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KJC3_007324-T1, KJC3_007324-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007324-T1
Unique NameKJC3_007324-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2145244..2146513-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007324-T1 ID=KJC3_007324-T1|Name=KJC3_007324-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1270bp|location=Sequence derived from alignment at ch5:2145244..2146513- (Aspergillus niger KJC3)
CTCAAAAACATCATCATCCCCTCTCGGCATTACTAATCCGTTCTCCGCAC
CAAGCCGGGCCTTAACAAGACAAGCTCTGGAGCTTCAAGCTCAAACCCTA
GCTCTCAATCTTCTCTATCAGATTTCCACTAATTGATACAGCTCTATCTA
ATATATCAATCAAATCGACACATCTATCACAACCATGCAAGTCCTCCTCC
TAGGCGGCCACGGCAAAGTGGCTCTGCAACTGACCCCGCTTCTCCTCGCC
CGCTCCTGGAACGTCACCAGCGTCATCCGCAACGCAGAGCACGAGAACGA
GATCCTTGCTTTAGGCAAAGGCGCCAAAGGCAAACTGAGCGTCCTCCTCT
CCAGCCTCGACGATATCAAAAGCGACGCCGATGCCAAAAATGTCCTCGAC
CGCGTTTCCCCAGACTATGTAGTCTGGTCTGCAGGTATGTATGCCAACAT
GCAGAAAGCCGTGGTTGAGATTGAAACATCCCCCTTCCCTTCCCCAGTGC
CCACAACACTGTTAAGACATCTATCTGCATCATTCCCCCTGCACACCTGC
AAGTCCAGCTCAAATCCACACATCACATCCAACGCTCCATCCATCCAACG
GTTCCCCCCTCCTCCCCAAAGTACCACTTACCACCCAACTAACCACCCCA
TTTCTCGTAACCCAGGAGCCGGCGGCAAAGGTGGACCCGCACGCACGCAC
GCCATCGATGAAGTAGCAGCGAAGCATTTCCTCAGCGCCTCATTCTCACA
CCCCAGCGTACGTAAATTCCTCCTCGTCTCCTGGATCGGCAGCCGACGCA
AGCAACCCACCTGGCTGTCTGACGACGAATGGGCGGGCCTCCAAAACGTC
TTCTACAACGTCCTCCCCGCATATGCCAAGGCCAAGCTGGAAGCGGACGA
GTACATGACCGCGTTGGCGGCGGCGCGCAAGAAGCTTGTTGCTGCGGGGG
CGGCGCAGCCGCTGCAGGCGATTAATCTGCGACCGGGGACGTTGACGGAT
ACGCCTGCGACGAGGAAGGTGGATCTGGGGAAGACGAAGAAGGGGAGAGC
GAATGTGTCGAGGGAGGATGTGGCGATTGTGGCGGATGCGCTGCTGGCGA
GGGATGATGTTGAGGGGTGGCTGGATTTGTTGGAGGGAGAAGAGGATGTG
GAGGTTGCTGTTGAACGGGTTGCGAGGGAGGGTGTAGATGCGGTGGAGGG
AGAGGATGTTGAGGGGATGGTAAGCAGGTTTGGGTTGTAAGCCTATCGTT
ATGATACTTCGTATGATGAA
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Coding sequence (CDS) from alignment at ch5:2145244..2146513-

>KJC3_007324-T1 ID=KJC3_007324-T1|Name=KJC3_007324-T1|organism=Aspergillus niger KJC3|type=CDS|length=1650bp|location=Sequence derived from alignment at ch5:2145244..2146513- (Aspergillus niger KJC3)
GAGCCGGCGGCAAAGGTGGACCCGCACGCACGCACGCCATCGATGAAGTA
GCAGCGAAGCATTTCCTCAGCGCCTCATTCTCACACCCCAGCGTACGTAA
ATTCCTCCTCGTCTCCTGGATCGGCAGCCGACGCAAGCAACCCACCTGGC
TGTCTGACGACGAATGGGCGGGCCTCCAAAACGTCTTCTACAACGTCCTC
CCCGCATATGCCAAGGCCAAGCTGGAAGCGGACGAGTACATGACCGCGTT
GGCGGCGGCGCGCAAGAAGCTTGTTGCTGCGGGGGCGGCGCAGCCGCTGC
AGGCGATTAATCTGCGACCGGGGACGTTGACGGATACGCCTGCGACGAGG
AAGGTGGATCTGGGGAAGACGAAGAAGGGGAGAGCGAATGTGTCGAGGGA
GGATGTGGCGATTGTGGCGGATGCGCTGCTGGCGAGGGATGATGTTGAGG
GGTGGCTGGATTTGTTGGAGGGAGAAGAGGATGTGGAGGTTGCTGTTGAA
CGGGTTGCGAGGGAGGGTGTAGATGCGGTGGAGGGAGAGGATGTTGAGGG
GATGGTAAGCAGGTTTGGGTTGTAAATGCAAGTCCTCCTCCTAGGCGGCC
ACGGCAAAGTGGCTCTGCAACTGACCCCGCTTCTCCTCGCCCGCTCCTGG
AACGTCACCAGCGTCATCCGCAACGCAGAGCACGAGAACGAGATCCTTGC
TTTAGGCAAAGGCGCCAAAGGCAAACTGAGCGTCCTCCTCTCCAGCCTCG
ACGATATCAAAAGCGACGCCGATGCCAAAAATGTCCTCGACCGCGTTTCC
CCAGACTATGTAGTCTGGTCTGCAGGAGCCGGCGGCAAAGGTGGACCCGC
ACGCACGCACGCCATCGATGAAGTAGCAGCGAAGCATTTCCTCAGCGCCT
CATTCTCACACCCCAGCGTACGTAAATTCCTCCTCGTCTCCTGGATCGGC
AGCCGACGCAAGCAACCCACCTGGCTGTCTGACGACGAATGGGCGGGCCT
CCAAAACGTCTTCTACAACGTCCTCCCCGCATATGCCAAGGCCAAGCTGG
AAGCGGACGAGTACATGACCGCGTTGGCGGCGGCGCGCAAGAAGCTTGTT
GCTGCGGGGGCGGCGCAGCCGCTGCAGGCGATTAATCTGCGACCGGGGAC
GTTGACGGATACGCCTGCGACGAGGAAGGTGGATCTGGGGAAGACGAAGA
AGGGGAGAGCGAATGTGTCGAGGGAGGATGTGGCGATTGTGGCGGATGCG
CTGCTGGCGAGGGATGATGTTGAGGGGTGGCTGGATTTGTTGGAGGGAGA
AGAGGATGTGGAGGTTGCTGTTGAACGGGTTGCGAGGGAGGGTGTAGATG
CGGTGGAGGGAGAGGATGTTGAGGGGATGGTAAGCAGGTTTGGGTTGTAA
ATGCAAGTCCTCCTCCTAGGCGGCCACGGCAAAGTGGCTCTGCAACTGAC
CCCGCTTCTCCTCGCCCGCTCCTGGAACGTCACCAGCGTCATCCGCAACG
CAGAGCACGAGAACGAGATCCTTGCTTTAGGCAAAGGCGCCAAAGGCAAA
CTGAGCGTCCTCCTCTCCAGCCTCGACGATATCAAAAGCGACGCCGATGC
CAAAAATGTCCTCGACCGCGTTTCCCCAGACTATGTAGTCTGGTCTGCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007324KJC3_007324Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007324-T1KJC3_007324-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007324-T1.cdsKJC3_007324-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007324-T1.utr3p1KJC3_007324-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007324-T1.exon2KJC3_007324-T1.exon2Aspergillus niger KJC3exon
KJC3_007324-T1.exon1KJC3_007324-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007324-T1.utr5p1KJC3_007324-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2145244..2146513 -
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