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KJC3_007337-T1, KJC3_007337-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007337-T1
Unique NameKJC3_007337-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2181884..2183426-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007337-T1 ID=KJC3_007337-T1|Name=KJC3_007337-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1543bp|location=Sequence derived from alignment at ch5:2181884..2183426- (Aspergillus niger KJC3)
ATTTCCCCTCCCCTTAATCAATCCTGCATGCACCATCACGTATAGTTGTT
GGACCTGCCTTTCCCTACATAAAGACCCTTCCTTGTTACTATCCGTAGCT
GCCGTCTTGAATCCGGGGTTTTTGCCTCCTGCCGACCCGAACAACCTTGG
AACTCTGTCTCATCCATCCAACCTTCCATCCATTTCACCACTACTTTTCC
TCCACCAACAAGTGACGCAGATTTGATATTTATCCCGCCTTTTGACCTGT
TCCCTCGGGAATATTCGCTGGAATGTCCTCTGGACGGCCTAATCCAATTT
TGAAGACCTCTCTTCCTTCGATCCACGCAGCGACCGCTGCGTCTGGCCCC
TCCAATTCCGCCCCAAACCATCGGGCGTCACCCTCTAACCCCCTTCAAAT
GTCTCAACAACAACAACCACTACCTAGCTCAATTGCAAACCGGACAGATG
TCGATCCGCGCCATTTAGCTATTGCCTTACATCATGCGAATCAAATCCAG
GCCCAGAAGGACACGGAGGTCCTGATTCTCGACCGCATTCTGAGACTGGT
TGAACTTCCGTCCTCCCGTTCAGCAGATCCTGCGTCACCCTCCCCCGACG
ATGTTCGGGTATTCAAATCCGCCTTAGTCCCCTTTCAACCCGCCGACTAT
GACAACTTGATTGAGGAGAGGAATATCGAGGGTCTCTGTGGCTACGGGCT
ATGTCCTCGAGAGCGCCGCAAGGAAGATGGCAGAGGCTCTTTTCGCATAA
CATGGGGTGCGAAGGGAAGTGGGCGGGGTGGCCGCGGGCGCGAAATGGAC
ATCGTTCCGAAAGAGAAGCTCGAGATGTGGTGTTCGAATGAGTGCGCCGA
AAGAGCCATGTACATACGAGTACAGCTGGCTGAAGAACCAGTGTGGGAGC
GAAGGGCCGACGATGCGCGTGGCAAACATCTTGTCCTGCTGGAAGAGGCC
AGGGCGAAAGAAGGCAAGGGCAAAATGAGAGACCCCGTCTCTATCCGCGA
CGTTGCTGGCCAGCTGGACAGCATGCACCTGGAGAAACTACAAGGTCCTG
GCGATATGGCAGATGATATTGCACGGCTCTCTGTTCGAGACGAGACTCGT
TCACGAGAACTGGCCATGGAACGAGGAGATGTGCATCCTGCCCTCTATAC
TGGCAGAGTGAATATTCGAGTCCAAGAGAACGATAACCCCCGCGGACCAG
CTAGAGCACCGCAGATGCGTCCTGGAGACGAGAAGGGAGGTTCCATCGAA
GGATATGTCCCTCATGAGAACTAAGATGCTTTCGCGCATGGCATTATGAG
GCGTTTTGAACAAAGGTTGATACCCCGATAAGATAGCATGTCAGATAAGA
ACCAAATCAATGGCTTACCACTGTCAAGTCTACGATCGACTCTCCGTAGT
CCGGCATGTCATCAACAGACAGCCGTCCCCGTAGAATCTCCTACGAGAAT
CCAGTCGCAAGACCAGACGAGGGAATAAAATTGGCAATCAAGCATCATCC
CCATCAGGGGAATCAGCGACACCTTGTTTGACAGAATTCGTGT
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Coding sequence (CDS) from alignment at ch5:2181884..2183426-

>KJC3_007337-T1 ID=KJC3_007337-T1|Name=KJC3_007337-T1|organism=Aspergillus niger KJC3|type=CDS|length=1002bp|location=Sequence derived from alignment at ch5:2181884..2183426- (Aspergillus niger KJC3)
ATGTCCTCTGGACGGCCTAATCCAATTTTGAAGACCTCTCTTCCTTCGAT
CCACGCAGCGACCGCTGCGTCTGGCCCCTCCAATTCCGCCCCAAACCATC
GGGCGTCACCCTCTAACCCCCTTCAAATGTCTCAACAACAACAACCACTA
CCTAGCTCAATTGCAAACCGGACAGATGTCGATCCGCGCCATTTAGCTAT
TGCCTTACATCATGCGAATCAAATCCAGGCCCAGAAGGACACGGAGGTCC
TGATTCTCGACCGCATTCTGAGACTGGTTGAACTTCCGTCCTCCCGTTCA
GCAGATCCTGCGTCACCCTCCCCCGACGATGTTCGGGTATTCAAATCCGC
CTTAGTCCCCTTTCAACCCGCCGACTATGACAACTTGATTGAGGAGAGGA
ATATCGAGGGTCTCTGTGGCTACGGGCTATGTCCTCGAGAGCGCCGCAAG
GAAGATGGCAGAGGCTCTTTTCGCATAACATGGGGTGCGAAGGGAAGTGG
GCGGGGTGGCCGCGGGCGCGAAATGGACATCGTTCCGAAAGAGAAGCTCG
AGATGTGGTGTTCGAATGAGTGCGCCGAAAGAGCCATGTACATACGAGTA
CAGCTGGCTGAAGAACCAGTGTGGGAGCGAAGGGCCGACGATGCGCGTGG
CAAACATCTTGTCCTGCTGGAAGAGGCCAGGGCGAAAGAAGGCAAGGGCA
AAATGAGAGACCCCGTCTCTATCCGCGACGTTGCTGGCCAGCTGGACAGC
ATGCACCTGGAGAAACTACAAGGTCCTGGCGATATGGCAGATGATATTGC
ACGGCTCTCTGTTCGAGACGAGACTCGTTCACGAGAACTGGCCATGGAAC
GAGGAGATGTGCATCCTGCCCTCTATACTGGCAGAGTGAATATTCGAGTC
CAAGAGAACGATAACCCCCGCGGACCAGCTAGAGCACCGCAGATGCGTCC
TGGAGACGAGAAGGGAGGTTCCATCGAAGGATATGTCCCTCATGAGAACT
AA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007337KJC3_007337Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007337-T1KJC3_007337-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007337-T1.cdsKJC3_007337-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007337-T1.utr3p2KJC3_007337-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_007337-T1.utr3p1KJC3_007337-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007337-T1.exon2KJC3_007337-T1.exon2Aspergillus niger KJC3exon
KJC3_007337-T1.exon1KJC3_007337-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007337-T1.utr5p1KJC3_007337-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR038534
DBxrefInterPro:IPR007308
DBxrefPFAM:PF04181
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2181884..2183426 -
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