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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2365506..2368104- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007404-T1 ID=KJC3_007404-T1|Name=KJC3_007404-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2599bp|location=Sequence derived from alignment at ch5:2365506..2368104- (Aspergillus niger KJC3)
AAATTTTATCCCACGGCCGCCATATTATTAGTCACGCCTTCATTGCCGGT
GACGGAGAGGGGACTTGCCTACTTACTCTTCTGATCTGGATTCCACGCTT
GAAGTTGTTTCTTCCTACTCCTTTCAACATCATCCCGCTCGGATTCATTT
CTGCGCCCTCTTCGTTCGCCACTCCTTCCCCCATTGCTTGCTCCCATCCT
ACCATGCAGTTGTCTCGTTTATAGGAGCTCCCCATCCAAGCAACGATACT
GTGACCTCTCCAACCTTGCTTCCTTCCTGAACCCCCGCCATGGCTTCGAA
AGGAGCTGTCTTGCCTCTTCTGAGGCGCGAATTGCGACCCACTTGGTCGC
GACTCTCCAGATCTTCCGCCTCTCTCGCCCCCTTCAACAACTCCGCTCGA
ATCTCGAACAGTTCCCTCGCAGCGTCCGGCAAGCGTGCCATTCGTCGCAC
ATCGTTCTTCCCGCCAATCCAGACTCGAGCCTTTTCGCAATCACTATCTC
GAAAGCTGACCGATGAGCATGGCAATTTTGATCCGCGACAGTTGGACCGG
GAGTCGGATGAGGTCGATGTTTGTATCGTCGGTGGTGGTATGTAGAATGA
CCCGGGCCTCTCTCCTTTGGCGGTTAGAGGTACGGCACAGGATTCAGTGA
CTAACCGACTGTCTTTATCACAAATTAGGCCCTGCTGGTCTGGCTGCTGC
CATTCGATTGAAGCAACTCGCCAACGAAGCCGGCAACGAGGAGTTCCGTG
TCATTGTGCTGGAAAAGGCCGGTGAACTTGGCGCGCACGTCCTTTCGGGT
AACGTCCTAGAGCCTACCGCCATGAACGAGCTGTTGCCAGATTGGCTGTC
GGAAGACAATCCGTCTCGCTTCGAGAATGTGACACCGGCGAAGGAGGATA
AGATGCGCTTTTTGACTAAGAACTCGTCCATTCCGATCCCTGCGCCGCCA
CAGATGAACAACCACGGCAACTACATTATCAGTCTGAACGAGCTCACGAA
ATGGATGGGAGAAAGAGCTGAGGAACTGGGTGTTGAAGTATACCCCGGTT
TTGCGGCCAGTGAACTCGTCTACAAGAAGTCGGATGGCTCGGTTCTCGGT
GTAGCCACCAATGATTTGGGAGTCGGTCGCGACGGCAAGGCCAAGGACAG
CTTTGAGCGGGGAATGGAGTTCCACGCCCGCGTTACCCTTCTTGCTGAGG
GTTGCCATGGTAGTTTGACGAAGCAGGTGATCAAGAAGTACGACCTGAGA
CGCGATAGCCAGCCCCAAACCTACGGTATTGGTGTGAAGGAGATTTGGGA
GATTCAACCCGAGAAGTTCAGACCCGGTGAGATCACGCACTCCTTGGGCT
ACCCCCTTCCCAGCGACACCTATGGCGGTGCGTGGATGTACCATTTTGGC
GACAACATGGTTAGCATTGGCTTGGTAGTCGGGTTGGACTACCCGAACCC
CTGGCTGTCGCCCTATGGCGAGTTCCAGAAGCTCAAGCACCACCCTCTTT
ACAAGGAAGTCCTGGAAGGTGGAAAGTGCATCTCCTACGGCGCGCGGGCT
TTGAATGAGGGCGGATTCCAGTCGATCCCGAAGTGCGCTTTCCCGGGAGG
AGCCCTGATTGGCGATAGTGCCGGTTTCTTGAACGTTCCGAAGATCAAGG
GTACCCATTCTGCGATGAAGTCGGCCATGCTTGCTGCTGAGTCCGCTTAT
GCAGCCCTGCAGGGAAGCTCGGAAGGCTCTGTATTCTTGTTCGACTACGA
AGAAGCTCTGCGCAAGTCGTCCATCTGGAAGGAGCTGTACGAGGTGCGTA
ACATGCGGCCCTCTTTCAGCACGCCACTGGGTCTCTACGGCGGTATCCTG
TACTCTGGTCTTGAAGCGTACGTTCTCAAGGGCAAGGCTCCCTGGACTTT
GAAGCACCACGGCACGGATGCTGCTGCGACCAAGATGGCGTCTGAATGCA
ACAAGATCGAGTACCCCAAGCCGGACGGAGTGATCAGCTTCGACATCCTC
ACCAGCGTCAGCCGCACGGGTACCAACCACGAGGAAGACCAGCCGGTGCA
TTTGCAGGTGGAAGACTGGGACAAGCACACCGATGTTGCCTGGCCCAAGT
ACCAGGGTGTCGAGAACCGTTTCTGCCCTGCCGGTGTGTATGAGTACGTG
GAGGATGCTAGCAAGCCTCACGGCGTTCGCTTCCAGATCAACTCTCAGAA
GTAAGTCAACCCTACATGCTCCTACTGTTTCTCTTGCTAACTGGTCATAG
CTGCATTCACTGCAAGACCTGTGATATCAAGGTGCCTACCCAGGATATCA
ACTGGCAGACTCCTCAAGGTGGAGAGGGCCCGAAGTACTTTATGACTTAG
GCCTAGAGTTCTTTCCACACTTACATATTTGTCTTCGCCCTTCATCAGGG
TACAAAAAGGATTGGATGGATAAGAGTATCCATTGTGGCGTTGGTTATTA
ATGTTTGATCATGTTTCATTTCCAGGCCGGTGGATGCCTGTTACGTATTG
CGCGTTGAGCCCGGATAGGGCCTTGTATATATATAGTTGTACTCCATAGT
CTGCGGTGACGATGAATTACTGAGTATACCGTTCACTCGGGATATAAAA back to topCoding sequence (CDS) from alignment at ch5:2365506..2368104- >KJC3_007404-T1 ID=KJC3_007404-T1|Name=KJC3_007404-T1|organism=Aspergillus niger KJC3|type=CDS|length=5760bp|location=Sequence derived from alignment at ch5:2365506..2368104- (Aspergillus niger KJC3)
CTGCATTCACTGCAAGACCTGTGATATCAAGGTGCCTACCCAGGATATCA
ACTGGCAGACTCCTCAAGGTGGAGAGGGCCCGAAGTACTTTATGACTTAG
GCCCTGCTGGTCTGGCTGCTGCCATTCGATTGAAGCAACTCGCCAACGAA
GCCGGCAACGAGGAGTTCCGTGTCATTGTGCTGGAAAAGGCCGGTGAACT
TGGCGCGCACGTCCTTTCGGGTAACGTCCTAGAGCCTACCGCCATGAACG
AGCTGTTGCCAGATTGGCTGTCGGAAGACAATCCGTCTCGCTTCGAGAAT
GTGACACCGGCGAAGGAGGATAAGATGCGCTTTTTGACTAAGAACTCGTC
CATTCCGATCCCTGCGCCGCCACAGATGAACAACCACGGCAACTACATTA
TCAGTCTGAACGAGCTCACGAAATGGATGGGAGAAAGAGCTGAGGAACTG
GGTGTTGAAGTATACCCCGGTTTTGCGGCCAGTGAACTCGTCTACAAGAA
GTCGGATGGCTCGGTTCTCGGTGTAGCCACCAATGATTTGGGAGTCGGTC
GCGACGGCAAGGCCAAGGACAGCTTTGAGCGGGGAATGGAGTTCCACGCC
CGCGTTACCCTTCTTGCTGAGGGTTGCCATGGTAGTTTGACGAAGCAGGT
GATCAAGAAGTACGACCTGAGACGCGATAGCCAGCCCCAAACCTACGGTA
TTGGTGTGAAGGAGATTTGGGAGATTCAACCCGAGAAGTTCAGACCCGGT
GAGATCACGCACTCCTTGGGCTACCCCCTTCCCAGCGACACCTATGGCGG
TGCGTGGATGTACCATTTTGGCGACAACATGGTTAGCATTGGCTTGGTAG
TCGGGTTGGACTACCCGAACCCCTGGCTGTCGCCCTATGGCGAGTTCCAG
AAGCTCAAGCACCACCCTCTTTACAAGGAAGTCCTGGAAGGTGGAAAGTG
CATCTCCTACGGCGCGCGGGCTTTGAATGAGGGCGGATTCCAGTCGATCC
CGAAGTGCGCTTTCCCGGGAGGAGCCCTGATTGGCGATAGTGCCGGTTTC
TTGAACGTTCCGAAGATCAAGGGTACCCATTCTGCGATGAAGTCGGCCAT
GCTTGCTGCTGAGTCCGCTTATGCAGCCCTGCAGGGAAGCTCGGAAGGCT
CTGTATTCTTGTTCGACTACGAAGAAGCTCTGCGCAAGTCGTCCATCTGG
AAGGAGCTGTACGAGGTGCGTAACATGCGGCCCTCTTTCAGCACGCCACT
GGGTCTCTACGGCGGTATCCTGTACTCTGGTCTTGAAGCGTACGTTCTCA
AGGGCAAGGCTCCCTGGACTTTGAAGCACCACGGCACGGATGCTGCTGCG
ACCAAGATGGCGTCTGAATGCAACAAGATCGAGTACCCCAAGCCGGACGG
AGTGATCAGCTTCGACATCCTCACCAGCGTCAGCCGCACGGGTACCAACC
ACGAGGAAGACCAGCCGGTGCATTTGCAGGTGGAAGACTGGGACAAGCAC
ACCGATGTTGCCTGGCCCAAGTACCAGGGTGTCGAGAACCGTTTCTGCCC
TGCCGGTGTGTATGAGTACGTGGAGGATGCTAGCAAGCCTCACGGCGTTC
GCTTCCAGATCAACTCTCAGAAATGGCTTCGAAAGGAGCTGTCTTGCCTC
TTCTGAGGCGCGAATTGCGACCCACTTGGTCGCGACTCTCCAGATCTTCC
GCCTCTCTCGCCCCCTTCAACAACTCCGCTCGAATCTCGAACAGTTCCCT
CGCAGCGTCCGGCAAGCGTGCCATTCGTCGCACATCGTTCTTCCCGCCAA
TCCAGACTCGAGCCTTTTCGCAATCACTATCTCGAAAGCTGACCGATGAG
CATGGCAATTTTGATCCGCGACAGTTGGACCGGGAGTCGGATGAGGTCGA
TGTTTGTATCGTCGGTGGTGCTGCATTCACTGCAAGACCTGTGATATCAA
GGTGCCTACCCAGGATATCAACTGGCAGACTCCTCAAGGTGGAGAGGGCC
CGAAGTACTTTATGACTTAGGCCCTGCTGGTCTGGCTGCTGCCATTCGAT
TGAAGCAACTCGCCAACGAAGCCGGCAACGAGGAGTTCCGTGTCATTGTG
CTGGAAAAGGCCGGTGAACTTGGCGCGCACGTCCTTTCGGGTAACGTCCT
AGAGCCTACCGCCATGAACGAGCTGTTGCCAGATTGGCTGTCGGAAGACA
ATCCGTCTCGCTTCGAGAATGTGACACCGGCGAAGGAGGATAAGATGCGC
TTTTTGACTAAGAACTCGTCCATTCCGATCCCTGCGCCGCCACAGATGAA
CAACCACGGCAACTACATTATCAGTCTGAACGAGCTCACGAAATGGATGG
GAGAAAGAGCTGAGGAACTGGGTGTTGAAGTATACCCCGGTTTTGCGGCC
AGTGAACTCGTCTACAAGAAGTCGGATGGCTCGGTTCTCGGTGTAGCCAC
CAATGATTTGGGAGTCGGTCGCGACGGCAAGGCCAAGGACAGCTTTGAGC
GGGGAATGGAGTTCCACGCCCGCGTTACCCTTCTTGCTGAGGGTTGCCAT
GGTAGTTTGACGAAGCAGGTGATCAAGAAGTACGACCTGAGACGCGATAG
CCAGCCCCAAACCTACGGTATTGGTGTGAAGGAGATTTGGGAGATTCAAC
CCGAGAAGTTCAGACCCGGTGAGATCACGCACTCCTTGGGCTACCCCCTT
CCCAGCGACACCTATGGCGGTGCGTGGATGTACCATTTTGGCGACAACAT
GGTTAGCATTGGCTTGGTAGTCGGGTTGGACTACCCGAACCCCTGGCTGT
CGCCCTATGGCGAGTTCCAGAAGCTCAAGCACCACCCTCTTTACAAGGAA
GTCCTGGAAGGTGGAAAGTGCATCTCCTACGGCGCGCGGGCTTTGAATGA
GGGCGGATTCCAGTCGATCCCGAAGTGCGCTTTCCCGGGAGGAGCCCTGA
TTGGCGATAGTGCCGGTTTCTTGAACGTTCCGAAGATCAAGGGTACCCAT
TCTGCGATGAAGTCGGCCATGCTTGCTGCTGAGTCCGCTTATGCAGCCCT
GCAGGGAAGCTCGGAAGGCTCTGTATTCTTGTTCGACTACGAAGAAGCTC
TGCGCAAGTCGTCCATCTGGAAGGAGCTGTACGAGGTGCGTAACATGCGG
CCCTCTTTCAGCACGCCACTGGGTCTCTACGGCGGTATCCTGTACTCTGG
TCTTGAAGCGTACGTTCTCAAGGGCAAGGCTCCCTGGACTTTGAAGCACC
ACGGCACGGATGCTGCTGCGACCAAGATGGCGTCTGAATGCAACAAGATC
GAGTACCCCAAGCCGGACGGAGTGATCAGCTTCGACATCCTCACCAGCGT
CAGCCGCACGGGTACCAACCACGAGGAAGACCAGCCGGTGCATTTGCAGG
TGGAAGACTGGGACAAGCACACCGATGTTGCCTGGCCCAAGTACCAGGGT
GTCGAGAACCGTTTCTGCCCTGCCGGTGTGTATGAGTACGTGGAGGATGC
TAGCAAGCCTCACGGCGTTCGCTTCCAGATCAACTCTCAGAAATGGCTTC
GAAAGGAGCTGTCTTGCCTCTTCTGAGGCGCGAATTGCGACCCACTTGGT
CGCGACTCTCCAGATCTTCCGCCTCTCTCGCCCCCTTCAACAACTCCGCT
CGAATCTCGAACAGTTCCCTCGCAGCGTCCGGCAAGCGTGCCATTCGTCG
CACATCGTTCTTCCCGCCAATCCAGACTCGAGCCTTTTCGCAATCACTAT
CTCGAAAGCTGACCGATGAGCATGGCAATTTTGATCCGCGACAGTTGGAC
CGGGAGTCGGATGAGGTCGATGTTTGTATCGTCGGTGGTGCTGCATTCAC
TGCAAGACCTGTGATATCAAGGTGCCTACCCAGGATATCAACTGGCAGAC
TCCTCAAGGTGGAGAGGGCCCGAAGTACTTTATGACTTAGGCCCTGCTGG
TCTGGCTGCTGCCATTCGATTGAAGCAACTCGCCAACGAAGCCGGCAACG
AGGAGTTCCGTGTCATTGTGCTGGAAAAGGCCGGTGAACTTGGCGCGCAC
GTCCTTTCGGGTAACGTCCTAGAGCCTACCGCCATGAACGAGCTGTTGCC
AGATTGGCTGTCGGAAGACAATCCGTCTCGCTTCGAGAATGTGACACCGG
CGAAGGAGGATAAGATGCGCTTTTTGACTAAGAACTCGTCCATTCCGATC
CCTGCGCCGCCACAGATGAACAACCACGGCAACTACATTATCAGTCTGAA
CGAGCTCACGAAATGGATGGGAGAAAGAGCTGAGGAACTGGGTGTTGAAG
TATACCCCGGTTTTGCGGCCAGTGAACTCGTCTACAAGAAGTCGGATGGC
TCGGTTCTCGGTGTAGCCACCAATGATTTGGGAGTCGGTCGCGACGGCAA
GGCCAAGGACAGCTTTGAGCGGGGAATGGAGTTCCACGCCCGCGTTACCC
TTCTTGCTGAGGGTTGCCATGGTAGTTTGACGAAGCAGGTGATCAAGAAG
TACGACCTGAGACGCGATAGCCAGCCCCAAACCTACGGTATTGGTGTGAA
GGAGATTTGGGAGATTCAACCCGAGAAGTTCAGACCCGGTGAGATCACGC
ACTCCTTGGGCTACCCCCTTCCCAGCGACACCTATGGCGGTGCGTGGATG
TACCATTTTGGCGACAACATGGTTAGCATTGGCTTGGTAGTCGGGTTGGA
CTACCCGAACCCCTGGCTGTCGCCCTATGGCGAGTTCCAGAAGCTCAAGC
ACCACCCTCTTTACAAGGAAGTCCTGGAAGGTGGAAAGTGCATCTCCTAC
GGCGCGCGGGCTTTGAATGAGGGCGGATTCCAGTCGATCCCGAAGTGCGC
TTTCCCGGGAGGAGCCCTGATTGGCGATAGTGCCGGTTTCTTGAACGTTC
CGAAGATCAAGGGTACCCATTCTGCGATGAAGTCGGCCATGCTTGCTGCT
GAGTCCGCTTATGCAGCCCTGCAGGGAAGCTCGGAAGGCTCTGTATTCTT
GTTCGACTACGAAGAAGCTCTGCGCAAGTCGTCCATCTGGAAGGAGCTGT
ACGAGGTGCGTAACATGCGGCCCTCTTTCAGCACGCCACTGGGTCTCTAC
GGCGGTATCCTGTACTCTGGTCTTGAAGCGTACGTTCTCAAGGGCAAGGC
TCCCTGGACTTTGAAGCACCACGGCACGGATGCTGCTGCGACCAAGATGG
CGTCTGAATGCAACAAGATCGAGTACCCCAAGCCGGACGGAGTGATCAGC
TTCGACATCCTCACCAGCGTCAGCCGCACGGGTACCAACCACGAGGAAGA
CCAGCCGGTGCATTTGCAGGTGGAAGACTGGGACAAGCACACCGATGTTG
CCTGGCCCAAGTACCAGGGTGTCGAGAACCGTTTCTGCCCTGCCGGTGTG
TATGAGTACGTGGAGGATGCTAGCAAGCCTCACGGCGTTCGCTTCCAGAT
CAACTCTCAGAAATGGCTTCGAAAGGAGCTGTCTTGCCTCTTCTGAGGCG
CGAATTGCGACCCACTTGGTCGCGACTCTCCAGATCTTCCGCCTCTCTCG
CCCCCTTCAACAACTCCGCTCGAATCTCGAACAGTTCCCTCGCAGCGTCC
GGCAAGCGTGCCATTCGTCGCACATCGTTCTTCCCGCCAATCCAGACTCG
AGCCTTTTCGCAATCACTATCTCGAAAGCTGACCGATGAGCATGGCAATT
TTGATCCGCGACAGTTGGACCGGGAGTCGGATGAGGTCGATGTTTGTATC
GTCGGTGGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007404-T1.utr3p1 | KJC3_007404-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007404-T1.utr5p1 | KJC3_007404-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619EA |
| DBxref | InterPro:IPR017896 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13450 |
| DBxref | PFAM:PF05187 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2365506..2368104 - |
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