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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2163604..2165387- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007330-T1 ID=KJC3_007330-T1|Name=KJC3_007330-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1784bp|location=Sequence derived from alignment at ch5:2163604..2165387- (Aspergillus niger KJC3)
CTGATAGTCAACTAACTGCTTAGTGGGTGGGATATCGATGGAGAAGTCAT
GCATCCATCCCCAACTGCATCCCCCTCATGAGGAGGCTGGTCCATTTTAT
CATACTCGATGCCTGGATGCCTGCTATTCTGAATGCTGTGCTGCCTCCAG
GAACCCCTTTTCCGACCGGAATCCGACCCACGGGGCAACCCTGGAGGATG
ATATCCGGGGTCGCAGTGGTCATCTCCACGGGGGTTCCAAACCCTCCAAG
CGCCTTGCCCGGCTATTCCAGGCTGATCTCCTACTAGTCTAGTGGCACAC
TCTGGGATTGTTTCTCCTGCCAACTAAACACCTGAGGAGAAGGTACTTGG
CAGGTCCAGCTTCTCCGCATCCCCTCCGATAGAGCTAGACCGACTCTTGC
TGGAGCTTCTCTCGTGTGGTTAAATTGCACGTCCTCGCTGTTGTCGTTCC
CTCTCACTGTCCTCAATTCTCCTCACATCTTCCACAGACCGTTACACGAA
ACAACCCTTTCTCTAACTCAATTCCTCATCTACCCTCTTCCTCTCCTCCT
GTATCATCACAATGTCTGCCAGAAAGCTGAAGGTTGGCTGTGCCGGTCTG
GGCCGCATGGGCAAGCGTCATGCCCTCAACTTCTTGCAGCGTACTCCCCG
TGCAGACCTTGTCGCCGTCAGCACTCCGGACGACTCGGAACTGGAATGGG
CCAAGGCCAACCTTGCTCCGTACGGAGTCACGGCATACAAGAACTACGAG
GACATGCTGAAGCACGAAGGCCTGGAGGCCGTCGTCGTTGCGTCCGCGAC
CGCCGTGCACGCTGAACAGGCCATTAAGGCCATTGAGGCTGGCAAGAACG
TTCTCTGCGAGAAACCCTTGTCGACCAGTGTCGAGATCGTATGTTTCCAC
CTCCTTGCCCCCCAATGCCTCCCTAGCAATGCAGCTAACATGCCTCTTCA
ATAGTCCCAAACCGTCCTCGACGCAGCAGCCAAGAAGCCCGAACTCAAAG
TAATGTGCGGTTTCTCCCGTCGCTTCGATGCCTCCTACCGTGACGCATTC
AACAAGATGTCCGCTGGTGGAATTGGTGCTCCCGCCGTCATGCGCAGTCA
GACCTGCGACAAGCTGGACCCCACCGGGTTCTTCGTCGCCTACGCCGAGT
TCTCGGGTGGTATCTTCGTGGACTGCTCCATCCACGATATCGACCTGGCT
CTGTGGTTCTTCGGCCAAGACAGCAAGGTCAAGTCTGTGTCCGCGGTGGG
TATCACCGCCGTTGAGCCCGACCTGCGCAAGCATAACGACCGGGACAACG
CCGTCGGATTGGTGGAGTTCCACAACGGCAAGATCGCCTACTTCTACGCC
TCGCGCATGATGGCAGCCGGCCAGGAAGACACCACCGAAATCATCGGCAC
CAAGGGTAAGCTGGCCGTTAACACCCAGCCTGCCCTGAACCTGGTCAACA
TCTTCGACGAGAACGGTGTCCGTCGCGAGATCCCCCAGCACTACTATGAC
CGCTTCGAGTATGCGTTCGTTACTGAGGCGAATGAATTCACGGCCTGCTG
TCTCGAGAACACCCCTGTCCCTCTGAAGCTCGAGGGCGCCGTCCAGGCAG
TCCGCATCGGCGCTGCCCTTCAAGAATCGCTGATCACGGGCGAGAAGATC
TTTTTCGACGAGGCTGGTCAGCGTATTCCCAAGGCAAGACTTTAAAGATA
TGATAGACACGATAGATTCCTGTTATGACTAGTACTTTCCTCATGTTAAT
GAAAAGCGCGATCGCTGTTCTTGTTTAAAGCAAC back to topCoding sequence (CDS) from alignment at ch5:2163604..2165387- >KJC3_007330-T1 ID=KJC3_007330-T1|Name=KJC3_007330-T1|organism=Aspergillus niger KJC3|type=CDS|length=2136bp|location=Sequence derived from alignment at ch5:2163604..2165387- (Aspergillus niger KJC3)
TCCCAAACCGTCCTCGACGCAGCAGCCAAGAAGCCCGAACTCAAAGTAAT
GTGCGGTTTCTCCCGTCGCTTCGATGCCTCCTACCGTGACGCATTCAACA
AGATGTCCGCTGGTGGAATTGGTGCTCCCGCCGTCATGCGCAGTCAGACC
TGCGACAAGCTGGACCCCACCGGGTTCTTCGTCGCCTACGCCGAGTTCTC
GGGTGGTATCTTCGTGGACTGCTCCATCCACGATATCGACCTGGCTCTGT
GGTTCTTCGGCCAAGACAGCAAGGTCAAGTCTGTGTCCGCGGTGGGTATC
ACCGCCGTTGAGCCCGACCTGCGCAAGCATAACGACCGGGACAACGCCGT
CGGATTGGTGGAGTTCCACAACGGCAAGATCGCCTACTTCTACGCCTCGC
GCATGATGGCAGCCGGCCAGGAAGACACCACCGAAATCATCGGCACCAAG
GGTAAGCTGGCCGTTAACACCCAGCCTGCCCTGAACCTGGTCAACATCTT
CGACGAGAACGGTGTCCGTCGCGAGATCCCCCAGCACTACTATGACCGCT
TCGAGTATGCGTTCGTTACTGAGGCGAATGAATTCACGGCCTGCTGTCTC
GAGAACACCCCTGTCCCTCTGAAGCTCGAGGGCGCCGTCCAGGCAGTCCG
CATCGGCGCTGCCCTTCAAGAATCGCTGATCACGGGCGAGAAGATCTTTT
TCGACGAGGCTGGTCAGCGTATTCCCAAGGCAAGACTTTAAATGTCTGCC
AGAAAGCTGAAGGTTGGCTGTGCCGGTCTGGGCCGCATGGGCAAGCGTCA
TGCCCTCAACTTCTTGCAGCGTACTCCCCGTGCAGACCTTGTCGCCGTCA
GCACTCCGGACGACTCGGAACTGGAATGGGCCAAGGCCAACCTTGCTCCG
TACGGAGTCACGGCATACAAGAACTACGAGGACATGCTGAAGCACGAAGG
CCTGGAGGCCGTCGTCGTTGCGTCCGCGACCGCCGTGCACGCTGAACAGG
CCATTAAGGCCATTGAGGCTGGCAAGAACGTTCTCTGCGAGAAACCCTTG
TCGACCAGTGTCGAGATCTCCCAAACCGTCCTCGACGCAGCAGCCAAGAA
GCCCGAACTCAAAGTAATGTGCGGTTTCTCCCGTCGCTTCGATGCCTCCT
ACCGTGACGCATTCAACAAGATGTCCGCTGGTGGAATTGGTGCTCCCGCC
GTCATGCGCAGTCAGACCTGCGACAAGCTGGACCCCACCGGGTTCTTCGT
CGCCTACGCCGAGTTCTCGGGTGGTATCTTCGTGGACTGCTCCATCCACG
ATATCGACCTGGCTCTGTGGTTCTTCGGCCAAGACAGCAAGGTCAAGTCT
GTGTCCGCGGTGGGTATCACCGCCGTTGAGCCCGACCTGCGCAAGCATAA
CGACCGGGACAACGCCGTCGGATTGGTGGAGTTCCACAACGGCAAGATCG
CCTACTTCTACGCCTCGCGCATGATGGCAGCCGGCCAGGAAGACACCACC
GAAATCATCGGCACCAAGGGTAAGCTGGCCGTTAACACCCAGCCTGCCCT
GAACCTGGTCAACATCTTCGACGAGAACGGTGTCCGTCGCGAGATCCCCC
AGCACTACTATGACCGCTTCGAGTATGCGTTCGTTACTGAGGCGAATGAA
TTCACGGCCTGCTGTCTCGAGAACACCCCTGTCCCTCTGAAGCTCGAGGG
CGCCGTCCAGGCAGTCCGCATCGGCGCTGCCCTTCAAGAATCGCTGATCA
CGGGCGAGAAGATCTTTTTCGACGAGGCTGGTCAGCGTATTCCCAAGGCA
AGACTTTAAATGTCTGCCAGAAAGCTGAAGGTTGGCTGTGCCGGTCTGGG
CCGCATGGGCAAGCGTCATGCCCTCAACTTCTTGCAGCGTACTCCCCGTG
CAGACCTTGTCGCCGTCAGCACTCCGGACGACTCGGAACTGGAATGGGCC
AAGGCCAACCTTGCTCCGTACGGAGTCACGGCATACAAGAACTACGAGGA
CATGCTGAAGCACGAAGGCCTGGAGGCCGTCGTCGTTGCGTCCGCGACCG
CCGTGCACGCTGAACAGGCCATTAAGGCCATTGAGGCTGGCAAGAACGTT
CTCTGCGAGAAACCCTTGTCGACCAGTGTCGAGATC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007330-T1.utr3p1 | KJC3_007330-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007330-T1.utr5p1 | KJC3_007330-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR000683 |
| DBxref | InterPro:IPR004104 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2163604..2165387 - |
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