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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2348125..2351359- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007399-T1 ID=KJC3_007399-T1|Name=KJC3_007399-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3235bp|location=Sequence derived from alignment at ch5:2348125..2351359- (Aspergillus niger KJC3)
AAGAAATTTTTTTCTTTTTGAAAGGTGGAAACCATCTCATTCAAACTTAT
CCCAACTTGAACATATCCACCTCACGGAACGGATTCCTCAGGCTTCGTGC
CTTCCTATTGTTATTTCTATTACTATTTCGATTACCATCGTTGCTTGCTT
CCTGTTCCGACGGTAAGTACGGCCGGACTCTCACTGGCCAACGATCGTTC
CGGTGATTATTCCATTCCCATTCCCTGGCCTTTCCATTGCTCTCTTTGCT
CTCTGTCCTGTCTCCATCTTCCCGTGCAGCCGGTCGGCATCTCATCATCA
TCACCGCCGCCGCCGCCCATCCTTCCCTAACTCTCCCATTCCCTTCCCAT
CCATCCATCCATCCATCCATTCATCCTCCCTCCCTCCCTCATCCTTCTCC
CCCCCCTGTGCACCATACTTCCTGTAACATTTACCCTACTTCCCCTTTCC
CCCCCCCAAATCTTTCCCACTGTCTCTCTTCTATCCTATTGTCCTTGTCT
CTCTATCTATCTCTGTTTATCTGTGTCTCTCTGTGTGTTATTAGACTATT
ATCTTGCTATTGCTACTCTTAGTGCTACTTTTATTTCCCTGTTTCTATAC
TGTATTGTTCCTTCCTCGTGTTTTTGTGTGGTTATCGGTATACTACTTTA
CTACTACTACTTCCATTATCGCCTATCGTTCTCCTATTTCCATTGTACCC
CTACTACACTTTTTGACCACCTTCCTTCCCTTCTTTTTTTCCGACTACGC
AGCTATGCCTTATAATACACGTCGCAAGTCGCTGTCGCTCCCCTCCTTGG
GAATTCATCTCCCTAATACATCTCGCCGCTCCCCCTCCGCCACAAAATCG
CCTCACGCGACCGATGACCAGCTCCCTCCCTCCAAGAAAGTGAAGCGGTC
GCACGACTCGGCATACTCGCTATCTCCCGAGCCTTCCTCGTCTTCCTCTG
CGCGCACTCCCGATGGCAAGGAATCCGCCGCTCCTCTACGTCAGAGTGGG
CGGCGCGGGCCTTTGGAACATACGCCACCGCCATCCCCCACCGATGGTAC
TGTCGCGACTAAGATCGACACCGAGGGGATCAATGATGACATTGTGGTTG
GTGTGATTGAGCAGTTGGAAAAGACTGGAAACCGTCCTCATTTGGTTAAG
GAGTTGGCTGCCGTCCTTATCGCGTTGAACGAGAATGTCGCAAAGTACGT
TTCCCTCTTCTGATCTTCCCCCTCTCTATATGTCGCTGGCCATACTAATG
GGACATTTTGTCTTTACAGCTCTGCGAACCCTGCAGCTCTTTTGTCTTCT
CGGTTAAGTGCCTACATGAAGCGCCCGTGGACCGCCCTCGCGCCCTGTCC
TATAGCAAAGGAACTGGTCCCAATCCACCCGCGCAAAGTGTACTACTACC
TGACGACATTGCCCCGTCAGCCTCTCCCAGAGAACTCGGACGATGTTATC
ATTCCTGGGGTAGAGGGCAAGGATATCACTCCCAGCGTCTCCAGCGCCGA
TCTAGATGAGGAAGACGCGATGGCGCGGGAGCGGTCGCGCCTCAGCCCCA
GCCCAGAGGTGGATCTGTCGTCTCCTGACTTCGAGGAAGAGTCCATCGAC
TTGGACGGTCGCAATGGCCCCGTCGGTGCGTCAAGATCTGGCACCGACTT
CAACGACCATCACCACGCGCGTTTGATGCACTCCAACCGTGCTGCCTCCC
CGCCATTGGAGGGAGACGAGAAGGAATTCACACAAACTGCTAGCGCCGTG
CGCGAGCGGGCCTCGGAGCAAAAAGGAGGCCAGCTTCAGATTCCGGGAGG
TGGCTTTTCTGCCCTCTCGGAAGGCCTGAGCGAGTTGCATGATGGAGCGA
TGAGCATTTCTGATTCCGTCGAGGACAGCCCTCTCTCCTCCATTAGCGGT
GATCGCATGTCGGACGACCAGGATGGCGACTACTTCTCGCACAACGCATA
CCAGCAGCAGTCCCCTCTGCAAGATCATCTCCAGCAGCAGCAGGATTTCG
ATGACGCTGCTGTGGCCACTCTCTTCGGCACCTCTCCCTCCCCCTCCCTC
ACATCTGTTGCCTCATCCATCTCGTCTGGCACGAGCGTGGCTTCCGATGA
CGGGCTGGATGGCGAGACGCAACCCGAGACCGTCGGACGCACCCCTCAGA
TCAGCCTCCCAGAGGATCTGACCGTCCCCCCGGTATCGGCGCTCAAACGT
TCCATCGACATGCTGAACAGTGGGCTTCCTGACCTGGACATGAAGATGTC
CGATCTCAATGAGCAGGACGATAAACTGCCTCTGGGAGCCAGTGCCTTTG
CCAGCCAGGATGTCGAGATGGTCTTTGATTCGTGGCGAGAGCTGCAGAGT
CCCGAGACCGTGGAAGTTGATGAGCTGGACGAGATGTTCGGGGAAATCTG
AACGTCGTCGCCGCGGCACTTCTCATCCACCAACCGATAGACTAGAGGCG
TTTGGATCGTGTGTTCCTTTTCCGGGTGTCTACAACCAAACAGACTCCTT
CCATCTCCACTCCCGCTGTGGCCGGTCTGTTGAGCCGGCTACTCACCTAC
ACCACCTTGATACTCCGTTTGACCTAATCTTGTACAGTTCCTATTTGTTT
AATGCCCGTTTCGCATCTTGTTTTGACCGCCATTTTCGGCGAGGCTCTCG
CGCCTGCCGCGCCTGTACATATATACTCTTTACCTCTTTTCTTCCCTCCT
TCTCTGACCGTCTTGATTTTTTATTATATCCCCTGGCTGGCTGTGATGTA
TCTGATTGATCGTTTCCTGGGGGTTTGAATTTGCAAGTTCTTCTCAAATG
ATGGGCATGGAGAGACGGAGCCCGAAGCAGTTGATGATGAAAACGGCCGA
AGGAAGAAGAGGACCAGGGAGAAAGAAAAACTGGGATATGCTTGATGTCT
GACTATGTATGCTTAGCGCCTGTGGCCTTTGAATCCAAAAATTCCCCGCA
AGGGTTAGATCTGACGAGAACCGATGTGATTGTTCATTCTCTGTGCTTTG
TAGATGGGAGTAGCTCCTTGATCCTCGTATGCCTCTCGGTATAGTAAGCA
GTAGTTAGGTGAACGTCCGCTGTGTCTGATGGACGCACGGCCTCCCGCGC
CCTTGGAAATGTGGATGACCGGATCCTTCCTGGAATGTGGGGGAACTGGT
GTGACTGGTGTGACTGCAGGAACGAGGCATGCCAATGTAGCAGATCTGGT
AGAAAGCGAAACCGCCCGACCTATGAGAAGAGATG back to topCoding sequence (CDS) from alignment at ch5:2348125..2351359- >KJC3_007399-T1 ID=KJC3_007399-T1|Name=KJC3_007399-T1|organism=Aspergillus niger KJC3|type=CDS|length=3144bp|location=Sequence derived from alignment at ch5:2348125..2351359- (Aspergillus niger KJC3)
CTCTGCGAACCCTGCAGCTCTTTTGTCTTCTCGGTTAAGTGCCTACATGA
AGCGCCCGTGGACCGCCCTCGCGCCCTGTCCTATAGCAAAGGAACTGGTC
CCAATCCACCCGCGCAAAGTGTACTACTACCTGACGACATTGCCCCGTCA
GCCTCTCCCAGAGAACTCGGACGATGTTATCATTCCTGGGGTAGAGGGCA
AGGATATCACTCCCAGCGTCTCCAGCGCCGATCTAGATGAGGAAGACGCG
ATGGCGCGGGAGCGGTCGCGCCTCAGCCCCAGCCCAGAGGTGGATCTGTC
GTCTCCTGACTTCGAGGAAGAGTCCATCGACTTGGACGGTCGCAATGGCC
CCGTCGGTGCGTCAAGATCTGGCACCGACTTCAACGACCATCACCACGCG
CGTTTGATGCACTCCAACCGTGCTGCCTCCCCGCCATTGGAGGGAGACGA
GAAGGAATTCACACAAACTGCTAGCGCCGTGCGCGAGCGGGCCTCGGAGC
AAAAAGGAGGCCAGCTTCAGATTCCGGGAGGTGGCTTTTCTGCCCTCTCG
GAAGGCCTGAGCGAGTTGCATGATGGAGCGATGAGCATTTCTGATTCCGT
CGAGGACAGCCCTCTCTCCTCCATTAGCGGTGATCGCATGTCGGACGACC
AGGATGGCGACTACTTCTCGCACAACGCATACCAGCAGCAGTCCCCTCTG
CAAGATCATCTCCAGCAGCAGCAGGATTTCGATGACGCTGCTGTGGCCAC
TCTCTTCGGCACCTCTCCCTCCCCCTCCCTCACATCTGTTGCCTCATCCA
TCTCGTCTGGCACGAGCGTGGCTTCCGATGACGGGCTGGATGGCGAGACG
CAACCCGAGACCGTCGGACGCACCCCTCAGATCAGCCTCCCAGAGGATCT
GACCGTCCCCCCGGTATCGGCGCTCAAACGTTCCATCGACATGCTGAACA
GTGGGCTTCCTGACCTGGACATGAAGATGTCCGATCTCAATGAGCAGGAC
GATAAACTGCCTCTGGGAGCCAGTGCCTTTGCCAGCCAGGATGTCGAGAT
GGTCTTTGATTCGTGGCGAGAGCTGCAGAGTCCCGAGACCGTGGAAGTTG
ATGAGCTGGACGAGATGTTCGGGGAAATCTGAATGCCTTATAATACACGT
CGCAAGTCGCTGTCGCTCCCCTCCTTGGGAATTCATCTCCCTAATACATC
TCGCCGCTCCCCCTCCGCCACAAAATCGCCTCACGCGACCGATGACCAGC
TCCCTCCCTCCAAGAAAGTGAAGCGGTCGCACGACTCGGCATACTCGCTA
TCTCCCGAGCCTTCCTCGTCTTCCTCTGCGCGCACTCCCGATGGCAAGGA
ATCCGCCGCTCCTCTACGTCAGAGTGGGCGGCGCGGGCCTTTGGAACATA
CGCCACCGCCATCCCCCACCGATGGTACTGTCGCGACTAAGATCGACACC
GAGGGGATCAATGATGACATTGTGGTTGGTGTGATTGAGCAGTTGGAAAA
GACTGGAAACCGTCCTCATTTGGTTAAGGAGTTGGCTGCCGTCCTTATCG
CGTTGAACGAGAATGTCGCAAACTCTGCGAACCCTGCAGCTCTTTTGTCT
TCTCGGTTAAGTGCCTACATGAAGCGCCCGTGGACCGCCCTCGCGCCCTG
TCCTATAGCAAAGGAACTGGTCCCAATCCACCCGCGCAAAGTGTACTACT
ACCTGACGACATTGCCCCGTCAGCCTCTCCCAGAGAACTCGGACGATGTT
ATCATTCCTGGGGTAGAGGGCAAGGATATCACTCCCAGCGTCTCCAGCGC
CGATCTAGATGAGGAAGACGCGATGGCGCGGGAGCGGTCGCGCCTCAGCC
CCAGCCCAGAGGTGGATCTGTCGTCTCCTGACTTCGAGGAAGAGTCCATC
GACTTGGACGGTCGCAATGGCCCCGTCGGTGCGTCAAGATCTGGCACCGA
CTTCAACGACCATCACCACGCGCGTTTGATGCACTCCAACCGTGCTGCCT
CCCCGCCATTGGAGGGAGACGAGAAGGAATTCACACAAACTGCTAGCGCC
GTGCGCGAGCGGGCCTCGGAGCAAAAAGGAGGCCAGCTTCAGATTCCGGG
AGGTGGCTTTTCTGCCCTCTCGGAAGGCCTGAGCGAGTTGCATGATGGAG
CGATGAGCATTTCTGATTCCGTCGAGGACAGCCCTCTCTCCTCCATTAGC
GGTGATCGCATGTCGGACGACCAGGATGGCGACTACTTCTCGCACAACGC
ATACCAGCAGCAGTCCCCTCTGCAAGATCATCTCCAGCAGCAGCAGGATT
TCGATGACGCTGCTGTGGCCACTCTCTTCGGCACCTCTCCCTCCCCCTCC
CTCACATCTGTTGCCTCATCCATCTCGTCTGGCACGAGCGTGGCTTCCGA
TGACGGGCTGGATGGCGAGACGCAACCCGAGACCGTCGGACGCACCCCTC
AGATCAGCCTCCCAGAGGATCTGACCGTCCCCCCGGTATCGGCGCTCAAA
CGTTCCATCGACATGCTGAACAGTGGGCTTCCTGACCTGGACATGAAGAT
GTCCGATCTCAATGAGCAGGACGATAAACTGCCTCTGGGAGCCAGTGCCT
TTGCCAGCCAGGATGTCGAGATGGTCTTTGATTCGTGGCGAGAGCTGCAG
AGTCCCGAGACCGTGGAAGTTGATGAGCTGGACGAGATGTTCGGGGAAAT
CTGAATGCCTTATAATACACGTCGCAAGTCGCTGTCGCTCCCCTCCTTGG
GAATTCATCTCCCTAATACATCTCGCCGCTCCCCCTCCGCCACAAAATCG
CCTCACGCGACCGATGACCAGCTCCCTCCCTCCAAGAAAGTGAAGCGGTC
GCACGACTCGGCATACTCGCTATCTCCCGAGCCTTCCTCGTCTTCCTCTG
CGCGCACTCCCGATGGCAAGGAATCCGCCGCTCCTCTACGTCAGAGTGGG
CGGCGCGGGCCTTTGGAACATACGCCACCGCCATCCCCCACCGATGGTAC
TGTCGCGACTAAGATCGACACCGAGGGGATCAATGATGACATTGTGGTTG
GTGTGATTGAGCAGTTGGAAAAGACTGGAAACCGTCCTCATTTGGTTAAG
GAGTTGGCTGCCGTCCTTATCGCGTTGAACGAGAATGTCGCAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007399-T1.utr3p1 | KJC3_007399-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007399-T1.utr5p1 | KJC3_007399-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2348125..2351359 - |
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