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KJC3_007335-T1, KJC3_007335-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007335-T1
Unique NameKJC3_007335-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2179215..2180814+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007335-T1 ID=KJC3_007335-T1|Name=KJC3_007335-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1600bp|location=Sequence derived from alignment at ch5:2179215..2180814+ (Aspergillus niger KJC3)
CAAAACACCACATTGCCCAATGTCCGCCATGGCAACAGCCAGGCTATCTC
CGACAGCAAACTTGCTGCGGAAGTCTCGCCTTTTCGCCCTTCCGCAGGCT
CTGACGCCACCCCAGACTCCGCCAACCTCGAAAAGTGTCAACGAATCCGA
GACCGCAACCCTTCCTCATCCTATCCGAGCGTCCATTGTCACACCGTCGT
CTTCTCTTTCCAGGGGTGACTGGGGTTTGAAGAGGCCTCTTCCCGCCAAA
TCGACGTCCGAAAAATCTTCCAGGCCCGTGGTCAGAATCAATGCACTCGA
TACCTTCGAACACATCACGGACTTCGAGTCCGCGGCCGATCATACGGTGA
CCCTAGAGAAATTCCAGGAGCTTAACATGCCGGTTTCGCTCCCCGCAAGA
GTCACGTACGGAACCAGCATCATTCCCAGACACCAGAGTCCCTTCGAATC
GCATGTCGACAACACACATACTAGCGAAGGCCTGAAGGAGCCCGGCGCGA
GACAATTCAGGCATTCTGGGCCCTGGCTTGCCGGGCAGACGGAGGCCGAG
TTCCAGGCATATTTGAAGAAGGTCCGGAAGAACAAGCCAGAGATCCTACA
GAAGCTTCGTGAATACTTCGTCGCCAAGCGCGAAGCCGAGCAAAGGAAGC
AAGCTCAAGATAACGGCCAGGATCTGGCAACTCTCCGACCTGTCCAGATC
ACCGACGAAGAATTCCAGGGCTACCTGAAGAAACTCCGCACAGATCCGTT
CTCACTAGGCCCTGTCGTCTTCGAGCTTCTGGATCTGCCGTCTCCTCCGG
CTGTACCGAGCAGCCGACTCAACAACCCATACTACCAGTCCCCCGGCAGC
AAGCTTTCTTCCGCGGAGTATGTCGCATCCGGACCACCAAGGACGCACCC
CTCGGCTGGTCTGTCTTACACAAGATCACACGCTTTGATCTACAATCACC
CCAAGTATGGACCTCAGGCCCACCAACGCCCAGTGGAGGCACGTATCTTG
CGCCCCAGAGGACGGAAGGGCAAGAACACGAAGGCCATTGCAGGTGTGGC
TGGTATTGCCGTGGAAGACTTGAATACTGTCACCTTTACCGAGCAGGACT
CTCCGGCCGGCCTTGCCTACTTTGACGCCTCTATCCCCGGTGGTGCTAAG
TACTGGGCCACCCCTATCCGGGCCTTTGTCGACTCGGAAGGCAAGATTGG
CCTGGCTTCTTACCGCGCTAGCGCTACTGCTAAAGCCCCTTACGGAATCG
ATAGCCAGAAGAAGCCCGGATCGTACAGCATCTCTGACGTGGCTCGCGGC
GACCAGCGCGTGGTCCCGAGACTGGATAGACAGCGGAACGCCGCAGCGGA
GACTGAGGAGGTTGCGCGTAACCTCATGAAGAGCCTTGGCTCCTAGAATA
CAGGTGTTTCAGTCCCAAGCAATTTTTGTCTCATGTGTCAGACATGTTCT
ATCTTCCACTTAGAGAGCTTTGCTGTATGATTAGGTTTTTGGATGGTAAA
TGTATAGTTATTTTCGCACTTGTTCTCATTTGTTTGTGATATAAGCCGGC
TACATCTCATTCTAAGTATAAATTAAATTGCAATTTCAAAGACGTCTCAG
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Coding sequence (CDS) from alignment at ch5:2179215..2180814+

>KJC3_007335-T1 ID=KJC3_007335-T1|Name=KJC3_007335-T1|organism=Aspergillus niger KJC3|type=CDS|length=1377bp|location=Sequence derived from alignment at ch5:2179215..2180814+ (Aspergillus niger KJC3)
ATGTCCGCCATGGCAACAGCCAGGCTATCTCCGACAGCAAACTTGCTGCG
GAAGTCTCGCCTTTTCGCCCTTCCGCAGGCTCTGACGCCACCCCAGACTC
CGCCAACCTCGAAAAGTGTCAACGAATCCGAGACCGCAACCCTTCCTCAT
CCTATCCGAGCGTCCATTGTCACACCGTCGTCTTCTCTTTCCAGGGGTGA
CTGGGGTTTGAAGAGGCCTCTTCCCGCCAAATCGACGTCCGAAAAATCTT
CCAGGCCCGTGGTCAGAATCAATGCACTCGATACCTTCGAACACATCACG
GACTTCGAGTCCGCGGCCGATCATACGGTGACCCTAGAGAAATTCCAGGA
GCTTAACATGCCGGTTTCGCTCCCCGCAAGAGTCACGTACGGAACCAGCA
TCATTCCCAGACACCAGAGTCCCTTCGAATCGCATGTCGACAACACACAT
ACTAGCGAAGGCCTGAAGGAGCCCGGCGCGAGACAATTCAGGCATTCTGG
GCCCTGGCTTGCCGGGCAGACGGAGGCCGAGTTCCAGGCATATTTGAAGA
AGGTCCGGAAGAACAAGCCAGAGATCCTACAGAAGCTTCGTGAATACTTC
GTCGCCAAGCGCGAAGCCGAGCAAAGGAAGCAAGCTCAAGATAACGGCCA
GGATCTGGCAACTCTCCGACCTGTCCAGATCACCGACGAAGAATTCCAGG
GCTACCTGAAGAAACTCCGCACAGATCCGTTCTCACTAGGCCCTGTCGTC
TTCGAGCTTCTGGATCTGCCGTCTCCTCCGGCTGTACCGAGCAGCCGACT
CAACAACCCATACTACCAGTCCCCCGGCAGCAAGCTTTCTTCCGCGGAGT
ATGTCGCATCCGGACCACCAAGGACGCACCCCTCGGCTGGTCTGTCTTAC
ACAAGATCACACGCTTTGATCTACAATCACCCCAAGTATGGACCTCAGGC
CCACCAACGCCCAGTGGAGGCACGTATCTTGCGCCCCAGAGGACGGAAGG
GCAAGAACACGAAGGCCATTGCAGGTGTGGCTGGTATTGCCGTGGAAGAC
TTGAATACTGTCACCTTTACCGAGCAGGACTCTCCGGCCGGCCTTGCCTA
CTTTGACGCCTCTATCCCCGGTGGTGCTAAGTACTGGGCCACCCCTATCC
GGGCCTTTGTCGACTCGGAAGGCAAGATTGGCCTGGCTTCTTACCGCGCT
AGCGCTACTGCTAAAGCCCCTTACGGAATCGATAGCCAGAAGAAGCCCGG
ATCGTACAGCATCTCTGACGTGGCTCGCGGCGACCAGCGCGTGGTCCCGA
GACTGGATAGACAGCGGAACGCCGCAGCGGAGACTGAGGAGGTTGCGCGT
AACCTCATGAAGAGCCTTGGCTCCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007335KJC3_007335Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007335-T1.utr5p1KJC3_007335-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007335-T1.exon1KJC3_007335-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007335-T1.cdsKJC3_007335-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007335-T1.utr3p1KJC3_007335-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007335-T1KJC3_007335-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016712
DBxrefPFAM:PF11709
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2179215..2180814 +
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