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KJC3_007446-T1, KJC3_007446-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007446-T1
Unique NameKJC3_007446-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2488151..2489506-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007446-T1 ID=KJC3_007446-T1|Name=KJC3_007446-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1356bp|location=Sequence derived from alignment at ch5:2488151..2489506- (Aspergillus niger KJC3)
GCAGCACCACGTCATACAACCTGAGGAGTTTTGCCCTGGAATATTTCCTT
CCGGATTGGCGTTATTCAGGGACGCATCAACCAGACCTGACGTCTCGCAA
AACACCCATCCAGTTCGATAAGTTTGCGGTCACGCACACTGCACACTCCC
CGACCACCGCAGTTCGGGGGCCCTCCAACACATCCAACCTAATCTAATCG
CCTATTCACATTAAAATACACAATTCATGCCCCCACGCCGCCGGGCCCCT
CGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAGAT
CCTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCT
TTACAACGGTCGTCTACGGCACGCCCTTCTCCCTCGACCTTGTCTTCAGT
TGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCTTGGCTTGGT
GTGGTTGTTGACTAGTGGGATTGGGTAAGTTCTTTAGCTTCCATTTTCAC
GGCCCAAGGCACAAGTTCTAACAAGAAGTCTACATTAAAGGGTTATATTC
CTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACTTCGCCCTAAC
CCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACGCATTCCGTGC
CCGCGAATTGGCTCTGGTGGGGCCTGCAGGGTGCGAGTGCCGCGTTCATG
ACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGCAGCCTATCAG
TTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGTATATCTGCTG
GAGCTTCAGGCGGTGGTGAGGCGCAAAGCGGTGCTGGCGGTGAGGAGTCA
TTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGCGCGATAGTAG
CAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGTGACGCGGCAG
TATAGATTTCCTTTTTTTGCTTCTTTTTCCCTTTCTATGTCATGACCTTA
TCACCCTATTATCGCCTTTATTGACCTTGAGTACGTGAGACTATCACTGG
ATGTGGCTATGGTCTTTTTCACGTTTGCTCTTATTCCTTTCTCATGTATA
CCCTAGCTGGCTGGTACCTGCATTGGTGGCGTTGTTGGATTGGATTGATG
CCAATTACTTCTTTTCATATTGTGATCCTTGATGTGTTGATTTTGAATTC
TTACTTTGTGAAATATATATTCATCCTGCTGTGGCGATCAAAAGGATTTA
GAAGGCACTGGCGTTGTCTATATCCAGATGTACTACTTTAGTACATAGCG
CGGCATTAGAACAAGGACCATAGAGTATAGTCAAGAAAGAGTCTATGAAC
GTTTTC
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Coding sequence (CDS) from alignment at ch5:2488151..2489506-

>KJC3_007446-T1 ID=KJC3_007446-T1|Name=KJC3_007446-T1|organism=Aspergillus niger KJC3|type=CDS|length=1326bp|location=Sequence derived from alignment at ch5:2488151..2489506- (Aspergillus niger KJC3)
GGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAGCTTATCCCCGACT
TCGCCCTAACCCTACACTTCCTCCACCTCATCGCTACAACCTTGTACACG
CATTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTGCAGGGTGCGAGTGC
CGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGTTGGCGGGAACTGC
AGCCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAGCAGTGGTGGTGGT
ATATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAAAGCGGTGCTGGCGG
TGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGGGGACGAGGCTTGC
GCGATAGTAGCAGTGGCGGGGATGAGTATGAGATGGTGGAAATGAAGGGT
GACGCGGCAGTATAGATGCCCCCACGCCGCCGGGCCCCTCGAGCGGGCTC
TCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAGATCCTCCTCCTTC
AAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCTCTTTACAACGGTC
GTCTACGGCACGCCCTTCTCCCTCGACCTTGTCTTCAGTTGGAATGCCCT
CCGCGGCGATACTACCATTGGATGGATGCTTGGCTTGGTGTGGTTGTTGA
CTAGTGGGATTGGGGTTATATTCCTCCTTCTTCTCGTCGCTCGGTCCAAG
CTTATCCCCGACTTCGCCCTAACCCTACACTTCCTCCACCTCATCGCTAC
AACCTTGTACACGCATTCCGTGCCCGCGAATTGGCTCTGGTGGGGCCTGC
AGGGTGCGAGTGCCGCGTTCATGACATTCTTGGGCATTTGGGCCTGTCGT
TGGCGGGAACTGCAGCCTATCAGTTTTGGTGGTATTGGCGGAGGTAGTAG
CAGTGGTGGTGGTATATCTGCTGGAGCTTCAGGCGGTGGTGAGGCGCAAA
GCGGTGCTGGCGGTGAGGAGTCATTCTCACTGTCGAGGGGTAGAGGAAGG
GGACGAGGCTTGCGCGATAGTAGCAGTGGCGGGGATGAGTATGAGATGGT
GGAAATGAAGGGTGACGCGGCAGTATAGATGCCCCCACGCCGCCGGGCCC
CTCGAGCGGGCTCTCGAACTGACCTTCCACCACTGAAGATTGTCCGGAAG
ATCCTCCTCCTTCAAGTCGCCTACTATGTCACCGCCACGGCTCTCATCCT
CTTTACAACGGTCGTCTACGGCACGCCCTTCTCCCTCGACCTTGTCTTCA
GTTGGAATGCCCTCCGCGGCGATACTACCATTGGATGGATGCTTGGCTTG
GTGTGGTTGTTGACTAGTGGGATTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007446KJC3_007446Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007446-T1KJC3_007446-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007446-T1.cdsKJC3_007446-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007446-T1.utr3p1KJC3_007446-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007446-T1.exon2KJC3_007446-T1.exon2Aspergillus niger KJC3exon
KJC3_007446-T1.exon1KJC3_007446-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007446-T1.utr5p1KJC3_007446-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019185
DBxrefPFAM:PF09801
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2488151..2489506 -
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