAGCCAGCGTGGCTGTGGAACGCCTTCGACGG
CAACAGCGACAGAACGCCATGTTGCCGCACAGCCGGCAAAGTCACCTGCG
GTATCGGCAAACCCAGTGGGATTTCGAACAAGCTCGTTCCCCTCGATGGA
TTCGTAACGTGCTGAATGAACTTCCTGATCGTAGTCTGGGCATTGGTCGA
GACCAGGAACCGGGTAGCACAGCTGGTATTGGTTGGGGTGCAGATGGCCG
AACATTGTAGGTGCCATGTCTTGAATGCTTCGAGGGTACACTTCAACTGA
CTGATTAGATACGTCGCCACTGTGGACGGAATCTTCGAATTCCAGGTCAA
TGTAACAGACAGGAAGACCTTCCCTGTCATCACCTATCGTTAACAAGTAA
TTCATGAGCCCTGTCACGGGTAAAGTTCTGGGATAGTTGCTGAGCACGAC
ATTTGCCTCAAGGTTGAGCGGCTCGTCCAACATCCCCATGACTCTTATTA
TTATTTACTATATTCTATTTGGATTTTGTGATGTGTTTTAGTTCGCGCGG
GTATATGAGAGGGCGCAGGGTCTGACGGATAATTGGCATTCAGCATACAA
GATTGAACGACTGGAGATAGAACACCATCTTTTGATGTTGAGGGGGGAAT
CGGGATTGTCCACGACGATGGATCCCTGGTTGTTCCCTGGCACCCCTTTT
CCAGCACGGGTATTTGCGCGTTTGTTTCGGGAGCATTCCGATTGTAACAT
TGGGTTCAAATCATCGTTTCGCATTTGCTTTTGGCGTTCTGGCGACTGTA
TATGACGAATGACTTTTTGTACAAGGACCACACACACTACCTTGTATTGT
TATTAGTAGGGCACATGAACAGGAATAAAAAGTTGTGATATTCTGTGC back to topCoding sequence (CDS) from alignment at ch5:2093157..2096554+ >KJC3_007306-T3 ID=KJC3_007306-T3|Name=KJC3_007306-T3|organism=Aspergillus niger KJC3|type=CDS|length=4860bp|location=Sequence derived from alignment at ch5:2093157..2096554+ (Aspergillus niger KJC3)
ATGAACTATGCGATCATGTCACCAGATTCAACTATCCTTGCTGCGGTTGG
TGATGAGACTCGTGCATATTTCTATGATGTTACCCGCGACCTTGATGCTG
TGACTGTAACGGATGAGGGTGACAAAGTTTGTGGGTGGAACTGGGACCTT
CTTCGTTGTATAGAAATGGACATAGGCACACGCTTTGACGATGGATGCTG
TTTCACTGTCGCTTTTTCTCAATTCAGTCGATTATGCGCGATCGGTTCGC
AGTCTGGAGTCATCACCATCTTTGATGTGGGGACCATCCGCGATATTATA
CGCCAGCCCCAGGGCCAGAATGCGATCATCTGTCGCTTCAACTCATCCAG
AGCTTGTTGCAATGGAGGCGCTGTACGATGTATGGCGTTTGCACCTGAGC
CCTGGGATCTTCTGGTATGGCTCGAAGACAAGGGGCGAGCTGGGATTGCC
GATGTTCGTCGCGGTTTCGTTCGCAGGCAGATACTGGAATTGGATATGAA
CGAGCCCGAGTTGCAGGAAGTCCGTACGGAGCCATTGCTAGATGACTTAT
TATTCGAACTCGATGGTCGAGCCTCCCCAGACACACGGCATGAACTCGAC
GCAACACAGCGAGCGATTGACTCGTTAGAGGGAGCACTCCATAACCAAGG
CGCGACGGGTTCCGGCAACTCGCCACTAACGCGATGGACGTCGAGGATGG
AAGACGGGTTAGCGGAGCGGCGAGCTAGAGCTAATGCTCATCCTCACCCT
CCAGTGCGCCCCCGGTTCCACGGTCCCACAGATGAGGCCACTCGAGCCTC
CGGTCCTACTTCGCCTCCACCACGCAGTCATCCAAGCCGAGAGTTGTACC
AGGAAGACTCGCAATCGGGAACTGGTGATCGTAGTCAGCATGCGAGACGC
CGGGGCTCTGTCCTACTGACCCCTAGCCAGAATGAAGCCAGCAGTAGAAC
ACCCGAAATAGGACTGGCAAACCCCGATCCGCAGCCTAGTATTACACTCA
GCTGGACCGCTTCGCCCTCAGAGATCTACCCTAATCGATCAGACACCCCT
GCGCATGCTACAGATTCAAGCTCCAGTGAGCTTAACAGTTCTGGTAACGA
GCATGGCTCCGCGGCTCGGCTTCATGGCACAATGAACCGTCCGTCCGCCA
ATTTTGATTATTCTAATACCACAGCAGACTTGTTGCCCCCGCCAAGAAAC
CACCAACGATCCCGTTCAGGCCACAGACGGCTAGAGAGTCAGGATGGCAC
GCCCGAGGTCCTGCAAGACACACCGCGGCTCTCGGGCACCGAATTGAGAG
CCAGCGTGGCTGTGGAACGCCTTCGACGGCAACAGCGACAGAACGCCATG
TTGCCGCACAGCCGGCAAAGTCACCTGCGGTATCGGCAAACCCAGTGGGA
TTTCGAACAAGCTCGTTCCCCTCGATGGATTCGTAACGTGCTGAATGAAC
TTCCTGATCGTAGTCTGGGCATTGGTCGAGACCAGGAACCGGGTAGCACA
GCTGGTATTGGTTGGGGTGCAGATGGCCGAACATTATACGTCGCCACTGT
GGACGGAATCTTCGAATTCCAGGTCAATGTAACAGACAGGAAGACCTTCC
CTGTCATCACCTATCGTTAAATGAACTATGCGATCATGTCACCAGATTCA
ACTATCCTTGCTGCGGTTGGTGATGAGACTCGTGCATATTTCTATGATGT
TACCCGCGACCTTGATGCTGTGACTGTAACGGATGAGGGTGACAAAGTTT
GTGGGTGGAACTGGGACCTTCTTCGTTGTATAGAAATGGACATAGGCACA
CGCTTTGACGATGGATGCTGTTTCACTGTCGCTTTTTCTCAATTCAGTCG
ATTATGCGCGATCGGTTCGCAGTCTGGAGTCATCACCATCTTTGATGTGG
GGACCATCCGCGATATTATACGCCAGCCCCAGGGCCAGAATGCGATCATC
TGTCGCTTCAACTCATCCAGAGCTTGTTGCAATGGAGGCGCTGTACGATG
TATGGCGTTTGCACCTGAGCCCTGGGATCTTCTGGTATGGCTCGAAGACA
AGGGGCGAGCTGGGATTGCCGATGTTCGTCGCGGTTTCGTTCGCAGGCAG
ATACTGGAATTGGATATGAACGAGCCCGAGTTGCAGGAAGTCCGTACGGA
GCCATTGCTAGATGACTTATTATTCGAACTCGATGGTCGAGCCTCCCCAG
ACACACGGCATGAACTCGACGCAACACAGCGAGCGATTGACTCGTTAGAG
GGAGCACTCCATAACCAAGGCGCGACGGGTTCCGGCAACTCGCCACTAAC
GCGATGGACGTCGAGGATGGAAGACGGGTTAGCGGAGCGGCGAGCTAGAG
CTAATGCTCATCCTCACCCTCCAGTGCGCCCCCGGTTCCACGGTCCCACA
GATGAGGCCACTCGAGCCTCCGGTCCTACTTCGCCTCCACCACGCAGTCA
TCCAAGCCGAGAGTTGTACCAGGAAGACTCGCAATCGGGAACTGGTGATC
GTAGTCAGCATGCGAGACGCCGGGGCTCTGTCCTACTGACCCCTAGCCAG
AATGAAGCCAGCAGTAGAACACCCGAAATAGGACTGGCAAACCCCGATCC
GCAGCCTAGTATTACACTCAGCTGGACCGCTTCGCCCTCAGAGATCTACC
CTAATCGATCAGACACCCCTGCGCATGCTACAGATTCAAGCTCCAGTGAG
CTTAACAGTTCTGGTAACGAGCATGGCTCCGCGGCTCGGCTTCATGGCAC
AATGAACCGTCCGTCCGCCAATTTTGATTATTCTAATACCACAGCAGACT
TGTTGCCCCCGCCAAGAAACCACCAACGATCCCGTTCAGGCCACAGACGG
CTAGAGAGTCAGGATGGCACGCCCGAGGTCCTGCAAGACACACCGCGGCT
CTCGGGCACCGAATTGAGAGCCAGCGTGGCTGTGGAACGCCTTCGACGGC
AACAGCGACAGAACGCCATGTTGCCGCACAGCCGGCAAAGTCACCTGCGG
TATCGGCAAACCCAGTGGGATTTCGAACAAGCTCGTTCCCCTCGATGGAT
TCGTAACGTGCTGAATGAACTTCCTGATCGTAGTCTGGGCATTGGTCGAG
ACCAGGAACCGGGTAGCACAGCTGGTATTGGTTGGGGTGCAGATGGCCGA
ACATTATACGTCGCCACTGTGGACGGAATCTTCGAATTCCAGGTCAATGT
AACAGACAGGAAGACCTTCCCTGTCATCACCTATCGTTAAATGAACTATG
CGATCATGTCACCAGATTCAACTATCCTTGCTGCGGTTGGTGATGAGACT
CGTGCATATTTCTATGATGTTACCCGCGACCTTGATGCTGTGACTGTAAC
GGATGAGGGTGACAAAGTTTGTGGGTGGAACTGGGACCTTCTTCGTTGTA
TAGAAATGGACATAGGCACACGCTTTGACGATGGATGCTGTTTCACTGTC
GCTTTTTCTCAATTCAGTCGATTATGCGCGATCGGTTCGCAGTCTGGAGT
CATCACCATCTTTGATGTGGGGACCATCCGCGATATTATACGCCAGCCCC
AGGGCCAGAATGCGATCATCTGTCGCTTCAACTCATCCAGAGCTTGTTGC
AATGGAGGCGCTGTACGATGTATGGCGTTTGCACCTGAGCCCTGGGATCT
TCTGGTATGGCTCGAAGACAAGGGGCGAGCTGGGATTGCCGATGTTCGTC
GCGGTTTCGTTCGCAGGCAGATACTGGAATTGGATATGAACGAGCCCGAG
TTGCAGGAAGTCCGTACGGAGCCATTGCTAGATGACTTATTATTCGAACT
CGATGGTCGAGCCTCCCCAGACACACGGCATGAACTCGACGCAACACAGC
GAGCGATTGACTCGTTAGAGGGAGCACTCCATAACCAAGGCGCGACGGGT
TCCGGCAACTCGCCACTAACGCGATGGACGTCGAGGATGGAAGACGGGTT
AGCGGAGCGGCGAGCTAGAGCTAATGCTCATCCTCACCCTCCAGTGCGCC
CCCGGTTCCACGGTCCCACAGATGAGGCCACTCGAGCCTCCGGTCCTACT
TCGCCTCCACCACGCAGTCATCCAAGCCGAGAGTTGTACCAGGAAGACTC
GCAATCGGGAACTGGTGATCGTAGTCAGCATGCGAGACGCCGGGGCTCTG
TCCTACTGACCCCTAGCCAGAATGAAGCCAGCAGTAGAACACCCGAAATA
GGACTGGCAAACCCCGATCCGCAGCCTAGTATTACACTCAGCTGGACCGC
TTCGCCCTCAGAGATCTACCCTAATCGATCAGACACCCCTGCGCATGCTA
CAGATTCAAGCTCCAGTGAGCTTAACAGTTCTGGTAACGAGCATGGCTCC
GCGGCTCGGCTTCATGGCACAATGAACCGTCCGTCCGCCAATTTTGATTA
TTCTAATACCACAGCAGACTTGTTGCCCCCGCCAAGAAACCACCAACGAT
CCCGTTCAGGCCACAGACGGCTAGAGAGTCAGGATGGCACGCCCGAGGTC
CTGCAAGACACACCGCGGCTCTCGGGCACCGAATTGAGAGCCAGCGTGGC
TGTGGAACGCCTTCGACGGCAACAGCGACAGAACGCCATGTTGCCGCACA
GCCGGCAAAGTCACCTGCGGTATCGGCAAACCCAGTGGGATTTCGAACAA
GCTCGTTCCCCTCGATGGATTCGTAACGTGCTGAATGAACTTCCTGATCG
TAGTCTGGGCATTGGTCGAGACCAGGAACCGGGTAGCACAGCTGGTATTG
GTTGGGGTGCAGATGGCCGAACATTATACGTCGCCACTGTGGACGGAATC
TTCGAATTCCAGGTCAATGTAACAGACAGGAAGACCTTCCCTGTCATCAC
CTATCGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007306-T3.utr3p1 | KJC3_007306-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR019417 |
| DBxref | InterPro:IPR015943 |
| DBxref | PFAM:PF10313 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2093157..2096554 + |
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