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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2123285..2125128+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007316-T1 ID=KJC3_007316-T1|Name=KJC3_007316-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1844bp|location=Sequence derived from alignment at ch5:2123285..2125128+ (Aspergillus niger KJC3)
CCCGGCGGCTTTATCTGGTCGACCTCGTTGTATCCGGCTATCGCTTTGTT
GGCATCTGCTTTGGGCCTTAATTCACGTCGTGCTTTATGTCTGGCACTAA
GACGTGAATTAGGCTTATCTCTAATCTGAAAACGATTGATTTTTAGTGGT
TCCGCAACGAAGTCATGAAGGTACCCCGTCATACTAACCACCGACGGTGA
AACTACCCCCCTTCGTGACTACTCATATTCGATAGCTTTTGGCGCTTTCT
TTGGCTACTAGGTGACAAAATGAGTGTAAGGAACCCATGAAAGCTTGCTG
TTTGATGGCTTTTGCTGATCATACGACAGTTTCTCGATTCCGTTCTTTCG
TCCATCGAGACGGGTAAACCGTCTCCAATCCCCCCCACCTCTGCCTCACC
GTCGCCTCCTGTAACCTCTTCAAATGTCAAGACCGAGGTCCGCAAACCGG
TCAGCGTCCCTCGAGATGGCGCTTCAGAGCGCAAACCTCTGGTTTCTGGA
ATCAAGCGAAAGGCCGAGGAGCAGCTAGCTCGTCCTGCAAAATCTGTTAC
CCCAGCACCTACCAGGGCAGCAGCAACAACAACAACATCATCATCAACGA
CCAATACCACTACCACGGCGAAGACTACCGTATCTACAGCTCCTAGACCT
CGTCCAAGCGCGCCTTCTACGACAGCAACGTCTGCAGTCAAGAGCCGCTC
TTCAACCCCTCAGCAGAAGGCGCCTCCAGTGTCATCGAAGCCTCCCCCTA
AAGGCTCTTTCGCGGATCTCATGGCCAAGGCCAAAGCATTACAAGAGAAG
GCGCCGACTCAAGTTGGCATGTTCAAACATCAATCTGCCCCCAAGGAGAA
GCTTAGCAAAGTCGAACGCAAGAAGAAGGCAGTGGAGGCGCAGACCAAGG
ATAAAGATGTGCGGTCGGCCAAGAAGGCAGGCGTTACTGCTGGTGGAGCT
GCAGGCACGAAAGCCGGTGACGGCAAAGTCGTCAAGAAGCGGGAACCTGA
GCCATTATCCTACAAAGGGACCGCCAGACCGACCCCGTCTACAGGCCAGC
CCGAGTACCGAGGAACCGCCGGTCTGCCTCCACGCAAAACACCTGGTGAC
CGGAAAGCACAGTCGCGATCCAGGCCTCGTATGGATGAGTACCTCGGTAC
TGATGAGGAAGACGAGGGCGAGTATGCCGATGACTACGATGATTACTATT
CAGAATCTTCCGATATGGAGGCGGGCTTGTACGATGTGGAGGAAGAGGAA
GCTGCTGCACTGGCGGCCGCCCGACGGGAAGACGAGGAGGAATGGCGCGC
GGAGCTTGCCGCCAAGCAGCAGAAATTGGAGCGTCGCAAGAAGCTCGCTT
CACTGGCATCGCGACGATAAGAAGCAGTCCTTTGCTTCCACGACATACCT
ACCTACCTAATCAAACCTTTTGCCAGTCCTGCAAGCCGATTCACCTGGAC
TTCAACAACATTTTTCCCTTGGATTTTTCCCTTTTGTTTTCATTGTTTTC
TTGTTTGGTTACGGAGCATCAGCGAGGAATACCCCGAGGGTGCGTTACAT
ACGACGTTACTGGTCTTCTTTGTTTTCATTTGTTCAATTCTGTACCAATT
TTGGAAGAGCATCAGCGAGCGTCAAGGTGTCGATAGATGGAGGGCGATTT
CTTCATTTTCACTTCACATATTAACATTGCTAGTTACATACAATAGCGGG
CGTGTCTGTTACTGTCACTGTTCTCGTGGTAGCATTAAATGCGATTGGAT
AGCTGCAAATATTGACCACTCTCATCGTCATTGCTGGTAATCTAATTATA
TAGTAAGGATTAAGCAAAGCAATCAAGACCGGATTCTTATCGAG back to topCoding sequence (CDS) from alignment at ch5:2123285..2125128+ >KJC3_007316-T1 ID=KJC3_007316-T1|Name=KJC3_007316-T1|organism=Aspergillus niger KJC3|type=CDS|length=2094bp|location=Sequence derived from alignment at ch5:2123285..2125128+ (Aspergillus niger KJC3)
ATGAGTTTTCTCGATTCCGTTCTTTCGTCCATCGAGACGGGTAAACCGTC
TCCAATCCCCCCCACCTCTGCCTCACCGTCGCCTCCTGTAACCTCTTCAA
ATGTCAAGACCGAGGTCCGCAAACCGGTCAGCGTCCCTCGAGATGGCGCT
TCAGAGCGCAAACCTCTGGTTTCTGGAATCAAGCGAAAGGCCGAGGAGCA
GCTAGCTCGTCCTGCAAAATCTGTTACCCCAGCACCTACCAGGGCAGCAG
CAACAACAACAACATCATCATCAACGACCAATACCACTACCACGGCGAAG
ACTACCGTATCTACAGCTCCTAGACCTCGTCCAAGCGCGCCTTCTACGAC
AGCAACGTCTGCAGTCAAGAGCCGCTCTTCAACCCCTCAGCAGAAGGCGC
CTCCAGTGTCATCGAAGCCTCCCCCTAAAGGCTCTTTCGCGGATCTCATG
GCCAAGGCCAAAGCATTACAAGAGAAGGCGCCGACTCAAGTTGGCATGTT
CAAACATCAATCTGCCCCCAAGGAGAAGCTTAGCAAAGTCGAACGCAAGA
AGAAGGCAGTGGAGGCGCAGACCAAGGATAAAGATGTGCGGTCGGCCAAG
AAGGCAGGCGTTACTGCTGGTGGAGCTGCAGGCACGAAAGCCGGTGACGG
CAAAGTCGTCAAGAAGCGGGAACCTGAGCCATTATCCTACAAAGGGACCG
CCAGACCGACCCCGTCTACAGGCCAGCCCGAGTACCGAGGAACCGCCGGT
CTGCCTCCACGCAAAACACCTGGTGACCGGAAAGCACAGTCGCGATCCAG
GCCTCGTATGGATGAGTACCTCGGTACTGATGAGGAAGACGAGGGCGAGT
ATGCCGATGACTACGATGATTACTATTCAGAATCTTCCGATATGGAGGCG
GGCTTGTACGATGTGGAGGAAGAGGAAGCTGCTGCACTGGCGGCCGCCCG
ACGGGAAGACGAGGAGGAATGGCGCGCGGAGCTTGCCGCCAAGCAGCAGA
AATTGGAGCGTCGCAAGAAGCTCGCTTCACTGGCATCGCGACGATAAATG
AGTTTTCTCGATTCCGTTCTTTCGTCCATCGAGACGGGTAAACCGTCTCC
AATCCCCCCCACCTCTGCCTCACCGTCGCCTCCTGTAACCTCTTCAAATG
TCAAGACCGAGGTCCGCAAACCGGTCAGCGTCCCTCGAGATGGCGCTTCA
GAGCGCAAACCTCTGGTTTCTGGAATCAAGCGAAAGGCCGAGGAGCAGCT
AGCTCGTCCTGCAAAATCTGTTACCCCAGCACCTACCAGGGCAGCAGCAA
CAACAACAACATCATCATCAACGACCAATACCACTACCACGGCGAAGACT
ACCGTATCTACAGCTCCTAGACCTCGTCCAAGCGCGCCTTCTACGACAGC
AACGTCTGCAGTCAAGAGCCGCTCTTCAACCCCTCAGCAGAAGGCGCCTC
CAGTGTCATCGAAGCCTCCCCCTAAAGGCTCTTTCGCGGATCTCATGGCC
AAGGCCAAAGCATTACAAGAGAAGGCGCCGACTCAAGTTGGCATGTTCAA
ACATCAATCTGCCCCCAAGGAGAAGCTTAGCAAAGTCGAACGCAAGAAGA
AGGCAGTGGAGGCGCAGACCAAGGATAAAGATGTGCGGTCGGCCAAGAAG
GCAGGCGTTACTGCTGGTGGAGCTGCAGGCACGAAAGCCGGTGACGGCAA
AGTCGTCAAGAAGCGGGAACCTGAGCCATTATCCTACAAAGGGACCGCCA
GACCGACCCCGTCTACAGGCCAGCCCGAGTACCGAGGAACCGCCGGTCTG
CCTCCACGCAAAACACCTGGTGACCGGAAAGCACAGTCGCGATCCAGGCC
TCGTATGGATGAGTACCTCGGTACTGATGAGGAAGACGAGGGCGAGTATG
CCGATGACTACGATGATTACTATTCAGAATCTTCCGATATGGAGGCGGGC
TTGTACGATGTGGAGGAAGAGGAAGCTGCTGCACTGGCGGCCGCCCGACG
GGAAGACGAGGAGGAATGGCGCGCGGAGCTTGCCGCCAAGCAGCAGAAAT
TGGAGCGTCGCAAGAAGCTCGCTTCACTGGCATCGCGACGATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007316-T1.utr3p1 | KJC3_007316-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013256 |
| DBxref | PFAM:PF08243 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2123285..2125128 + |
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