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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2228081..2230413- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007357-T1 ID=KJC3_007357-T1|Name=KJC3_007357-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2333bp|location=Sequence derived from alignment at ch5:2228081..2230413- (Aspergillus niger KJC3) GTTAGCGGCAGATCATGTGCCTTGCATCAGAAACATCAATAGTATATTTT
GGTGTATATTGTTTGTTGCAGAGTCAACCAAGTCACTAAAGTCCCCTCCG
GTCGTAGGCGGTGGGACAAAGGACTGGCAGTCAGTAAATGGAGTCAGCCA
GCAAGCCAGCAAAGCTTACTCAACTGCAGCTGGGGCACTAACTATGGGCC
ACTCTATCATCGATGACGCCAGAATTGGGGGAAGCTGGCCTGCTCCTCGT
CATACGTCACTCGATGCTCATCCCGCGCCGCCTCCCTGATTCTCTCTTTA
ACGAGAGATCGTCAGCTCTGCGGCCAATAAATATCTTCATCCCGGGACGT
AGTGGTCTTAATCTCTCTTGCTTAAGATCTCACAATTAACAATTGTAAGT
TGCCCTCACTGATACTTTATGTTTTTGTTCGTGGTGAGACGAGAGCTAAC
CTTGACGCTATAAGCCAACAACAACAGCAATCAACGCTCGATATAATTTC
TACATCTCGCCAGGATGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCG
CTTGCAACCTTTGAGGCGGTTGGAGCGTCCAGCTGGTTCAGCAAGGCTGG
TATGTCAACTTCTGTACCATTGACTGATTTGACTGCTCCACATCGAGACA
CTCGCTAACACCCCTTAGTTTACAACAAATGGCATGAGACTGAGTTAGAA
AGATGGCTCTCCGATCATGGTATGCTGCTTCCTCCCATATATTCTTCCCA
TGAAGCATAGTTGACAACGTCTTTAGACATCCCGTACCCATCGCCGGCCG
ATCGCAAGGATCTCGAGTCCCTAGTGAAGTCCAACTGGGAAGCTAAAGTC
CAGAAGCCCCTAGCACATGTTACACAGCACTCTCATGATCACTGGCATGA
TGCCAAGGAATGGCTCTTTGACACGTAAGTCTATGCGAGATTGTCCTTCC
CGTAGTTAGAATGTACTAATAGTCTACACAGGTGGTCCGACTCCCAGTTG
AAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAGCCTCGCAAGCG
TGATACTCTTTTGAAAACTGCTCGCGAAAACTATGAGTCTATTGCCACGA
AGCTTGGGGAGGCTGTCGCCTATCCTGGTAACTGGGTATACGAGCAATGG
ACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTGGCTGGCCGGTTCC
ACAGCCCACCACGCGCGACAGGCTTATTGCATCGGTTCGTCGTAATGCTC
GACTGGCCAGTTTGAACGCGAAGAGCATCGCTGCCTCTGCCTCTGCCTCT
GCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTCAAGGCTTGGTC
CGACTCCGATCTGAAGAAGTTCCTCGATGAACACGGTGTCAAGGTACCCC
AAGGATCTCGCCGCAATGAACTCGTGGCTCTGGCGAGGAAGCACCGCGCC
TCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATTTCGTCCACCGC
TACTCAGATCATTGGAGCCGCTACCTCCAAAGCTGGTAACGAATACGGCA
AAGCCACCGATGTTGCCGAGTCCAAGGCCCAAGATACCTTCGATACCGTA
ATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTCGATGCGCGCGG
AGTTCCCGTTCCTCAAAGCAACAAGCGTGACGAGCTCCTTGCTAAGGTGC
GGCTCCACAGCCACAAGGCAGCTACTGGCTGGTCTGCTTGGACCTTTGAT
ACCTGGGACACCGAGCATTTGAAGTAAGACTCCTACTTGGATAACTTTAG
ACAACATTCTCTAACATATATATAGGAAGTACCTGTCCTCCATGAATGCC
AAGGCAGCCCACCGCGCCGACATTACTCGCGACGAGCTTGTCAAGCAAGC
CCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGCAAACCTCGCAT
CGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCAAGGGTTCCGCC
TTCGACACCTGGACCCATTCCGATCTCAAGGCTTACCTTGACTCGTACGG
CATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCGCGCCGCTGCTC
GCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTCCTTCGGGAACC
ATCTTCGCTAAGATGCAAGAGGCCGGCCAGTGGCTTCTGGATCAGCTGAA
GATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGCCGCTGAGAAGG
CCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCCCAGGGATCC
CATGCTGCCTCGAGCATGCGGGTCGAGCTGTAA back to topCoding sequence (CDS) from alignment at ch5:2228081..2230413- >KJC3_007357-T1 ID=KJC3_007357-T1|Name=KJC3_007357-T1|organism=Aspergillus niger KJC3|type=CDS|length=7920bp|location=Sequence derived from alignment at ch5:2228081..2230413- (Aspergillus niger KJC3) GAAGTACCTGTCCTCCATGAATGCCAAGGCAGCCCACCGCGCCGACATTA CTCGCGACGAGCTTGTCAAGCAAGCCCAGGAGAACTACGCCAAGGCATCC AAAGCCGGAGGCGCAAACCTCGCATCGGCCACCTCATACATGGCGCAGGC CACCGATGCAGCCAAGGGTTCCGCCTTCGACACCTGGACCCATTCCGATC TCAAGGCTTACCTTGACTCGTACGGCATCCCGGTCTATCAGGGCTCCGGA ATCAACGAACTCCGCGCCGCTGCTCGCCGCAATGCGGAATACTTCCGCTA TGGCACTTCGTCTCCTTCGGGAACCATCTTCGCTAAGATGCAAGAGGCCG GCCAGTGGCTTCTGGATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCC CAGGGTCAGGAAGCCGCTGAGAAGGCCAAGGCTAAGGGGTCTGAGGCTGC TGAGAAAGCCAAGGCCCAGGGATCCCATGCTGCCTCGAGCATGCGGGTCG AGCTGTAAGTGGTCCGACTCCCAGTTGAAGGCGTTCCTTGATCGTCATGG TGTTCCTGCCCCCCAGCCTCGCAAGCGTGATACTCTTTTGAAAACTGCTC GCGAAAACTATGAGTCTATTGCCACGAAGCTTGGGGAGGCTGTCGCCTAT CCTGGTAACTGGGTATACGAGCAATGGACCGAGTCTGATCTAAAGGAATG GCTTGATGAGCGTGGCTGGCCGGTTCCACAGCCCACCACGCGCGACAGGC TTATTGCATCGGTTCGTCGTAATGCTCGACTGGCCAGTTTGAACGCGAAG AGCATCGCTGCCTCTGCCTCTGCCTCTGCGGAAGCTGCGCAGGCTACTCT GAGCGATGCCCTGTTCAAGGCTTGGTCCGACTCCGATCTGAAGAAGTTCC TCGATGAACACGGTGTCAAGGTACCCCAAGGATCTCGCCGCAATGAACTC GTGGCTCTGGCGAGGAAGCACCGCGCCTCTCTGGTTAGCCAGGCTTCGGA GGCCTCTGCCACCATTTCGTCCACCGCTACTCAGATCATTGGAGCCGCTA CCTCCAAAGCTGGTAACGAATACGGCAAAGCCACCGATGTTGCCGAGTCC AAGGCCCAAGATACCTTCGATACCGTAATTCAAGGCTGGTCTGACTCGCG CTTGAAGGCTTTCCTCGATGCGCGCGGAGTTCCCGTTCCTCAAAGCAACA AGCGTGACGAGCTCCTTGCTAAGGTGCGGCTCCACAGCCACAAGGCAGCT ACTGGCTGGTCTGCTTGGACCTTTGATACCTGGGACACCGAGCATTTGAA ACATCCCGTACCCATCGCCGGCCGATCGCAAGGATCTCGAGTCCCTAGTG AAGTCCAACTGGGAAGCTAAAGTCCAGAAGCCCCTAGCACATGTTACACA GCACTCTCATGATCACTGGCATGATGCCAAGGAATGGCTCTTTGACACTT TACAACAAATGGCATGAGACTGAGTTAGAAAGATGGCTCTCCGATCATGA TGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCGCTTGCAACCTTTGAG GCGGTTGGAGCGTCCAGCTGGTTCAGCAAGGCTGGAAGTACCTGTCCTCC ATGAATGCCAAGGCAGCCCACCGCGCCGACATTACTCGCGACGAGCTTGT CAAGCAAGCCCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGCAA ACCTCGCATCGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCAAG GGTTCCGCCTTCGACACCTGGACCCATTCCGATCTCAAGGCTTACCTTGA CTCGTACGGCATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCGCG CCGCTGCTCGCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTCCT TCGGGAACCATCTTCGCTAAGATGCAAGAGGCCGGCCAGTGGCTTCTGGA TCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGCCG CTGAGAAGGCCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCC CAGGGATCCCATGCTGCCTCGAGCATGCGGGTCGAGCTGTAAGTGGTCCG ACTCCCAGTTGAAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAG CCTCGCAAGCGTGATACTCTTTTGAAAACTGCTCGCGAAAACTATGAGTC TATTGCCACGAAGCTTGGGGAGGCTGTCGCCTATCCTGGTAACTGGGTAT ACGAGCAATGGACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTGGC TGGCCGGTTCCACAGCCCACCACGCGCGACAGGCTTATTGCATCGGTTCG TCGTAATGCTCGACTGGCCAGTTTGAACGCGAAGAGCATCGCTGCCTCTG CCTCTGCCTCTGCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTC AAGGCTTGGTCCGACTCCGATCTGAAGAAGTTCCTCGATGAACACGGTGT CAAGGTACCCCAAGGATCTCGCCGCAATGAACTCGTGGCTCTGGCGAGGA AGCACCGCGCCTCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATT TCGTCCACCGCTACTCAGATCATTGGAGCCGCTACCTCCAAAGCTGGTAA CGAATACGGCAAAGCCACCGATGTTGCCGAGTCCAAGGCCCAAGATACCT TCGATACCGTAATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTC GATGCGCGCGGAGTTCCCGTTCCTCAAAGCAACAAGCGTGACGAGCTCCT TGCTAAGGTGCGGCTCCACAGCCACAAGGCAGCTACTGGCTGGTCTGCTT GGACCTTTGATACCTGGGACACCGAGCATTTGAAACATCCCGTACCCATC GCCGGCCGATCGCAAGGATCTCGAGTCCCTAGTGAAGTCCAACTGGGAAG CTAAAGTCCAGAAGCCCCTAGCACATGTTACACAGCACTCTCATGATCAC TGGCATGATGCCAAGGAATGGCTCTTTGACACTTTACAACAAATGGCATG AGACTGAGTTAGAAAGATGGCTCTCCGATCATGATGAAGCTCCATTTGGC TTCGTATCTGGTATTTGCGCTTGCAACCTTTGAGGCGGTTGGAGCGTCCA GCTGGTTCAGCAAGGCTGGAAGTACCTGTCCTCCATGAATGCCAAGGCAG CCCACCGCGCCGACATTACTCGCGACGAGCTTGTCAAGCAAGCCCAGGAG AACTACGCCAAGGCATCCAAAGCCGGAGGCGCAAACCTCGCATCGGCCAC CTCATACATGGCGCAGGCCACCGATGCAGCCAAGGGTTCCGCCTTCGACA CCTGGACCCATTCCGATCTCAAGGCTTACCTTGACTCGTACGGCATCCCG GTCTATCAGGGCTCCGGAATCAACGAACTCCGCGCCGCTGCTCGCCGCAA TGCGGAATACTTCCGCTATGGCACTTCGTCTCCTTCGGGAACCATCTTCG CTAAGATGCAAGAGGCCGGCCAGTGGCTTCTGGATCAGCTGAAGATCGGC GCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGCCGCTGAGAAGGCCAAGGC TAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGGCCCAGGGATCCCATGCTG CCTCGAGCATGCGGGTCGAGCTGTAAGTGGTCCGACTCCCAGTTGAAGGC GTTCCTTGATCGTCATGGTGTTCCTGCCCCCCAGCCTCGCAAGCGTGATA CTCTTTTGAAAACTGCTCGCGAAAACTATGAGTCTATTGCCACGAAGCTT GGGGAGGCTGTCGCCTATCCTGGTAACTGGGTATACGAGCAATGGACCGA GTCTGATCTAAAGGAATGGCTTGATGAGCGTGGCTGGCCGGTTCCACAGC CCACCACGCGCGACAGGCTTATTGCATCGGTTCGTCGTAATGCTCGACTG GCCAGTTTGAACGCGAAGAGCATCGCTGCCTCTGCCTCTGCCTCTGCGGA AGCTGCGCAGGCTACTCTGAGCGATGCCCTGTTCAAGGCTTGGTCCGACT CCGATCTGAAGAAGTTCCTCGATGAACACGGTGTCAAGGTACCCCAAGGA TCTCGCCGCAATGAACTCGTGGCTCTGGCGAGGAAGCACCGCGCCTCTCT GGTTAGCCAGGCTTCGGAGGCCTCTGCCACCATTTCGTCCACCGCTACTC AGATCATTGGAGCCGCTACCTCCAAAGCTGGTAACGAATACGGCAAAGCC ACCGATGTTGCCGAGTCCAAGGCCCAAGATACCTTCGATACCGTAATTCA AGGCTGGTCTGACTCGCGCTTGAAGGCTTTCCTCGATGCGCGCGGAGTTC CCGTTCCTCAAAGCAACAAGCGTGACGAGCTCCTTGCTAAGGTGCGGCTC CACAGCCACAAGGCAGCTACTGGCTGGTCTGCTTGGACCTTTGATACCTG GGACACCGAGCATTTGAAACATCCCGTACCCATCGCCGGCCGATCGCAAG GATCTCGAGTCCCTAGTGAAGTCCAACTGGGAAGCTAAAGTCCAGAAGCC CCTAGCACATGTTACACAGCACTCTCATGATCACTGGCATGATGCCAAGG AATGGCTCTTTGACACTTTACAACAAATGGCATGAGACTGAGTTAGAAAG ATGGCTCTCCGATCATGATGAAGCTCCATTTGGCTTCGTATCTGGTATTT GCGCTTGCAACCTTTGAGGCGGTTGGAGCGTCCAGCTGGTTCAGCAAGGC TGGAAGTACCTGTCCTCCATGAATGCCAAGGCAGCCCACCGCGCCGACAT TACTCGCGACGAGCTTGTCAAGCAAGCCCAGGAGAACTACGCCAAGGCAT CCAAAGCCGGAGGCGCAAACCTCGCATCGGCCACCTCATACATGGCGCAG GCCACCGATGCAGCCAAGGGTTCCGCCTTCGACACCTGGACCCATTCCGA TCTCAAGGCTTACCTTGACTCGTACGGCATCCCGGTCTATCAGGGCTCCG GAATCAACGAACTCCGCGCCGCTGCTCGCCGCAATGCGGAATACTTCCGC TATGGCACTTCGTCTCCTTCGGGAACCATCTTCGCTAAGATGCAAGAGGC CGGCCAGTGGCTTCTGGATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTG CCCAGGGTCAGGAAGCCGCTGAGAAGGCCAAGGCTAAGGGGTCTGAGGCT GCTGAGAAAGCCAAGGCCCAGGGATCCCATGCTGCCTCGAGCATGCGGGT CGAGCTGTAAGTGGTCCGACTCCCAGTTGAAGGCGTTCCTTGATCGTCAT GGTGTTCCTGCCCCCCAGCCTCGCAAGCGTGATACTCTTTTGAAAACTGC TCGCGAAAACTATGAGTCTATTGCCACGAAGCTTGGGGAGGCTGTCGCCT ATCCTGGTAACTGGGTATACGAGCAATGGACCGAGTCTGATCTAAAGGAA TGGCTTGATGAGCGTGGCTGGCCGGTTCCACAGCCCACCACGCGCGACAG GCTTATTGCATCGGTTCGTCGTAATGCTCGACTGGCCAGTTTGAACGCGA AGAGCATCGCTGCCTCTGCCTCTGCCTCTGCGGAAGCTGCGCAGGCTACT CTGAGCGATGCCCTGTTCAAGGCTTGGTCCGACTCCGATCTGAAGAAGTT CCTCGATGAACACGGTGTCAAGGTACCCCAAGGATCTCGCCGCAATGAAC TCGTGGCTCTGGCGAGGAAGCACCGCGCCTCTCTGGTTAGCCAGGCTTCG GAGGCCTCTGCCACCATTTCGTCCACCGCTACTCAGATCATTGGAGCCGC TACCTCCAAAGCTGGTAACGAATACGGCAAAGCCACCGATGTTGCCGAGT CCAAGGCCCAAGATACCTTCGATACCGTAATTCAAGGCTGGTCTGACTCG CGCTTGAAGGCTTTCCTCGATGCGCGCGGAGTTCCCGTTCCTCAAAGCAA CAAGCGTGACGAGCTCCTTGCTAAGGTGCGGCTCCACAGCCACAAGGCAG CTACTGGCTGGTCTGCTTGGACCTTTGATACCTGGGACACCGAGCATTTG AAACATCCCGTACCCATCGCCGGCCGATCGCAAGGATCTCGAGTCCCTAG TGAAGTCCAACTGGGAAGCTAAAGTCCAGAAGCCCCTAGCACATGTTACA CAGCACTCTCATGATCACTGGCATGATGCCAAGGAATGGCTCTTTGACAC TTTACAACAAATGGCATGAGACTGAGTTAGAAAGATGGCTCTCCGATCAT GATGAAGCTCCATTTGGCTTCGTATCTGGTATTTGCGCTTGCAACCTTTG AGGCGGTTGGAGCGTCCAGCTGGTTCAGCAAGGCTGGAAGTACCTGTCCT CCATGAATGCCAAGGCAGCCCACCGCGCCGACATTACTCGCGACGAGCTT GTCAAGCAAGCCCAGGAGAACTACGCCAAGGCATCCAAAGCCGGAGGCGC AAACCTCGCATCGGCCACCTCATACATGGCGCAGGCCACCGATGCAGCCA AGGGTTCCGCCTTCGACACCTGGACCCATTCCGATCTCAAGGCTTACCTT GACTCGTACGGCATCCCGGTCTATCAGGGCTCCGGAATCAACGAACTCCG CGCCGCTGCTCGCCGCAATGCGGAATACTTCCGCTATGGCACTTCGTCTC CTTCGGGAACCATCTTCGCTAAGATGCAAGAGGCCGGCCAGTGGCTTCTG GATCAGCTGAAGATCGGCGCGTCCAGTGGCCGTGCCCAGGGTCAGGAAGC CGCTGAGAAGGCCAAGGCTAAGGGGTCTGAGGCTGCTGAGAAAGCCAAGG CCCAGGGATCCCATGCTGCCTCGAGCATGCGGGTCGAGCTGTAAGTGGTC CGACTCCCAGTTGAAGGCGTTCCTTGATCGTCATGGTGTTCCTGCCCCCC AGCCTCGCAAGCGTGATACTCTTTTGAAAACTGCTCGCGAAAACTATGAG TCTATTGCCACGAAGCTTGGGGAGGCTGTCGCCTATCCTGGTAACTGGGT ATACGAGCAATGGACCGAGTCTGATCTAAAGGAATGGCTTGATGAGCGTG GCTGGCCGGTTCCACAGCCCACCACGCGCGACAGGCTTATTGCATCGGTT CGTCGTAATGCTCGACTGGCCAGTTTGAACGCGAAGAGCATCGCTGCCTC TGCCTCTGCCTCTGCGGAAGCTGCGCAGGCTACTCTGAGCGATGCCCTGT TCAAGGCTTGGTCCGACTCCGATCTGAAGAAGTTCCTCGATGAACACGGT GTCAAGGTACCCCAAGGATCTCGCCGCAATGAACTCGTGGCTCTGGCGAG GAAGCACCGCGCCTCTCTGGTTAGCCAGGCTTCGGAGGCCTCTGCCACCA TTTCGTCCACCGCTACTCAGATCATTGGAGCCGCTACCTCCAAAGCTGGT AACGAATACGGCAAAGCCACCGATGTTGCCGAGTCCAAGGCCCAAGATAC CTTCGATACCGTAATTCAAGGCTGGTCTGACTCGCGCTTGAAGGCTTTCC TCGATGCGCGCGGAGTTCCCGTTCCTCAAAGCAACAAGCGTGACGAGCTC CTTGCTAAGGTGCGGCTCCACAGCCACAAGGCAGCTACTGGCTGGTCTGC TTGGACCTTTGATACCTGGGACACCGAGCATTTGAAACATCCCGTACCCA TCGCCGGCCGATCGCAAGGATCTCGAGTCCCTAGTGAAGTCCAACTGGGA AGCTAAAGTCCAGAAGCCCCTAGCACATGTTACACAGCACTCTCATGATC ACTGGCATGATGCCAAGGAATGGCTCTTTGACACTTTACAACAAATGGCA TGAGACTGAGTTAGAAAGATGGCTCTCCGATCATGATGAAGCTCCATTTG GCTTCGTATCTGGTATTTGCGCTTGCAACCTTTGAGGCGGTTGGAGCGTC CAGCTGGTTCAGCAAGGCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-21) |
DBxref | InterPro:IPR018803 |
DBxref | PFAM:PF10281 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch5 | supercontig | ch5:2228081..2230413 - |
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