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KJC3_007400-T1, KJC3_007400-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007400-T1
Unique NameKJC3_007400-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2355022..2356248-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007400-T1 ID=KJC3_007400-T1|Name=KJC3_007400-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1227bp|location=Sequence derived from alignment at ch5:2355022..2356248- (Aspergillus niger KJC3)
ATCTTATTCTACATCACTCCATTCGCCGCAAACATGAGCGCACCACGGGT
CGGGCGAGCAGCGCTGAAGAAGGCCAAGTTGCCTGCTTCTGCTTCTGCTT
CTGCTTCCAAGCCAGCGCCTCGATTCCCAGTGGCAGACGGCACCGGGTTA
GTCTCATTGGCTCCGCATCACACCTGTTGACGCCTACTGACTTACTGTAA
TGTGCAGACCCAAAACCCTCCCTAAACGTGCCAACCAACACCTCAAGGAT
CTCCCTTCCACGCCCCCGTCCGCCCCCGTATCGCCCAGAGTCATGACCAT
CTTCGGCGTCAGCGCCCTCACTCTCAGCACCTACATCGGCTACCTCTACG
CCTCGTACCGTCGCGAAGTCACTCAATCGCAATCCCTCTCTGTCCCCCAC
GATGTTTCCGACCGTTACAACCACACAGCACGCACCTTCGACGCAGACGT
CGAAATGTCCGAGAAAGTCATGCGCATGGGCTCCAAACGCGCAGACCTGA
TCAGTCGCGCACGCGGCGACGTCCTCGAAGTCAGCTGCGGTACCGGCCGA
AACCTCCAGTATTATGAACTCGGGCAGCGGAGGGGACTGGATAGCAAGGG
ACGCGCAGGCATGCATGGATGTCGGTCCGTAACATTTGTGGATTTGAGTC
CGGAGATGGTGGAGATTACGAAGGCCAAGTTTGCGAAACAGTTCCCGGAG
CATGAGGTGCCGGTGAATTTCGAAGTACAGGATGCCGCAGGCGTGCCTAG
GCGTCCGGTTGATCCGTCACGGAAGGGTGATGAGGGTTATTATGATACGG
TGGTGCAGACCATGGGGCTTTGTTCGATGCCGGATCCCGTGGGCACGTTG
CGCCATCTGGGGACGGTTGTTGAGCCGAATAAGGGAGAGATCTTGTTGTT
GGAGCACGGGCGGTCCCACTATGATTGGCTCAACCGCATCTTGGATAATT
TGGCGTCGGCGCATGCGGATAGGCATGGGTGTTGGTGGAATCGGGATATT
GGGAAGATCGTGCGGGATAGTGGGTTGGAGGTGGTGGAGGAGAAACGCTG
GCATTTTGGGACGACGTGGAAGTATGTCTTGCGGCCGGCGAGGACGGAGA
AGTGATGGTGTCGAGGATGTCACTTGTATATTAGCTAGTTCATGATAGAC
TTGGATGACTGGATGTATTTGTAAATATGCATGGCGGGTATTATAATTAT
CACTATATAATAGACAGTTTGGGTCAC
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Coding sequence (CDS) from alignment at ch5:2355022..2356248-

>KJC3_007400-T1 ID=KJC3_007400-T1|Name=KJC3_007400-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch5:2355022..2356248- (Aspergillus niger KJC3)
ACCCAAAACCCTCCCTAAACGTGCCAACCAACACCTCAAGGATCTCCCTT
CCACGCCCCCGTCCGCCCCCGTATCGCCCAGAGTCATGACCATCTTCGGC
GTCAGCGCCCTCACTCTCAGCACCTACATCGGCTACCTCTACGCCTCGTA
CCGTCGCGAAGTCACTCAATCGCAATCCCTCTCTGTCCCCCACGATGTTT
CCGACCGTTACAACCACACAGCACGCACCTTCGACGCAGACGTCGAAATG
TCCGAGAAAGTCATGCGCATGGGCTCCAAACGCGCAGACCTGATCAGTCG
CGCACGCGGCGACGTCCTCGAAGTCAGCTGCGGTACCGGCCGAAACCTCC
AGTATTATGAACTCGGGCAGCGGAGGGGACTGGATAGCAAGGGACGCGCA
GGCATGCATGGATGTCGGTCCGTAACATTTGTGGATTTGAGTCCGGAGAT
GGTGGAGATTACGAAGGCCAAGTTTGCGAAACAGTTCCCGGAGCATGAGG
TGCCGGTGAATTTCGAAGTACAGGATGCCGCAGGCGTGCCTAGGCGTCCG
GTTGATCCGTCACGGAAGGGTGATGAGGGTTATTATGATACGGTGGTGCA
GACCATGGGGCTTTGTTCGATGCCGGATCCCGTGGGCACGTTGCGCCATC
TGGGGACGGTTGTTGAGCCGAATAAGGGAGAGATCTTGTTGTTGGAGCAC
GGGCGGTCCCACTATGATTGGCTCAACCGCATCTTGGATAATTTGGCGTC
GGCGCATGCGGATAGGCATGGGTGTTGGTGGAATCGGGATATTGGGAAGA
TCGTGCGGGATAGTGGGTTGGAGGTGGTGGAGGAGAAACGCTGGCATTTT
GGGACGACGTGGAAGTATGTCTTGCGGCCGGCGAGGACGGAGAAGTGAAT
GAGCGCACCACGGGTCGGGCGAGCAGCGCTGAAGAAGGCCAAGTTGCCTG
CTTCTGCTTCTGCTTCTGCTTCCAAGCCAGCGCCTCGATTCCCAGTGGCA
GACGGCACCGGACCCAAAACCCTCCCTAAACGTGCCAACCAACACCTCAA
GGATCTCCCTTCCACGCCCCCGTCCGCCCCCGTATCGCCCAGAGTCATGA
CCATCTTCGGCGTCAGCGCCCTCACTCTCAGCACCTACATCGGCTACCTC
TACGCCTCGTACCGTCGCGAAGTCACTCAATCGCAATCCCTCTCTGTCCC
CCACGATGTTTCCGACCGTTACAACCACACAGCACGCACCTTCGACGCAG
ACGTCGAAATGTCCGAGAAAGTCATGCGCATGGGCTCCAAACGCGCAGAC
CTGATCAGTCGCGCACGCGGCGACGTCCTCGAAGTCAGCTGCGGTACCGG
CCGAAACCTCCAGTATTATGAACTCGGGCAGCGGAGGGGACTGGATAGCA
AGGGACGCGCAGGCATGCATGGATGTCGGTCCGTAACATTTGTGGATTTG
AGTCCGGAGATGGTGGAGATTACGAAGGCCAAGTTTGCGAAACAGTTCCC
GGAGCATGAGGTGCCGGTGAATTTCGAAGTACAGGATGCCGCAGGCGTGC
CTAGGCGTCCGGTTGATCCGTCACGGAAGGGTGATGAGGGTTATTATGAT
ACGGTGGTGCAGACCATGGGGCTTTGTTCGATGCCGGATCCCGTGGGCAC
GTTGCGCCATCTGGGGACGGTTGTTGAGCCGAATAAGGGAGAGATCTTGT
TGTTGGAGCACGGGCGGTCCCACTATGATTGGCTCAACCGCATCTTGGAT
AATTTGGCGTCGGCGCATGCGGATAGGCATGGGTGTTGGTGGAATCGGGA
TATTGGGAAGATCGTGCGGGATAGTGGGTTGGAGGTGGTGGAGGAGAAAC
GCTGGCATTTTGGGACGACGTGGAAGTATGTCTTGCGGCCGGCGAGGACG
GAGAAGTGAATGAGCGCACCACGGGTCGGGCGAGCAGCGCTGAAGAAGGC
CAAGTTGCCTGCTTCTGCTTCTGCTTCTGCTTCCAAGCCAGCGCCTCGAT
TCCCAGTGGCAGACGGCACCGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007400KJC3_007400Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007400-T1KJC3_007400-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007400-T1.cdsKJC3_007400-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007400-T1.utr3p1KJC3_007400-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007400-T1.exon2KJC3_007400-T1.exon2Aspergillus niger KJC3exon
KJC3_007400-T1.exon1KJC3_007400-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007400-T1.utr5p1KJC3_007400-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2355022..2356248 -
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