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KJC3_007436-T1, KJC3_007436-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007436-T1
Unique NameKJC3_007436-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2462507..2462924+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007436-T1 ID=KJC3_007436-T1|Name=KJC3_007436-T1|organism=Aspergillus niger KJC3|type=mRNA|length=418bp|location=Sequence derived from alignment at ch5:2462507..2462924+ (Aspergillus niger KJC3)
ATGTCCGCGTCAATCGCCCCCGAGTGCAACGATATCAAAGAGTACGAATC
ATTCACGAGCATACCTCAACACACATCTCAAACTCAACTAACACTTTGAC
TAGAAAATATGATACATGCTTCCTGAAATGGTACAGCGAAAGTAAGGCTC
ATACTTCATACCCCAGATAAGCGTATAACTCATCAAAGATCCGCAGAATA
CCTCCGTGGCAACACCGCTTCCAATGATTGCGACGAGCTTTTCAAAAAGT
ACAGGGCTTGTCTGAATGTATGACCCTGTTCAAAGCGGCCCCCAAACAAG
TTACCTGGCTAATTTTGTCTAAAAGCTCGCACTGAAAGAACGAGGTATCG
ACACGATGCTCGATGATGCTCGTAAGAGCACGAAGGACAGCGAAGCTGAA
TACATGCGGAAAAGCTGA
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Coding sequence (CDS) from alignment at ch5:2462507..2462924+

>KJC3_007436-T1 ID=KJC3_007436-T1|Name=KJC3_007436-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch5:2462507..2462924+ (Aspergillus niger KJC3)
ATGTCCGCGTCAATCGCCCCCGAGTGCAACGATATCAAAGAAAAATATGA
TACATGCTTCCTGAAATGGTACAGCGAAAAATACCTCCGTGGCAACACCG
CTTCCAATGATTGCGACGAGCTTTTCAAAAAGTACAGGGCTTGTCTGAAT
CTCGCACTGAAAGAACGAGGTATCGACACGATGCTCGATGATGCTCGTAA
GAGCACGAAGGACAGCGAAGCTGAATACATGCGGAAAAGCTGAATGTCCG
CGTCAATCGCCCCCGAGTGCAACGATATCAAAGAAAAATATGATACATGC
TTCCTGAAATGGTACAGCGAAAAATACCTCCGTGGCAACACCGCTTCCAA
TGATTGCGACGAGCTTTTCAAAAAGTACAGGGCTTGTCTGAATCTCGCAC
TGAAAGAACGAGGTATCGACACGATGCTCGATGATGCTCGTAAGAGCACG
AAGGACAGCGAAGCTGAATACATGCGGAAAAGCTGAATGTCCGCGTCAAT
CGCCCCCGAGTGCAACGATATCAAAGAAAAATATGATACATGCTTCCTGA
AATGGTACAGCGAAAAATACCTCCGTGGCAACACCGCTTCCAATGATTGC
GACGAGCTTTTCAAAAAGTACAGGGCTTGTCTGAATCTCGCACTGAAAGA
ACGAGGTATCGACACGATGCTCGATGATGCTCGTAAGAGCACGAAGGACA
GCGAAGCTGAATACATGCGGAAAAGCTGAATGTCCGCGTCAATCGCCCCC
GAGTGCAACGATATCAAAGAAAAATATGATACATGCTTCCTGAAATGGTA
CAGCGAAAAATACCTCCGTGGCAACACCGCTTCCAATGATTGCGACGAGC
TTTTCAAAAAGTACAGGGCTTGTCTGAATCTCGCACTGAAAGAACGAGGT
ATCGACACGATGCTCGATGATGCTCGTAAGAGCACGAAGGACAGCGAAGC
TGAATACATGCGGAAAAGCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007436KJC3_007436Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007436-T1.exon1KJC3_007436-T1.exon1Aspergillus niger KJC3exon
KJC3_007436-T1.exon2KJC3_007436-T1.exon2Aspergillus niger KJC3exon
KJC3_007436-T1.exon3KJC3_007436-T1.exon3Aspergillus niger KJC3exon
KJC3_007436-T1.exon4KJC3_007436-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007436-T1.cdsKJC3_007436-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007436-T1KJC3_007436-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007918
DBxrefPFAM:PF05254
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2462507..2462924 +
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