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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2161603..2162912+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007329-T1 ID=KJC3_007329-T1|Name=KJC3_007329-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1310bp|location=Sequence derived from alignment at ch5:2161603..2162912+ (Aspergillus niger KJC3)
CGAGCTTGTTTCCTTCCCAGCAACAAACCCCAGAGCATTTCTTTGATACC
CCCAAGCTCAACACACTTTCTTCTTTCATACACCTTCAAAAAAAAAGTTA
CAATCACAATGGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAAC
ACCAAGCGTGACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAA
TGTCAACGTCCTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAG
AGTCCGAGTTTGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAA
GATGCCTGCGACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCA
GACCGTGGCCTACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCC
GCGCGGAGATGACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATC
GACGAGTCCGACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCA
ATCCGCCGAGGCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGA
CCGGTCTCATCCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAG
GGCCAGTGGGATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGA
TGAGCGCATCATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCG
GCCACCCCATCTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGC
CTCGACAACGTCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGT
CGTCAAGGACCAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCT
ACCACTCGTTCTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATG
AACGACCACGACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATA
CGACCTGTACAGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGG
TAAGCCTACCCCATTACTCCGACTTTGGTGAACATAAGACTAACAAATGT
CGAACAGCCATACTACCTCGACCTGATCGACGAATACTTCCCCAACAAGG
TGATCAAGTGGTAGAGCATTGATATGATGTATGATTTTGGCTGGATGATT
ATATGTATTGCTTCTTCTTACCACATTTTTGCTTCTTATTCCCCCTTTAC
CCTCCTAGCATGCACGCAAGCGATGATCTACGACCTACTGCAGTCACTTT
TGAAATCAAAGAATGGGATAGATTCCCTTTTCCTCCTCCAAAAGAGTTCT
TGCCCTTGCT back to topCoding sequence (CDS) from alignment at ch5:2161603..2162912+ >KJC3_007329-T1 ID=KJC3_007329-T1|Name=KJC3_007329-T1|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch5:2161603..2162912+ (Aspergillus niger KJC3)
ATGGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAACACCAAGCG
TGACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAATGTCAACG
TCCTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAGAGTCCGAG
TTTGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAAGATGCCTG
CGACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCAGACCGTGG
CCTACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCCGCGCGGAG
ATGACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATCGACGAGTC
CGACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCAATCCGCCG
AGGCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGACCGGTCTC
ATCCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAGGGCCAGTG
GGATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGATGAGCGCA
TCATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCGGCCACCCC
ATCTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGCCTCGACAA
CGTCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGTCGTCAAGG
ACCAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCTACCACTCG
TTCTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATGAACGACCA
CGACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATACGACCTGT
ACAGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGCCATACTAC
CTCGACCTGATCGACGAATACTTCCCCAACAAGGTGATCAAGTGGTAGAT
GGCACCAGTCGCTGTGTCTCCTGAATCCCCGGTGTTTAACACCAAGCGTG
ACGGACAGGCTCTCGAGGAGCTGTCGGATGCTATTGACAATGTCAACGTC
CTCAAGGACAACATGAAGAAGGAGAAGGGTCTGTACGAAGAGTCCGAGTT
TGACAAGAACAAGGACAAGACCAAGTTCCGTCAGTACGAAGATGCCTGCG
ACCGGGTCAAGAACTTCTACAAGGAACAGCACACCAAGCAGACCGTGGCC
TACAACCTCAAGGCCCGCAACGAGTTCCACTCCAAGACCCGCGCGGAGAT
GACCATCTGGGAGGCGATGGAGAAGCTCAACACCCTCATCGACGAGTCCG
ACCCGGACACCAGCCTCTCTCAGATCGAGCACCTCCTGCAATCCGCCGAG
GCCATTCGCCGCGACGGCAAGCCCCGCTGGATGCAGCTGACCGGTCTCAT
CCACGACCTGGGCAAGCTGCTCTACTTCTTCGACGCCCAGGGCCAGTGGG
ATGTCGTCGGAGACACCTTCCCCGTCGGCTGTGGTTTCGATGAGCGCATC
ATCTACGGCCGTGAGTCCTTCAAGGACAACGAGGACTTCGGCCACCCCAT
CTACGACACCAAGTTCGGAATCTACAGCCCCGGCTGCGGCCTCGACAACG
TCATGCTCTCCTGGGGTCACGACGAATACCTCTACCATGTCGTCAAGGAC
CAGTCCACTCTCCCGGACGAGGCCCTCGCCATGATCCGCTACCACTCGTT
CTACCCCTGGCACAATGCCGGCGCTTACCACGAGCTGATGAACGACCACG
ACAAGGAGATGTTCAAGGCTGTCAAGGCATTCAACCCATACGACCTGTAC
AGCAAGAGCGACGATGTCCCCAGCCCTGAGGAACTCAAGCCATACTACCT
CGACCTGATCGACGAATACTTCCCCAACAAGGTGATCAAGTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050113 | inositol oxygenase activity |
| GO:0005506 | iron ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019310 | inositol catabolic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007329-T1.utr5p1 | KJC3_007329-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007329-T1.utr3p1 | KJC3_007329-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007828 |
| DBxref | PFAM:PF05153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2161603..2162912 + |
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