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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2188373..2189826+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007339-T1 ID=KJC3_007339-T1|Name=KJC3_007339-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1454bp|location=Sequence derived from alignment at ch5:2188373..2189826+ (Aspergillus niger KJC3)
GTGAGTGGCAATACAATACTTCCTCATCGGGAATTCACCTCCATCCATAA
CCTCTCACACCTACCTCTTTCTTCCTCATCCACCCATCCACCCCCCAGTC
CACATACACAGAACAACCAGCTGGCCACCCAGCCCCCCCTAACAAAATGG
GCGGCGACCTCAACTTGAAGAAGTAAGCCTATCCTCTCCCCCCAACCCTC
CTCTCCTCTCTGTCCCCCATCCCGCTAACGCGATACCACCCCCAAAACAG
ATCATGGCACCCCTCCCTCCTCCGAAACCAAGAGCGCGTATGGGCAGAAG
AAAAACGCGCGCTGGAAGAGCGCAAACGCATCGACCAGCTCCGGCGCGAG
CGCGACGAAGAGCGGCAAATCCAAGAACTCCAACGGCTACAAGAAGGGTC
CGGGAAACCGAAGCAGATCCAGCGCGTGGACTGGATGTATCAGGAGCCTG
GGGCCGGAGGAGCAGGTGGAGGAATGTACGCGGAGGAAATGGAGGGGTAT
CTTTTGGGGAAAAGACGGATCGATGGCGTTCTGTTGAAGAAAGATGGCGG
CGAGACGGAGGGGTTGAAGAAGGGGGCGGAGTTTAATGCGACGCTTGGAG
GTGGTGGTGCGGTGGCGCAGGCGAATCCCAGAGATACTATGGCCAAGGTG
TTGGCGGATCCGCTGTTGGAGATCAGGAAGAGGGAGCAGGCGGCGTTGGA
GGGGATGGTTAGGGAGGAGGTTAGGAAGGGATCTTCTTCAAAGGGAGAGA
AGAGGGATAGGGATAGGGATGGTCATAGGGAGAGGAGGAGGGAGAGAGAG
AGGAGGCATCGGTCGAGGTCGCCGGAGAGGAGGCGGAGAGATACACTTGA
TCGGGATGATAGGAGGAGCGAGAGGGATCATAGAAGAGAGAGGGACAGTG
ATCGGGACTACCATCGCTCTAGCAGACATCGGGATCATCGAGATCGTGAA
GACCGGTATGACCGGCGAGAGTCGCGACAGGATCGATCCCCTGCGGATCG
CCATCACTCTGACAGACGGCGAGCCGATGATCGGAGAGAAAGCGATGGGC
ACAGAGATTCTCGAGACAGAGACCGTGAGCGTGATCGCAGAGACCGAGAC
CGATCCAGTCGCTACCACCAAGATAAGAGAGACTATCGTCCGCGAGACAG
AGACACATACACCCGCGACAAGCCCAGCCCCGAAGAAGCGGAGCAGAAGC
GCAAGCAGCAAGAGGAAGAACGACAGCGCAAGCTAGCAGAGATGCAAGCG
AACGCGAGCGAGATGGAAGATGCTCGTCGACAGCGCATTGCGGAGGTCAC
TGCGATGGAAGAGAAGCAGCATGAAGAAGATGAGAAGCATCGCTCGGAGA
AGGGTCGCTTTGTGTCTGGGCTGCATAAACAGCTTCAGGAGGATAGTCTC
GATGAGCGAATTAAGCGCAGTCGGGGTGGATTGGCTCGTATGGATGAGGA
TTAA back to topCoding sequence (CDS) from alignment at ch5:2188373..2189826+ >KJC3_007339-T1 ID=KJC3_007339-T1|Name=KJC3_007339-T1|organism=Aspergillus niger KJC3|type=CDS|length=2460bp|location=Sequence derived from alignment at ch5:2188373..2189826+ (Aspergillus niger KJC3)
ATGGGCGGCGACCTCAACTTGAAGAAATCATGGCACCCCTCCCTCCTCCG
AAACCAAGAGCGCGTATGGGCAGAAGAAAAACGCGCGCTGGAAGAGCGCA
AACGCATCGACCAGCTCCGGCGCGAGCGCGACGAAGAGCGGCAAATCCAA
GAACTCCAACGGCTACAAGAAGGGTCCGGGAAACCGAAGCAGATCCAGCG
CGTGGACTGGATGTATCAGGAGCCTGGGGCCGGAGGAGCAGGTGGAGGAA
TGTACGCGGAGGAAATGGAGGGGTATCTTTTGGGGAAAAGACGGATCGAT
GGCGTTCTGTTGAAGAAAGATGGCGGCGAGACGGAGGGGTTGAAGAAGGG
GGCGGAGTTTAATGCGACGCTTGGAGGTGGTGGTGCGGTGGCGCAGGCGA
ATCCCAGAGATACTATGGCCAAGGTGTTGGCGGATCCGCTGTTGGAGATC
AGGAAGAGGGAGCAGGCGGCGTTGGAGGGGATGGTTAGGGAGGAGGTTAG
GAAGGGATCTTCTTCAAAGGGAGAGAAGAGGGATAGGGATAGGGATGGTC
ATAGGGAGAGGAGGAGGGAGAGAGAGAGGAGGCATCGGTCGAGGTCGCCG
GAGAGGAGGCGGAGAGATACACTTGATCGGGATGATAGGAGGAGCGAGAG
GGATCATAGAAGAGAGAGGGACAGTGATCGGGACTACCATCGCTCTAGCA
GACATCGGGATCATCGAGATCGTGAAGACCGGTATGACCGGCGAGAGTCG
CGACAGGATCGATCCCCTGCGGATCGCCATCACTCTGACAGACGGCGAGC
CGATGATCGGAGAGAAAGCGATGGGCACAGAGATTCTCGAGACAGAGACC
GTGAGCGTGATCGCAGAGACCGAGACCGATCCAGTCGCTACCACCAAGAT
AAGAGAGACTATCGTCCGCGAGACAGAGACACATACACCCGCGACAAGCC
CAGCCCCGAAGAAGCGGAGCAGAAGCGCAAGCAGCAAGAGGAAGAACGAC
AGCGCAAGCTAGCAGAGATGCAAGCGAACGCGAGCGAGATGGAAGATGCT
CGTCGACAGCGCATTGCGGAGGTCACTGCGATGGAAGAGAAGCAGCATGA
AGAAGATGAGAAGCATCGCTCGGAGAAGGGTCGCTTTGTGTCTGGGCTGC
ATAAACAGCTTCAGGAGGATAGTCTCGATGAGCGAATTAAGCGCAGTCGG
GGTGGATTGGCTCGTATGGATGAGGATTAAATGGGCGGCGACCTCAACTT
GAAGAAATCATGGCACCCCTCCCTCCTCCGAAACCAAGAGCGCGTATGGG
CAGAAGAAAAACGCGCGCTGGAAGAGCGCAAACGCATCGACCAGCTCCGG
CGCGAGCGCGACGAAGAGCGGCAAATCCAAGAACTCCAACGGCTACAAGA
AGGGTCCGGGAAACCGAAGCAGATCCAGCGCGTGGACTGGATGTATCAGG
AGCCTGGGGCCGGAGGAGCAGGTGGAGGAATGTACGCGGAGGAAATGGAG
GGGTATCTTTTGGGGAAAAGACGGATCGATGGCGTTCTGTTGAAGAAAGA
TGGCGGCGAGACGGAGGGGTTGAAGAAGGGGGCGGAGTTTAATGCGACGC
TTGGAGGTGGTGGTGCGGTGGCGCAGGCGAATCCCAGAGATACTATGGCC
AAGGTGTTGGCGGATCCGCTGTTGGAGATCAGGAAGAGGGAGCAGGCGGC
GTTGGAGGGGATGGTTAGGGAGGAGGTTAGGAAGGGATCTTCTTCAAAGG
GAGAGAAGAGGGATAGGGATAGGGATGGTCATAGGGAGAGGAGGAGGGAG
AGAGAGAGGAGGCATCGGTCGAGGTCGCCGGAGAGGAGGCGGAGAGATAC
ACTTGATCGGGATGATAGGAGGAGCGAGAGGGATCATAGAAGAGAGAGGG
ACAGTGATCGGGACTACCATCGCTCTAGCAGACATCGGGATCATCGAGAT
CGTGAAGACCGGTATGACCGGCGAGAGTCGCGACAGGATCGATCCCCTGC
GGATCGCCATCACTCTGACAGACGGCGAGCCGATGATCGGAGAGAAAGCG
ATGGGCACAGAGATTCTCGAGACAGAGACCGTGAGCGTGATCGCAGAGAC
CGAGACCGATCCAGTCGCTACCACCAAGATAAGAGAGACTATCGTCCGCG
AGACAGAGACACATACACCCGCGACAAGCCCAGCCCCGAAGAAGCGGAGC
AGAAGCGCAAGCAGCAAGAGGAAGAACGACAGCGCAAGCTAGCAGAGATG
CAAGCGAACGCGAGCGAGATGGAAGATGCTCGTCGACAGCGCATTGCGGA
GGTCACTGCGATGGAAGAGAAGCAGCATGAAGAAGATGAGAAGCATCGCT
CGGAGAAGGGTCGCTTTGTGTCTGGGCTGCATAAACAGCTTCAGGAGGAT
AGTCTCGATGAGCGAATTAAGCGCAGTCGGGGTGGATTGGCTCGTATGGA
TGAGGATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007339-T1.utr5p1 | KJC3_007339-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022209 |
| DBxref | InterPro:IPR019339 |
| DBxref | PFAM:PF12542 |
| DBxref | PFAM:PF10197 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2188373..2189826 + |
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