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KJC3_007359-T1, KJC3_007359-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007359-T1
Unique NameKJC3_007359-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2232277..2233446-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007359-T1 ID=KJC3_007359-T1|Name=KJC3_007359-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1170bp|location=Sequence derived from alignment at ch5:2232277..2233446- (Aspergillus niger KJC3)
CTCCTGTCTATCCCACTGCCACTGCCTCATCTCTTCGCATCCTCCTCTTT
TTAGATCTCCTAAATAACACATCCGTCAAAATGGCCGGTAAGTTCACTCT
TGCGCCGCCGCTCTCCTCGATGCGACACCCCATCTACCTCGTCTGGTGTT
TTGCTGCCCCTCCCTGAGGCTCTTAGGCCCCCTCCACGGCGAACATACAA
CCACCTTCACATACAATCATGACAGTGAAAGCTAACGCAATGCCTTAAAC
ATCTAGACTTCCAGAGCATCGCACGTACGTATTGTTACCTCCATTCTGGC
CCCCGTCCCCCGTCGACCAGGGGATGACCTGCATGCATCGTCGCATCAGG
CAGACCCCTCCGATTCCATCTGCGTCGCAGATACCCGAGTCTACCCAATA
GACTGCCCATAACATGGCCTAACATATGTCGCTACGAACAGAGCAATTTG
TGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCCGGT
CTCTACGTATGTTGAATCACCCCGCATTCCACCATTTGCAGGCCCGAGGA
ACTAACCTATATACCCCCAAATCGATAGCGCGATAACTCTATGCTCACCT
TCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACG
GTTAGTATTATCATCAGCCTTCACTGAGACCCATTATCGGCTTACTGACC
TATGCAACGTAATCATACAGAGTCTTCCTTTCCAGAAGGTCCAGCACCAG
ATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCAT
GGTTACCGGTGCCCTTATCGTACGTGCCCTGCTTTTGTTGGCGGAAGATG
CCTTCAATTCCTTCGCGCAAAATGAACCGAGGTTGGCTTGCTGTTCGTTT
GGCTTACTTTTCGCTTTTCTTTTCTTCTTATAGGTCGACGAGGAGCCCCG
CCCCATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCT
ACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAATTGCGACG
CAGGGGATTGGCGGGGATTTGATGTGACGTGTGTGATGGGTGATTTAGGA
GGCCCATGGCTTGGCCTATTCGGTAGGCAGCTCTTATGAGATGAAGATAA
TGAATTAGTTATAAGAGGAT
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Coding sequence (CDS) from alignment at ch5:2232277..2233446-

>KJC3_007359-T1 ID=KJC3_007359-T1|Name=KJC3_007359-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch5:2232277..2233446- (Aspergillus niger KJC3)
GTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCACTCTCAA
CCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTCTCATCA
TGGGTTAAAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTC
GATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGC
CCTTATCCGCGATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGG
GTGTTGCCCCCATCATGGAGAAGCTGACGAGCAATTTGTGCAATTCTACT
ACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACACTTCC
AGAGCATCGCACATGGCCGGTCGACGAGGAGCCCCGCCCCATGAACTACA
CCCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAAC
GACATCTTCCGTCTCATCATGGGTTAAAGTCTTCCTTTCCAGAAGGTCCA
GCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCA
TCGTCATGGTTACCGGTGCCCTTATCCGCGATAACTCTATGCTCACCTTC
GAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACGAG
CAATTTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCT
GGCCGGTCTCTACACTTCCAGAGCATCGCACATGGCCGGTCGACGAGGAG
CCCCGCCCCATGAACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGG
CAGCTACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGTTAAAGTC
TTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCGATGCTCAGCCC
TCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCCCTTATCCGCGA
TAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCA
TCATGGAGAAGCTGACGAGCAATTTGTGCAATTCTACTACCAGACCTTTG
ACGCGGACCGTCAGCAGCTGGCCGGTCTCTACACTTCCAGAGCATCGCAC
ATGGCCGGTCGACGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCA
CTCTCAACCCCGAGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGT
CTCATCATGGGTTAAAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTC
CACTCTCGATGCTCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTA
CCGGTGCCCTTATCCGCGATAACTCTATGCTCACCTTCGAGACTGCCTCC
CAGATGGGTGTTGCCCCCATCATGGAGAAGCTGACGAGCAATTTGTGCAA
TTCTACTACCAGACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTA
CACTTCCAGAGCATCGCACATGGCCGGTCGACGAGGAGCCCCGCCCCATG
AACTACACCCAGACCTTCACTCTCAACCCCGAGGCTGGCAGCTACTACGT
CTTCAACGACATCTTCCGTCTCATCATGGGTTAAAGTCTTCCTTTCCAGA
AGGTCCAGCACCAGATCTCCACTCTCGATGCTCAGCCCTCTGTTAACGGC
AGCATCATCGTCATGGTTACCGGTGCCCTTATCCGCGATAACTCTATGCT
CACCTTCGAGACTGCCTCCCAGATGGGTGTTGCCCCCATCATGGAGAAGC
TGACGAGCAATTTGTGCAATTCTACTACCAGACCTTTGACGCGGACCGTC
AGCAGCTGGCCGGTCTCTACACTTCCAGAGCATCGCACATGGCCGGTCGA
CGAGGAGCCCCGCCCCATGAACTACACCCAGACCTTCACTCTCAACCCCG
AGGCTGGCAGCTACTACGTCTTCAACGACATCTTCCGTCTCATCATGGGT
TAAAGTCTTCCTTTCCAGAAGGTCCAGCACCAGATCTCCACTCTCGATGC
TCAGCCCTCTGTTAACGGCAGCATCATCGTCATGGTTACCGGTGCCCTTA
TCCGCGATAACTCTATGCTCACCTTCGAGACTGCCTCCCAGATGGGTGTT
GCCCCCATCATGGAGAAGCTGACGAGCAATTTGTGCAATTCTACTACCAG
ACCTTTGACGCGGACCGTCAGCAGCTGGCCGGTCTCTACACTTCCAGAGC
ATCGCACATGGCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NTF2KJC3_007359Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007359-T1KJC3_007359-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007359-T1.cdsKJC3_007359-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007359-T1.utr3p1KJC3_007359-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007359-T1.exon6KJC3_007359-T1.exon6Aspergillus niger KJC3exon
KJC3_007359-T1.exon5KJC3_007359-T1.exon5Aspergillus niger KJC3exon
KJC3_007359-T1.exon4KJC3_007359-T1.exon4Aspergillus niger KJC3exon
KJC3_007359-T1.exon3KJC3_007359-T1.exon3Aspergillus niger KJC3exon
KJC3_007359-T1.exon2KJC3_007359-T1.exon2Aspergillus niger KJC3exon
KJC3_007359-T1.exon1KJC3_007359-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007359-T1.utr5p1KJC3_007359-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265BCT
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR018222
DBxrefInterPro:IPR002075
DBxrefPFAM:PF02136
ProductNuclear transport factor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2232277..2233446 -
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