You are here

Home

KJC3_007403-T1, KJC3_007403-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007403-T1
Unique NameKJC3_007403-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2364095..2365153-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007403-T1 ID=KJC3_007403-T1|Name=KJC3_007403-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1059bp|location=Sequence derived from alignment at ch5:2364095..2365153- (Aspergillus niger KJC3)
CCGAACCTTCACGAAACCAACTCAAGAAAGAATCTTAATCATCAAAATGG
CGCGACACAGTTATAAAAGGCGCGCATCCGTCTCTGAGTCCCAAAACGTA
GCTATCAGGCCTACTACGACCAAACTCACCATCACCATCATCATACTACA
ACAACAGATCAACCACTCCTCAACAGCAAACATGGTCTCCAGTTCTTCAA
CCAGCATGCCATCAACTCGCACCATTACCACTCCTTCTCCAACCGACGAC
GATGAAGACGTAGAAGTGGTGTACACCCCCTCCACTTCTTCTACTTCCTC
CTCATCCCCTTCATCCATCCGCCTGACGGCCGCCGGAAAATGCAAAGCGG
AACTCAAATCCGGCAATATAGGCCTAGAATGTCCCTGCAACAGGGGCGTT
TTCCTTCTCTCGCACACAAACGATTTCGGAGATAAATGCGTCGAGTGCGA
GCACACCATGGCACATCACAAGGGCGCTGGATCCCAGCGAAAAGGCATTT
CCTTCCCCATCCCTTCCCCTCCCCCTCTATCTCTACAACCCACACCCACA
TCCAACCTCCACCAACAATAACAATAAATAATATATAGTAGAAGAACCCC
CCAACCCCCGCCACACCACCCTCACCAAACTCATGAACCTAATGGACCTC
TACCCCCTCCTCTACGTCCGCGGCATCCCCGACAGCGGTAAAGGAACCGT
GAGCCAATTCCGGCGCGATAATTTCATGCTGATGACTCGCGAGCAAGAAG
CGCATAGTTTCTTTCTTCCTGTGGATAAACCGCTTGAGGAGTTCGACTCT
GAGGAAGATCTCCTCAAGCAGGTTGTTAATTCGTTTAATCGGCTATGTAA
AGAACCGCGGTTCTTTTTCCTGGTGCTTTATTTTCTGACCCTGTCGGCGT
TTATGGGGGTTCGGTTTCTTGAACTGGTGGTTTTGCCGTATTTGCCGGCT
CCGGGGAAGGGGATGAGGGGGTTGAGATAGGAGTCTGGATTGGTATTTTG
GCTTCTAGGATAAGTGAGAGAATGTATTGAATGTATGCTCTATAGGAGTG
GGTGTTAAG
back to top

Coding sequence (CDS) from alignment at ch5:2364095..2365153-

>KJC3_007403-T1 ID=KJC3_007403-T1|Name=KJC3_007403-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch5:2364095..2365153- (Aspergillus niger KJC3)
TAGAAGAACCCCCCAACCCCCGCCACACCACCCTCACCAAACTCATGAAC
CTAATGGACCTCTACCCCCTCCTCTACGTCCGCGGCATCCCCGACAGCGG
TAAAGGAACCGTGAGCCAATTCCGGCGCGATAATTTCATGCTGATGACTC
GCGAGCAAGAAGCGCATAGTTTCTTTCTTCCTGTGGATAAACCGCTTGAG
GAGTTCGACTCTGAGGAAGATCTCCTCAAGCAGGTTGTTAATTCGTTTAA
TCGGCTATGTAAAGAACCGCGGTTCTTTTTCCTGGTGCTTTATTTTCTGA
CCCTGTCGGCGTTTATGGGGGTTCGGTTTCTTGAACTGGTGGTTTTGCCG
TATTTGCCGGCTCCGGGGAAGGGGATGAGGGGGTTGAGATAGATGGCGCG
ACACAGTTATAAAAGGCGCGCATCCGTCTCTGAGTCCCAAAACGTAGCTA
TCAGGCCTACTACGACCAAACTCACCATCACCATCATCATACTACAACAA
CAGATCAACCACTCCTCAACAGCAAACATGGTCTCCAGTTCTTCAACCAG
CATGCCATCAACTCGCACCATTACCACTCCTTCTCCAACCGACGACGATG
AAGACGTAGAAGTGGTGTACACCCCCTCCACTTCTTCTACTTCCTCCTCA
TCCCCTTCATCCATCCGCCTGACGGCCGCCGGAAAATGCAAAGCGGAACT
CAAATCCGGCAATATAGGCCTAGAATGTCCCTGCAACAGGGGCGTTTTCC
TTCTCTCGCACACAAACGATTTCGGAGATAAATGCGTCGAGTGCGAGCAC
ACCATGGCACATCACAAGGGCGCTGGATCCCAGCGAAAAGTAGAAGAACC
CCCCAACCCCCGCCACACCACCCTCACCAAACTCATGAACCTAATGGACC
TCTACCCCCTCCTCTACGTCCGCGGCATCCCCGACAGCGGTAAAGGAACC
GTGAGCCAATTCCGGCGCGATAATTTCATGCTGATGACTCGCGAGCAAGA
AGCGCATAGTTTCTTTCTTCCTGTGGATAAACCGCTTGAGGAGTTCGACT
CTGAGGAAGATCTCCTCAAGCAGGTTGTTAATTCGTTTAATCGGCTATGT
AAAGAACCGCGGTTCTTTTTCCTGGTGCTTTATTTTCTGACCCTGTCGGC
GTTTATGGGGGTTCGGTTTCTTGAACTGGTGGTTTTGCCGTATTTGCCGG
CTCCGGGGAAGGGGATGAGGGGGTTGAGATAGATGGCGCGACACAGTTAT
AAAAGGCGCGCATCCGTCTCTGAGTCCCAAAACGTAGCTATCAGGCCTAC
TACGACCAAACTCACCATCACCATCATCATACTACAACAACAGATCAACC
ACTCCTCAACAGCAAACATGGTCTCCAGTTCTTCAACCAGCATGCCATCA
ACTCGCACCATTACCACTCCTTCTCCAACCGACGACGATGAAGACGTAGA
AGTGGTGTACACCCCCTCCACTTCTTCTACTTCCTCCTCATCCCCTTCAT
CCATCCGCCTGACGGCCGCCGGAAAATGCAAAGCGGAACTCAAATCCGGC
AATATAGGCCTAGAATGTCCCTGCAACAGGGGCGTTTTCCTTCTCTCGCA
CACAAACGATTTCGGAGATAAATGCGTCGAGTGCGAGCACACCATGGCAC
ATCACAAGGGCGCTGGATCCCAGCGAAAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007403KJC3_007403Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007403-T1KJC3_007403-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007403-T1.cdsKJC3_007403-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007403-T1.utr3p1KJC3_007403-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007403-T1.exon2KJC3_007403-T1.exon2Aspergillus niger KJC3exon
KJC3_007403-T1.exon1KJC3_007403-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007403-T1.utr5p1KJC3_007403-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2364095..2365153 -
Powered by Drupal