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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2202013..2203941+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007346-T1 ID=KJC3_007346-T1|Name=KJC3_007346-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1929bp|location=Sequence derived from alignment at ch5:2202013..2203941+ (Aspergillus niger KJC3)
CTCTTCGAATTCCAACAGAAGGATTTTCACCGTGGGGACTGAGTATAAGC
CTTAAGAGATTTTCGCAAGGCTAATCATCAATTACTGTTGCCTTTTTAAT
TGCTACAGCTATGGATGCTTCGCCAACCAAACACACCCGCAATGTCTCTA
GATGTAAGGAGCATTAATGTTCGATGCTTGTTGTATCATCGGCAATCTGA
AGAATACAAGGCTGATTCGTCCTAGCTTCAAGGCCGCGTAGCACGACGAA
GGGCCCTCTAGATCAGCCAGATGAGTGAGCAGCGGATCTGCTTGATGAAT
TAGGTCTATACTAACAATTACAAGCCCGCTCGGCTCCGAAACAGTGAACA
CAGCCGCATCCCCAAGACCAGCTACAGCAGGCGATGGTGGATTTACCGGC
GCTTCATTTAGCAGACTGGACCCATTGCGGCCGGATGAACTGCCACCAAC
AGTGGAGAAAGACCTCTCGTACCTACTTCGGTATGATGTGTATCATTCTC
TCTCTCAGGTAGAAATACCGCACGCGCTTCGCTCCGAGTTCCTTGCCCCA
ACGTCAGATGAATCGCTGTCCACAAGCCTGGCCACTCTTGAGCGGCTTCT
GGCTGAAGGCCACTTTTTGCTCGCCGCTTACTTGTGTGGAACGATCTTAA
CATCTTCTTTGATCTCGGCTACTGACATCAAACGAATCTTTGCTCTTTTT
TACACTCGGCTAGCGTGTCTGCAACTATCTGGAAATACGATCATTGCAGC
GCAAGAATCAAAGGCGCTTGAAGACCTGAGCTCCGCATTCTATTATGTGG
AACCGATTTCCGGGACGTCTGATAAGCACTCAAACTATCCTCGTCACATC
GTACCATGGCCCCTACGGGTGTTGGCTATCAGACTCCAGAGCATTGGGTT
CGGCGACTCACGTAGGGGCATCGGTGGACTCTACGAGATTGGCTTGGAAG
CGCGAAGGGAGATTCTGCGGCCAGATATGGACCCCGAAGAGCGTAAGTTG
TGGAGAGAAAGACTGTCTGACCTCGGGATGAGAAATGTGAACGCGCTCAT
TGAAATGGGGGATTTGGATGCCGCCAGGAGGTCACTCGCTAGCTTACGCA
TGGCGGAGTCGGAAAGCGAGATCAACAAACTGAGGAAAGTACTTTTGATG
CTCATAATTGGCGATCTTGATGCTGCGAGGCAGGTGTGTGGCGAAGAGAG
CGATGCCGGGAACACCGTGTTCCGCCCGCTTCTCAGTATGGCCGAGGGTC
GGTACGACGACGCAGTGGCTGAATGGCGCGCCTTACTTGGCAACGAGGAA
CACAGACCCGATGAGTCCATGATCTCGCAGAACCTGGCGGTATGCTTGTT
GTACACTGGTAGGTTGAACGAAGTAAGTCATATTCCCTAAAGATTACCTA
CCACCAAGCCCGTGCTTAACCCTGCCACAGGCACGTGAGGTCCTTGAGTC
ACTGGTGCACACAAATCACTCGTTCTCGAGTCTCGTGTTCAACCTCTCAA
CAGTCTATGAGCTCTGTTCCGATAAATCCGCCAAGCTAAAGACCGACCTT
GTAGAGACTGTGGCCAGACAACCCGTCACTGGGACTACTAATCTTGATCG
GCCTAACGGGGACTTCAAACTTTAATGACGGCAGCAAGGATCACGAAAAG
TCTACACTTCAATGGCAAGAAGATCCCAGGTTCTAAGACTGGTGCGCTAT
ACTAAAAATGCTTGTCGGATCCTCCTGCCATATAGCTGTCTATACACCTG
AAACAAACGCCATACTCCGCCAATGCCCGTATAAGCGCCAATTAACGATA
CAGCAATGACATTATCCGCGATAACATCATGGATTCTCCTTTATGGGTGC
AAGATTATTTTGCGGTCTTTGCTTCGGCTTCCGAATAATGATTCTATCGC
CCTCTTTCTCCCAACCCAGGCTCTCCGCC back to topCoding sequence (CDS) from alignment at ch5:2202013..2203941+ >KJC3_007346-T1 ID=KJC3_007346-T1|Name=KJC3_007346-T1|organism=Aspergillus niger KJC3|type=CDS|length=5340bp|location=Sequence derived from alignment at ch5:2202013..2203941+ (Aspergillus niger KJC3)
ATGGATGCTTCGCCAACCAAACACACCCGCAATGTCTCTAGATCTTCAAG
GCCGCGTAGCACGACGAAGGGCCCTCTAGATCAGCCAGATGACCCGCTCG
GCTCCGAAACAGTGAACACAGCCGCATCCCCAAGACCAGCTACAGCAGGC
GATGGTGGATTTACCGGCGCTTCATTTAGCAGACTGGACCCATTGCGGCC
GGATGAACTGCCACCAACAGTGGAGAAAGACCTCTCGTACCTACTTCGGT
ATGATGTGTATCATTCTCTCTCTCAGGTAGAAATACCGCACGCGCTTCGC
TCCGAGTTCCTTGCCCCAACGTCAGATGAATCGCTGTCCACAAGCCTGGC
CACTCTTGAGCGGCTTCTGGCTGAAGGCCACTTTTTGCTCGCCGCTTACT
TGTGTGGAACGATCTTAACATCTTCTTTGATCTCGGCTACTGACATCAAA
CGAATCTTTGCTCTTTTTTACACTCGGCTAGCGTGTCTGCAACTATCTGG
AAATACGATCATTGCAGCGCAAGAATCAAAGGCGCTTGAAGACCTGAGCT
CCGCATTCTATTATGTGGAACCGATTTCCGGGACGTCTGATAAGCACTCA
AACTATCCTCGTCACATCGTACCATGGCCCCTACGGGTGTTGGCTATCAG
ACTCCAGAGCATTGGGTTCGGCGACTCACGTAGGGGCATCGGTGGACTCT
ACGAGATTGGCTTGGAAGCGCGAAGGGAGATTCTGCGGCCAGATATGGAC
CCCGAAGAGCGTAAGTTGTGGAGAGAAAGACTGTCTGACCTCGGGATGAG
AAATGTGAACGCGCTCATTGAAATGGGGGATTTGGATGCCGCCAGGAGGT
CACTCGCTAGCTTACGCATGGCGGAGTCGGAAAGCGAGATCAACAAACTG
AGGAAAGTACTTTTGATGCTCATAATTGGCGATCTTGATGCTGCGAGGCA
GGTGTGTGGCGAAGAGAGCGATGCCGGGAACACCGTGTTCCGCCCGCTTC
TCAGTATGGCCGAGGGTCGGTACGACGACGCAGTGGCTGAATGGCGCGCC
TTACTTGGCAACGAGGAACACAGACCCGATGAGTCCATGATCTCGCAGAA
CCTGGCGGTATGCTTGTTGTACACTGGTAGGTTGAACGAAGCACGTGAGG
TCCTTGAGTCACTGGTGCACACAAATCACTCGTTCTCGAGTCTCGTGTTC
AACCTCTCAACAGTCTATGAGCTCTGTTCCGATAAATCCGCCAAGCTAAA
GACCGACCTTGTAGAGACTGTGGCCAGACAACCCGTCACTGGGACTACTA
ATCTTGATCGGCCTAACGGGGACTTCAAACTTTAAATGGATGCTTCGCCA
ACCAAACACACCCGCAATGTCTCTAGATCTTCAAGGCCGCGTAGCACGAC
GAAGGGCCCTCTAGATCAGCCAGATGACCCGCTCGGCTCCGAAACAGTGA
ACACAGCCGCATCCCCAAGACCAGCTACAGCAGGCGATGGTGGATTTACC
GGCGCTTCATTTAGCAGACTGGACCCATTGCGGCCGGATGAACTGCCACC
AACAGTGGAGAAAGACCTCTCGTACCTACTTCGGTATGATGTGTATCATT
CTCTCTCTCAGGTAGAAATACCGCACGCGCTTCGCTCCGAGTTCCTTGCC
CCAACGTCAGATGAATCGCTGTCCACAAGCCTGGCCACTCTTGAGCGGCT
TCTGGCTGAAGGCCACTTTTTGCTCGCCGCTTACTTGTGTGGAACGATCT
TAACATCTTCTTTGATCTCGGCTACTGACATCAAACGAATCTTTGCTCTT
TTTTACACTCGGCTAGCGTGTCTGCAACTATCTGGAAATACGATCATTGC
AGCGCAAGAATCAAAGGCGCTTGAAGACCTGAGCTCCGCATTCTATTATG
TGGAACCGATTTCCGGGACGTCTGATAAGCACTCAAACTATCCTCGTCAC
ATCGTACCATGGCCCCTACGGGTGTTGGCTATCAGACTCCAGAGCATTGG
GTTCGGCGACTCACGTAGGGGCATCGGTGGACTCTACGAGATTGGCTTGG
AAGCGCGAAGGGAGATTCTGCGGCCAGATATGGACCCCGAAGAGCGTAAG
TTGTGGAGAGAAAGACTGTCTGACCTCGGGATGAGAAATGTGAACGCGCT
CATTGAAATGGGGGATTTGGATGCCGCCAGGAGGTCACTCGCTAGCTTAC
GCATGGCGGAGTCGGAAAGCGAGATCAACAAACTGAGGAAAGTACTTTTG
ATGCTCATAATTGGCGATCTTGATGCTGCGAGGCAGGTGTGTGGCGAAGA
GAGCGATGCCGGGAACACCGTGTTCCGCCCGCTTCTCAGTATGGCCGAGG
GTCGGTACGACGACGCAGTGGCTGAATGGCGCGCCTTACTTGGCAACGAG
GAACACAGACCCGATGAGTCCATGATCTCGCAGAACCTGGCGGTATGCTT
GTTGTACACTGGTAGGTTGAACGAAGCACGTGAGGTCCTTGAGTCACTGG
TGCACACAAATCACTCGTTCTCGAGTCTCGTGTTCAACCTCTCAACAGTC
TATGAGCTCTGTTCCGATAAATCCGCCAAGCTAAAGACCGACCTTGTAGA
GACTGTGGCCAGACAACCCGTCACTGGGACTACTAATCTTGATCGGCCTA
ACGGGGACTTCAAACTTTAAATGGATGCTTCGCCAACCAAACACACCCGC
AATGTCTCTAGATCTTCAAGGCCGCGTAGCACGACGAAGGGCCCTCTAGA
TCAGCCAGATGACCCGCTCGGCTCCGAAACAGTGAACACAGCCGCATCCC
CAAGACCAGCTACAGCAGGCGATGGTGGATTTACCGGCGCTTCATTTAGC
AGACTGGACCCATTGCGGCCGGATGAACTGCCACCAACAGTGGAGAAAGA
CCTCTCGTACCTACTTCGGTATGATGTGTATCATTCTCTCTCTCAGGTAG
AAATACCGCACGCGCTTCGCTCCGAGTTCCTTGCCCCAACGTCAGATGAA
TCGCTGTCCACAAGCCTGGCCACTCTTGAGCGGCTTCTGGCTGAAGGCCA
CTTTTTGCTCGCCGCTTACTTGTGTGGAACGATCTTAACATCTTCTTTGA
TCTCGGCTACTGACATCAAACGAATCTTTGCTCTTTTTTACACTCGGCTA
GCGTGTCTGCAACTATCTGGAAATACGATCATTGCAGCGCAAGAATCAAA
GGCGCTTGAAGACCTGAGCTCCGCATTCTATTATGTGGAACCGATTTCCG
GGACGTCTGATAAGCACTCAAACTATCCTCGTCACATCGTACCATGGCCC
CTACGGGTGTTGGCTATCAGACTCCAGAGCATTGGGTTCGGCGACTCACG
TAGGGGCATCGGTGGACTCTACGAGATTGGCTTGGAAGCGCGAAGGGAGA
TTCTGCGGCCAGATATGGACCCCGAAGAGCGTAAGTTGTGGAGAGAAAGA
CTGTCTGACCTCGGGATGAGAAATGTGAACGCGCTCATTGAAATGGGGGA
TTTGGATGCCGCCAGGAGGTCACTCGCTAGCTTACGCATGGCGGAGTCGG
AAAGCGAGATCAACAAACTGAGGAAAGTACTTTTGATGCTCATAATTGGC
GATCTTGATGCTGCGAGGCAGGTGTGTGGCGAAGAGAGCGATGCCGGGAA
CACCGTGTTCCGCCCGCTTCTCAGTATGGCCGAGGGTCGGTACGACGACG
CAGTGGCTGAATGGCGCGCCTTACTTGGCAACGAGGAACACAGACCCGAT
GAGTCCATGATCTCGCAGAACCTGGCGGTATGCTTGTTGTACACTGGTAG
GTTGAACGAAGCACGTGAGGTCCTTGAGTCACTGGTGCACACAAATCACT
CGTTCTCGAGTCTCGTGTTCAACCTCTCAACAGTCTATGAGCTCTGTTCC
GATAAATCCGCCAAGCTAAAGACCGACCTTGTAGAGACTGTGGCCAGACA
ACCCGTCACTGGGACTACTAATCTTGATCGGCCTAACGGGGACTTCAAAC
TTTAAATGGATGCTTCGCCAACCAAACACACCCGCAATGTCTCTAGATCT
TCAAGGCCGCGTAGCACGACGAAGGGCCCTCTAGATCAGCCAGATGACCC
GCTCGGCTCCGAAACAGTGAACACAGCCGCATCCCCAAGACCAGCTACAG
CAGGCGATGGTGGATTTACCGGCGCTTCATTTAGCAGACTGGACCCATTG
CGGCCGGATGAACTGCCACCAACAGTGGAGAAAGACCTCTCGTACCTACT
TCGGTATGATGTGTATCATTCTCTCTCTCAGGTAGAAATACCGCACGCGC
TTCGCTCCGAGTTCCTTGCCCCAACGTCAGATGAATCGCTGTCCACAAGC
CTGGCCACTCTTGAGCGGCTTCTGGCTGAAGGCCACTTTTTGCTCGCCGC
TTACTTGTGTGGAACGATCTTAACATCTTCTTTGATCTCGGCTACTGACA
TCAAACGAATCTTTGCTCTTTTTTACACTCGGCTAGCGTGTCTGCAACTA
TCTGGAAATACGATCATTGCAGCGCAAGAATCAAAGGCGCTTGAAGACCT
GAGCTCCGCATTCTATTATGTGGAACCGATTTCCGGGACGTCTGATAAGC
ACTCAAACTATCCTCGTCACATCGTACCATGGCCCCTACGGGTGTTGGCT
ATCAGACTCCAGAGCATTGGGTTCGGCGACTCACGTAGGGGCATCGGTGG
ACTCTACGAGATTGGCTTGGAAGCGCGAAGGGAGATTCTGCGGCCAGATA
TGGACCCCGAAGAGCGTAAGTTGTGGAGAGAAAGACTGTCTGACCTCGGG
ATGAGAAATGTGAACGCGCTCATTGAAATGGGGGATTTGGATGCCGCCAG
GAGGTCACTCGCTAGCTTACGCATGGCGGAGTCGGAAAGCGAGATCAACA
AACTGAGGAAAGTACTTTTGATGCTCATAATTGGCGATCTTGATGCTGCG
AGGCAGGTGTGTGGCGAAGAGAGCGATGCCGGGAACACCGTGTTCCGCCC
GCTTCTCAGTATGGCCGAGGGTCGGTACGACGACGCAGTGGCTGAATGGC
GCGCCTTACTTGGCAACGAGGAACACAGACCCGATGAGTCCATGATCTCG
CAGAACCTGGCGGTATGCTTGTTGTACACTGGTAGGTTGAACGAAGCACG
TGAGGTCCTTGAGTCACTGGTGCACACAAATCACTCGTTCTCGAGTCTCG
TGTTCAACCTCTCAACAGTCTATGAGCTCTGTTCCGATAAATCCGCCAAG
CTAAAGACCGACCTTGTAGAGACTGTGGCCAGACAACCCGTCACTGGGAC
TACTAATCTTGATCGGCCTAACGGGGACTTCAAACTTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007346-T1.utr5p1 | KJC3_007346-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007346-T1.utr3p1 | KJC3_007346-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2202013..2203941 + |
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