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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2166229..2168295- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007332-T1 ID=KJC3_007332-T1|Name=KJC3_007332-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2067bp|location=Sequence derived from alignment at ch5:2166229..2168295- (Aspergillus niger KJC3)
CCTTGCTTTCTGTCTTTCCATCCCCTGTTTCTCATGATGTGAGCTTAGTC
CATCGTTGAGACCCACGCGTATGACCCGTTAGAATCTACCGCACCATGGC
GTCCGACTCCACGCCTAACCCCGACCTCCATCCGGTGGTTCGCAACGCTC
TCCGCATTTCCCTCAGCGCCAAGGAGTACAAGCTGCTCCACGATTATGCC
GTTCAGCGCACTCCCTCCGCCATCCAGAACAAGCTTCCCTCGCCTTCAGC
TTTCGAGGCTATAGTTCGGTCTAAAAACAAGCATAATGAAGCTTCCATTC
GAGCCTCGTTACGCGTGTTCGTTTTGTCCAGCTCCCTGTTGAAGCTCGTT
GACGTCGTGGCTGGGAGGATCCGCGGTGACCTAACCCAGTAAGCTCTCTC
TTCTTTATACGCTTATTGTAGACCATCAGAGGTATGAGGGGACGGTTCAT
GTACGTGGCTGATCTCCAATATCTTTTACAGAAAGAATACATCGCGCACC
TCTTTTGCGCGCTCCCCAAACTTTCGCCTCTCCATCTCCCTGTCGCTTCT
TCTTCTCATCCACCGCTTCCTCTATCGCTTCTTCGTCAAGTTGCGTGCCA
ACCTTCGTACAGACGATGCTCGACCTTTCCGGGACCGCAACCCACGGATT
TCCAGAGCACTCACGTCTCGCTTTGCGCCCGCAGTCGGTGCCAGTATTGC
GGGGCTTGCATTGGGAATATGTCCACAGAAGCAATTGCGGCTGACGGCAG
CAATCTACACAGCTACTCGTAGCTTGGAGTTTCTGTTTAATGCGCTGGAT
GAGAAGGGATGGTTCAAGGATCGACCTCGATGGTTCGGAAGCTGGCTGTT
AATGCCAATTGCATGCGCACAACTCTTTCATGCCTTCATTTTTGATCGCG
AGACTGCACCCAAGGTTCGTTGATATTGTTTGACACCGAGACTCTTCATA
CGCTGATTTGTACGAAAAGTGGTTTGGAAATGTTATCCTGAGGCTCTCTC
CGAGCTACGTGCGCGGCCGTCCCGAGTCCTTGCCCCTGGAGATACCATGG
CCAGAGAAGGAAGATGTGGTTGATTCCTTGGCCAACATCGCCAACCTACG
GTGGCCGTAAGTACTAGCACCTACTTTAACATCAGACCTTCCCAACTAAT
GCATCTACCAGGGCATTTGCCTCCCCTATCTTACACCCAGGAAGCCCAAA
CACGCTACCGTCTACACTAACATCTATCTCCCCTATCACCGGCCCTGCCC
ATCCAGCAATCTCCAGTCTCTCGTGTGCCTTACTCCACCCAAACAGCCCC
AGCTGCAGTACCGCTTTTCTGCACCACATCCTCCTCTTGGTTCCACCGCT
CGCTCGCTTCCTTACCACCGTCACTCTAGCCCTATCTCTACGCAACATTA
AGGCCCTCATGAACGAGCCTATCAGTTCCATCAACAAACTCTCCAAGAAA
ATCATCACCATGACCGCCATCCTCTCTGCGTCTACTGGTTCCGCATGGGG
TAGCATCTGTCTCTGGAACACCCTTCTCCCACGCTCTGTGCTTCCCGCTA
AACGGTTCTTCCTTAGTGGCGCGCTCGCAGGCGTTCCATTTGCTTTCCTC
ACAAACAGCCGCGGTATCTTCATGTACTTCTTCCGAGCAGCTGTGGACTC
GGCCTGGAAGACCGGCGTCAAGCGCGGATTATGGAAGGGCTGGAAGGGCG
GAGACCTATGCATCATTGTGCTGGCGTGGGCACTCATTGGGTCTATTCTT
GAGACGAGACCGTCCGCTGTGCAGGGGAAGGGTGTGCGGAAGGCACTGGC
GTGGTTGAAGGGGGATGGCTTTGCAGATCCAGTTGAGGTGGCGGCGAAGA
GGAGGGCGAGGAAAGCAGCAGCGTTGAAGGCGGAAAAAGCGGAGAATGAG
CCTTGAATCCAGTATATTGTCAACAAGTCTTATAGTTCCGGTGCATTGTT
TCAATTCATGTTCATAGGTTCTTTTTATGCAAAGCGAGGGGTGGAGTGTA
ACTATTTGTCGCGTGATTGATGCAAATGCCAGAAAGACACCCAACAGTGA
TCCTAATAATACCGGCC back to topCoding sequence (CDS) from alignment at ch5:2166229..2168295- >KJC3_007332-T1 ID=KJC3_007332-T1|Name=KJC3_007332-T1|organism=Aspergillus niger KJC3|type=CDS|length=6432bp|location=Sequence derived from alignment at ch5:2166229..2168295- (Aspergillus niger KJC3)
GGCATTTGCCTCCCCTATCTTACACCCAGGAAGCCCAAACACGCTACCGT
CTACACTAACATCTATCTCCCCTATCACCGGCCCTGCCCATCCAGCAATC
TCCAGTCTCTCGTGTGCCTTACTCCACCCAAACAGCCCCAGCTGCAGTAC
CGCTTTTCTGCACCACATCCTCCTCTTGGTTCCACCGCTCGCTCGCTTCC
TTACCACCGTCACTCTAGCCCTATCTCTACGCAACATTAAGGCCCTCATG
AACGAGCCTATCAGTTCCATCAACAAACTCTCCAAGAAAATCATCACCAT
GACCGCCATCCTCTCTGCGTCTACTGGTTCCGCATGGGGTAGCATCTGTC
TCTGGAACACCCTTCTCCCACGCTCTGTGCTTCCCGCTAAACGGTTCTTC
CTTAGTGGCGCGCTCGCAGGCGTTCCATTTGCTTTCCTCACAAACAGCCG
CGGTATCTTCATGTACTTCTTCCGAGCAGCTGTGGACTCGGCCTGGAAGA
CCGGCGTCAAGCGCGGATTATGGAAGGGCTGGAAGGGCGGAGACCTATGC
ATCATTGTGCTGGCGTGGGCACTCATTGGGTCTATTCTTGAGACGAGACC
GTCCGCTGTGCAGGGGAAGGGTGTGCGGAAGGCACTGGCGTGGTTGAAGG
GGGATGGCTTTGCAGATCCAGTTGAGGTGGCGGCGAAGAGGAGGGCGAGG
AAAGCAGCAGCGTTGAAGGCGGAAAAAGCGGAGAATGAGCCTTGATGGTT
TGGAAATGTTATCCTGAGGCTCTCTCCGAGCTACGTGCGCGGCCGTCCCG
AGTCCTTGCCCCTGGAGATACCATGGCCAGAGAAGGAAGATGTGGTTGAT
TCCTTGGCCAACATCGCCAACCTACGGTGGCCAAAGAATACATCGCGCAC
CTCTTTTGCGCGCTCCCCAAACTTTCGCCTCTCCATCTCCCTGTCGCTTC
TTCTTCTCATCCACCGCTTCCTCTATCGCTTCTTCGTCAAGTTGCGTGCC
AACCTTCGTACAGACGATGCTCGACCTTTCCGGGACCGCAACCCACGGAT
TTCCAGAGCACTCACGTCTCGCTTTGCGCCCGCAGTCGGTGCCAGTATTG
CGGGGCTTGCATTGGGAATATGTCCACAGAAGCAATTGCGGCTGACGGCA
GCAATCTACACAGCTACTCGTAGCTTGGAGTTTCTGTTTAATGCGCTGGA
TGAGAAGGGATGGTTCAAGGATCGACCTCGATGGTTCGGAAGCTGGCTGT
TAATGCCAATTGCATGCGCACAACTCTTTCATGCCTTCATTTTTGATCGC
GAGACTGCACCCAAGATGGCGTCCGACTCCACGCCTAACCCCGACCTCCA
TCCGGTGGTTCGCAACGCTCTCCGCATTTCCCTCAGCGCCAAGGAGTACA
AGCTGCTCCACGATTATGCCGTTCAGCGCACTCCCTCCGCCATCCAGAAC
AAGCTTCCCTCGCCTTCAGCTTTCGAGGCTATAGTTCGGTCTAAAAACAA
GCATAATGAAGCTTCCATTCGAGCCTCGTTACGCGTGTTCGTTTTGTCCA
GCTCCCTGTTGAAGCTCGTTGACGTCGTGGCTGGGAGGATCCGCGGTGAC
CTAACCCAGGCATTTGCCTCCCCTATCTTACACCCAGGAAGCCCAAACAC
GCTACCGTCTACACTAACATCTATCTCCCCTATCACCGGCCCTGCCCATC
CAGCAATCTCCAGTCTCTCGTGTGCCTTACTCCACCCAAACAGCCCCAGC
TGCAGTACCGCTTTTCTGCACCACATCCTCCTCTTGGTTCCACCGCTCGC
TCGCTTCCTTACCACCGTCACTCTAGCCCTATCTCTACGCAACATTAAGG
CCCTCATGAACGAGCCTATCAGTTCCATCAACAAACTCTCCAAGAAAATC
ATCACCATGACCGCCATCCTCTCTGCGTCTACTGGTTCCGCATGGGGTAG
CATCTGTCTCTGGAACACCCTTCTCCCACGCTCTGTGCTTCCCGCTAAAC
GGTTCTTCCTTAGTGGCGCGCTCGCAGGCGTTCCATTTGCTTTCCTCACA
AACAGCCGCGGTATCTTCATGTACTTCTTCCGAGCAGCTGTGGACTCGGC
CTGGAAGACCGGCGTCAAGCGCGGATTATGGAAGGGCTGGAAGGGCGGAG
ACCTATGCATCATTGTGCTGGCGTGGGCACTCATTGGGTCTATTCTTGAG
ACGAGACCGTCCGCTGTGCAGGGGAAGGGTGTGCGGAAGGCACTGGCGTG
GTTGAAGGGGGATGGCTTTGCAGATCCAGTTGAGGTGGCGGCGAAGAGGA
GGGCGAGGAAAGCAGCAGCGTTGAAGGCGGAAAAAGCGGAGAATGAGCCT
TGATGGTTTGGAAATGTTATCCTGAGGCTCTCTCCGAGCTACGTGCGCGG
CCGTCCCGAGTCCTTGCCCCTGGAGATACCATGGCCAGAGAAGGAAGATG
TGGTTGATTCCTTGGCCAACATCGCCAACCTACGGTGGCCAAAGAATACA
TCGCGCACCTCTTTTGCGCGCTCCCCAAACTTTCGCCTCTCCATCTCCCT
GTCGCTTCTTCTTCTCATCCACCGCTTCCTCTATCGCTTCTTCGTCAAGT
TGCGTGCCAACCTTCGTACAGACGATGCTCGACCTTTCCGGGACCGCAAC
CCACGGATTTCCAGAGCACTCACGTCTCGCTTTGCGCCCGCAGTCGGTGC
CAGTATTGCGGGGCTTGCATTGGGAATATGTCCACAGAAGCAATTGCGGC
TGACGGCAGCAATCTACACAGCTACTCGTAGCTTGGAGTTTCTGTTTAAT
GCGCTGGATGAGAAGGGATGGTTCAAGGATCGACCTCGATGGTTCGGAAG
CTGGCTGTTAATGCCAATTGCATGCGCACAACTCTTTCATGCCTTCATTT
TTGATCGCGAGACTGCACCCAAGATGGCGTCCGACTCCACGCCTAACCCC
GACCTCCATCCGGTGGTTCGCAACGCTCTCCGCATTTCCCTCAGCGCCAA
GGAGTACAAGCTGCTCCACGATTATGCCGTTCAGCGCACTCCCTCCGCCA
TCCAGAACAAGCTTCCCTCGCCTTCAGCTTTCGAGGCTATAGTTCGGTCT
AAAAACAAGCATAATGAAGCTTCCATTCGAGCCTCGTTACGCGTGTTCGT
TTTGTCCAGCTCCCTGTTGAAGCTCGTTGACGTCGTGGCTGGGAGGATCC
GCGGTGACCTAACCCAGGCATTTGCCTCCCCTATCTTACACCCAGGAAGC
CCAAACACGCTACCGTCTACACTAACATCTATCTCCCCTATCACCGGCCC
TGCCCATCCAGCAATCTCCAGTCTCTCGTGTGCCTTACTCCACCCAAACA
GCCCCAGCTGCAGTACCGCTTTTCTGCACCACATCCTCCTCTTGGTTCCA
CCGCTCGCTCGCTTCCTTACCACCGTCACTCTAGCCCTATCTCTACGCAA
CATTAAGGCCCTCATGAACGAGCCTATCAGTTCCATCAACAAACTCTCCA
AGAAAATCATCACCATGACCGCCATCCTCTCTGCGTCTACTGGTTCCGCA
TGGGGTAGCATCTGTCTCTGGAACACCCTTCTCCCACGCTCTGTGCTTCC
CGCTAAACGGTTCTTCCTTAGTGGCGCGCTCGCAGGCGTTCCATTTGCTT
TCCTCACAAACAGCCGCGGTATCTTCATGTACTTCTTCCGAGCAGCTGTG
GACTCGGCCTGGAAGACCGGCGTCAAGCGCGGATTATGGAAGGGCTGGAA
GGGCGGAGACCTATGCATCATTGTGCTGGCGTGGGCACTCATTGGGTCTA
TTCTTGAGACGAGACCGTCCGCTGTGCAGGGGAAGGGTGTGCGGAAGGCA
CTGGCGTGGTTGAAGGGGGATGGCTTTGCAGATCCAGTTGAGGTGGCGGC
GAAGAGGAGGGCGAGGAAAGCAGCAGCGTTGAAGGCGGAAAAAGCGGAGA
ATGAGCCTTGATGGTTTGGAAATGTTATCCTGAGGCTCTCTCCGAGCTAC
GTGCGCGGCCGTCCCGAGTCCTTGCCCCTGGAGATACCATGGCCAGAGAA
GGAAGATGTGGTTGATTCCTTGGCCAACATCGCCAACCTACGGTGGCCAA
AGAATACATCGCGCACCTCTTTTGCGCGCTCCCCAAACTTTCGCCTCTCC
ATCTCCCTGTCGCTTCTTCTTCTCATCCACCGCTTCCTCTATCGCTTCTT
CGTCAAGTTGCGTGCCAACCTTCGTACAGACGATGCTCGACCTTTCCGGG
ACCGCAACCCACGGATTTCCAGAGCACTCACGTCTCGCTTTGCGCCCGCA
GTCGGTGCCAGTATTGCGGGGCTTGCATTGGGAATATGTCCACAGAAGCA
ATTGCGGCTGACGGCAGCAATCTACACAGCTACTCGTAGCTTGGAGTTTC
TGTTTAATGCGCTGGATGAGAAGGGATGGTTCAAGGATCGACCTCGATGG
TTCGGAAGCTGGCTGTTAATGCCAATTGCATGCGCACAACTCTTTCATGC
CTTCATTTTTGATCGCGAGACTGCACCCAAGATGGCGTCCGACTCCACGC
CTAACCCCGACCTCCATCCGGTGGTTCGCAACGCTCTCCGCATTTCCCTC
AGCGCCAAGGAGTACAAGCTGCTCCACGATTATGCCGTTCAGCGCACTCC
CTCCGCCATCCAGAACAAGCTTCCCTCGCCTTCAGCTTTCGAGGCTATAG
TTCGGTCTAAAAACAAGCATAATGAAGCTTCCATTCGAGCCTCGTTACGC
GTGTTCGTTTTGTCCAGCTCCCTGTTGAAGCTCGTTGACGTCGTGGCTGG
GAGGATCCGCGGTGACCTAACCCAGGCATTTGCCTCCCCTATCTTACACC
CAGGAAGCCCAAACACGCTACCGTCTACACTAACATCTATCTCCCCTATC
ACCGGCCCTGCCCATCCAGCAATCTCCAGTCTCTCGTGTGCCTTACTCCA
CCCAAACAGCCCCAGCTGCAGTACCGCTTTTCTGCACCACATCCTCCTCT
TGGTTCCACCGCTCGCTCGCTTCCTTACCACCGTCACTCTAGCCCTATCT
CTACGCAACATTAAGGCCCTCATGAACGAGCCTATCAGTTCCATCAACAA
ACTCTCCAAGAAAATCATCACCATGACCGCCATCCTCTCTGCGTCTACTG
GTTCCGCATGGGGTAGCATCTGTCTCTGGAACACCCTTCTCCCACGCTCT
GTGCTTCCCGCTAAACGGTTCTTCCTTAGTGGCGCGCTCGCAGGCGTTCC
ATTTGCTTTCCTCACAAACAGCCGCGGTATCTTCATGTACTTCTTCCGAG
CAGCTGTGGACTCGGCCTGGAAGACCGGCGTCAAGCGCGGATTATGGAAG
GGCTGGAAGGGCGGAGACCTATGCATCATTGTGCTGGCGTGGGCACTCAT
TGGGTCTATTCTTGAGACGAGACCGTCCGCTGTGCAGGGGAAGGGTGTGC
GGAAGGCACTGGCGTGGTTGAAGGGGGATGGCTTTGCAGATCCAGTTGAG
GTGGCGGCGAAGAGGAGGGCGAGGAAAGCAGCAGCGTTGAAGGCGGAAAA
AGCGGAGAATGAGCCTTGATGGTTTGGAAATGTTATCCTGAGGCTCTCTC
CGAGCTACGTGCGCGGCCGTCCCGAGTCCTTGCCCCTGGAGATACCATGG
CCAGAGAAGGAAGATGTGGTTGATTCCTTGGCCAACATCGCCAACCTACG
GTGGCCAAAGAATACATCGCGCACCTCTTTTGCGCGCTCCCCAAACTTTC
GCCTCTCCATCTCCCTGTCGCTTCTTCTTCTCATCCACCGCTTCCTCTAT
CGCTTCTTCGTCAAGTTGCGTGCCAACCTTCGTACAGACGATGCTCGACC
TTTCCGGGACCGCAACCCACGGATTTCCAGAGCACTCACGTCTCGCTTTG
CGCCCGCAGTCGGTGCCAGTATTGCGGGGCTTGCATTGGGAATATGTCCA
CAGAAGCAATTGCGGCTGACGGCAGCAATCTACACAGCTACTCGTAGCTT
GGAGTTTCTGTTTAATGCGCTGGATGAGAAGGGATGGTTCAAGGATCGAC
CTCGATGGTTCGGAAGCTGGCTGTTAATGCCAATTGCATGCGCACAACTC
TTTCATGCCTTCATTTTTGATCGCGAGACTGCACCCAAGATGGCGTCCGA
CTCCACGCCTAACCCCGACCTCCATCCGGTGGTTCGCAACGCTCTCCGCA
TTTCCCTCAGCGCCAAGGAGTACAAGCTGCTCCACGATTATGCCGTTCAG
CGCACTCCCTCCGCCATCCAGAACAAGCTTCCCTCGCCTTCAGCTTTCGA
GGCTATAGTTCGGTCTAAAAACAAGCATAATGAAGCTTCCATTCGAGCCT
CGTTACGCGTGTTCGTTTTGTCCAGCTCCCTGTTGAAGCTCGTTGACGTC
GTGGCTGGGAGGATCCGCGGTGACCTAACCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007332-T1.utr3p1 | KJC3_007332-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007332-T1.utr5p1 | KJC3_007332-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2166229..2168295 - |
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