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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2505729..2509147+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007454-T1 ID=KJC3_007454-T1|Name=KJC3_007454-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3419bp|location=Sequence derived from alignment at ch5:2505729..2509147+ (Aspergillus niger KJC3)
CAGCATCCTTCGCAGTCAGCCATTGCTCCATATCAGTGATTGCTGCTCAA
TAGGCTGGATATGTTACGATAATCGCCAACTGGTCGCGCTTCTGTTCGTC
GTTACTCCGCCTGGATCGATGAGCTAAGTGAGAGCGCTTCCCGAGTGTCC
GCGACAGCATCATCTGCAGCTCTCCTGGGATCGCCGCGCTCGAGAATCTC
CAAGCCAAGATGTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTC
ATCAAAGGCTTCACAATCGATCCTCGAGCTTGATGGAGGAATCAAGATCC
TTGTGGACGTCGGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAA
CTCGAAAAGTGAGCTCCCACTGCAGTCCTTGTATATCTATCGGAGGGGTC
GATTTTCTGATATAATAATGCTAGACATGTCCCGACCTTGTCGCTCATTC
TTCTAACCCACGCTACACCCGCTCATATTGGTGCCTTTGCCCATTGTTGC
AAGACCTTCCCTCTCTTCACGCAAATTCCCGTCTACGCTACGAGTCCCGT
CATTGCGCTCGGTCGCACGTTGCTACAGGATTTATACGCCTCTTCTCCGC
TGGCCGCAACATTCTTACCCAAGGCGTCGATCTCCGAGCCCGGAGCTTCC
ACGGCTGCAGCTTCAGCCGCTGCGTCGGTGGCCGAAGGCGACGAAAGCAC
CGAAGCTACTCATGCCGGGCGCATCCTCCTCCAACCTCCTACCGCCGAAG
AAATCGCCCGGTACTTCTCTTTGATACACCCGTTGAAATACTCACAACCA
CACCAACCGCTTCCGTCACCATTCTCCCCGCCCTTGAACGGCCTTACGCT
GACCGCATACAATGCTGGACACACCGTTGGTGGTACGATATGGCATATAC
AACATGGCATGGAGTCAATTGTCTACGCGGTCGACTGGAACCAAGCTCGA
GAAAGCGTTGTCGCGGGCGCTGCCTGGTTTGGAGGCTCCGGTGCCAGTGG
AACGGAGGTCATCGAGCAGCTGCGCAAACCTACGGCGCTGGTATGCAGTA
CTAGGGGAGGTGAACGCTTCGCGCTGCCCGGAGGCAGGAAGAAGCGGGAT
GACTTGCTGCTGGACATGATCCGGAGCACCATCGCCAAGGGTGGCACAGT
GCTGATTCCTACGGATACCAGCGCTCGCGTGCTGGAGCTGGCTTATGCGC
TGGAACATGCCTGGCGCGATGCGGCAGGCTCTGGCCAGGGCGATGATGTA
CTGAAAGGAGCCGGGCTATACCTGGCCGGTCGGAAAGCTAATACTACGAT
GCGACTGGCAAGGAGTATGTTGGAGTGGATGGACGAAAATATCGTGCGAG
AGTTTGAGGCTGCTGAGGGTGTGGATGCAGCGACTGGCCAGTCGAATACA
GAAGGGCAACGGGCAGGTCAGAATCAAGGCAAGACAGAAGGAAAGGGCGT
GGGACCTTTTACGTTCAAGCATCTCCGAATTTTGGAACGCAAGAAGCGAT
TAGAGAAGATCCTGTCCGACCAAAAGCCCAAGGTAATTCTGGCTTCCGAT
ACGTCGCTGGATTGGGGATTCGCGAAGGACTCTCTACGGCTGGTGGCGGA
AGGTGCCAACAACCTACTGCTCTTAACGGAGCCTCTGCACAAGGAGAGGA
TCACGGAGGGCCAGGAGAGCACCCACAGGAAGACACTCGGCAGTATGATC
TGGCAGTGGTATGAAGAACGAAAGGATGGCGTTGCTCTGGAAAAGGCATC
GGACGGCGAGATGCTGGAGCAGGTGCACAGCGGAGGCCGGGATCTCTCCT
GGACGGATGTGCGACGTGCGCCTCTGGACGCAGGCGAGCAGCTGCTTTAC
CAGCAGTATCTGGCCACGAAACGACAACTTCAAGATACCTCTCAAGCAAG
AGGACAGGGAAACCTTGATAATGCCGCCGACGCGCTCGACGACCGGTCAA
GCTCTACATCAGAAGACTCGGAGACGGAACAACAGGGCCGCGTCCTGAAT
TTCTCCACCTCGTTAGCACACTCCAACCGCAACAAACTCGGCCTCAGCGA
TGAAGACCTTGGCGTCAACATTCTTCTACGGCGTAAGAATGTCTACGACT
ACGATGTACGAGGCAAGAAAGGTCGCGAGCGCATGTTTCCGTATGTGGCA
CCCCGAAAAAAGGGGGACGAGTTTGGCGAGTTCATCCGGCCTGAGGAGTA
CCTCCGTGCTGAGGAACGCGAGGAGGCCGACATGCAGCAGCGCCGGACCG
ACTCCCAGACCAAGCTGGGGCAGAAACGTCGATGGGACGAAACAGCGCCC
CATGGACGTCGACTGTCGGGCAGTGGTGCCAAACGCCAAGCGCTTGGAGA
TGCGCAGAAACGGGATGTCAGCACTGCTGACGAACTGAGCCTCGCCGAAG
ATGGCGAGGTGGATGCCGCGGTATCTTCGGAGGATGAGGTGGAGGGACAG
AGCTTTGAGGGGCCAGCGAAGGCAGTATACGAGAAGGCTACGCTGACCAT
AAATGCTCGGCTGGCATACGTGGACTTTACGGGACTACACGACAAGCGCA
GTCTGGAGATGCTCATCCCGCTCATCCAGCCCCGGAAGCTGATCCTGGTT
GGGGGTATGAAACAGGAGACGACCGCGTTGGCGACCGAATGCCAGAAGCT
CCTGGCAGCCAAATCCGGAATGGACGTTTCGGCCGCAGACTCGGCAGTCA
TCTTCACGCCGGTCAACGGCGAGGTTGTTGACGCCAGCGTCGACACCAAC
GCATGGATGGTCAAGCTGAGCAACAACTTGGTCCGGCGTTTGAAGTGGCA
GCACGTACGCAGCCTGGGAGTGGTCACGCTCACGGCGCAGTTGCGGGGGC
CGGAACAGGCCGTCCTGGAGGACTCCACGGAAGAGAACCCCAGCAAGAAG
CCAAAGCTGTTGGAAGAGGAGAAGAAGGAAGAAGGAGGTAGCACCGAGGT
CGCGACGAACGCACCACCAGAGGGGGCCAAACCATCAGCTGACAAGTCTG
AGGTGTACCCACTGCTGGATGTGCTGCCGGTCAACATGGCGGCGGGAACG
CGATCCATGACCCGGCCGCTCCATGTGGGCGACCTGCGGCTGGCAGATTT
GCGCAAGATCATGCAAGGGGCCGGACACACGGCGGAATTCAGGGGCGAGG
GAACGCTCCTTATCGATGGGATGGTGGCAGTGCGGAAGTCGGCGACGGGG
CGGATTGAGATTGAAGCATCGGCGCAGTCTGCGGCGGCGACGAACCTGGG
ACGAGGAGGAGGGAGCTTCTTGGCTGTGAAGCAGAAGATTTATGAAGGAT
TGGCTGTTGTGTCGGGGAGTTAGCTGCAGCTGCAACGAACCGGTTCGTCT
CGATGTTGGATTATACCAACCAAGTAGATCAAATAAGACATAAGGTAGTA
CTCTACCCACTATCCTTAC back to topCoding sequence (CDS) from alignment at ch5:2505729..2509147+ >KJC3_007454-T1 ID=KJC3_007454-T1|Name=KJC3_007454-T1|organism=Aspergillus niger KJC3|type=CDS|length=6096bp|location=Sequence derived from alignment at ch5:2505729..2509147+ (Aspergillus niger KJC3)
ATGTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTCATCAAAGGC
TTCACAATCGATCCTCGAGCTTGATGGAGGAATCAAGATCCTTGTGGACG
TCGGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAACTCGAAAAA
CATGTCCCGACCTTGTCGCTCATTCTTCTAACCCACGCTACACCCGCTCA
TATTGGTGCCTTTGCCCATTGTTGCAAGACCTTCCCTCTCTTCACGCAAA
TTCCCGTCTACGCTACGAGTCCCGTCATTGCGCTCGGTCGCACGTTGCTA
CAGGATTTATACGCCTCTTCTCCGCTGGCCGCAACATTCTTACCCAAGGC
GTCGATCTCCGAGCCCGGAGCTTCCACGGCTGCAGCTTCAGCCGCTGCGT
CGGTGGCCGAAGGCGACGAAAGCACCGAAGCTACTCATGCCGGGCGCATC
CTCCTCCAACCTCCTACCGCCGAAGAAATCGCCCGGTACTTCTCTTTGAT
ACACCCGTTGAAATACTCACAACCACACCAACCGCTTCCGTCACCATTCT
CCCCGCCCTTGAACGGCCTTACGCTGACCGCATACAATGCTGGACACACC
GTTGGTGGTACGATATGGCATATACAACATGGCATGGAGTCAATTGTCTA
CGCGGTCGACTGGAACCAAGCTCGAGAAAGCGTTGTCGCGGGCGCTGCCT
GGTTTGGAGGCTCCGGTGCCAGTGGAACGGAGGTCATCGAGCAGCTGCGC
AAACCTACGGCGCTGGTATGCAGTACTAGGGGAGGTGAACGCTTCGCGCT
GCCCGGAGGCAGGAAGAAGCGGGATGACTTGCTGCTGGACATGATCCGGA
GCACCATCGCCAAGGGTGGCACAGTGCTGATTCCTACGGATACCAGCGCT
CGCGTGCTGGAGCTGGCTTATGCGCTGGAACATGCCTGGCGCGATGCGGC
AGGCTCTGGCCAGGGCGATGATGTACTGAAAGGAGCCGGGCTATACCTGG
CCGGTCGGAAAGCTAATACTACGATGCGACTGGCAAGGAGTATGTTGGAG
TGGATGGACGAAAATATCGTGCGAGAGTTTGAGGCTGCTGAGGGTGTGGA
TGCAGCGACTGGCCAGTCGAATACAGAAGGGCAACGGGCAGGTCAGAATC
AAGGCAAGACAGAAGGAAAGGGCGTGGGACCTTTTACGTTCAAGCATCTC
CGAATTTTGGAACGCAAGAAGCGATTAGAGAAGATCCTGTCCGACCAAAA
GCCCAAGGTAATTCTGGCTTCCGATACGTCGCTGGATTGGGGATTCGCGA
AGGACTCTCTACGGCTGGTGGCGGAAGGTGCCAACAACCTACTGCTCTTA
ACGGAGCCTCTGCACAAGGAGAGGATCACGGAGGGCCAGGAGAGCACCCA
CAGGAAGACACTCGGCAGTATGATCTGGCAGTGGTATGAAGAACGAAAGG
ATGGCGTTGCTCTGGAAAAGGCATCGGACGGCGAGATGCTGGAGCAGGTG
CACAGCGGAGGCCGGGATCTCTCCTGGACGGATGTGCGACGTGCGCCTCT
GGACGCAGGCGAGCAGCTGCTTTACCAGCAGTATCTGGCCACGAAACGAC
AACTTCAAGATACCTCTCAAGCAAGAGGACAGGGAAACCTTGATAATGCC
GCCGACGCGCTCGACGACCGGTCAAGCTCTACATCAGAAGACTCGGAGAC
GGAACAACAGGGCCGCGTCCTGAATTTCTCCACCTCGTTAGCACACTCCA
ACCGCAACAAACTCGGCCTCAGCGATGAAGACCTTGGCGTCAACATTCTT
CTACGGCGTAAGAATGTCTACGACTACGATGTACGAGGCAAGAAAGGTCG
CGAGCGCATGTTTCCGTATGTGGCACCCCGAAAAAAGGGGGACGAGTTTG
GCGAGTTCATCCGGCCTGAGGAGTACCTCCGTGCTGAGGAACGCGAGGAG
GCCGACATGCAGCAGCGCCGGACCGACTCCCAGACCAAGCTGGGGCAGAA
ACGTCGATGGGACGAAACAGCGCCCCATGGACGTCGACTGTCGGGCAGTG
GTGCCAAACGCCAAGCGCTTGGAGATGCGCAGAAACGGGATGTCAGCACT
GCTGACGAACTGAGCCTCGCCGAAGATGGCGAGGTGGATGCCGCGGTATC
TTCGGAGGATGAGGTGGAGGGACAGAGCTTTGAGGGGCCAGCGAAGGCAG
TATACGAGAAGGCTACGCTGACCATAAATGCTCGGCTGGCATACGTGGAC
TTTACGGGACTACACGACAAGCGCAGTCTGGAGATGCTCATCCCGCTCAT
CCAGCCCCGGAAGCTGATCCTGGTTGGGGGTATGAAACAGGAGACGACCG
CGTTGGCGACCGAATGCCAGAAGCTCCTGGCAGCCAAATCCGGAATGGAC
GTTTCGGCCGCAGACTCGGCAGTCATCTTCACGCCGGTCAACGGCGAGGT
TGTTGACGCCAGCGTCGACACCAACGCATGGATGGTCAAGCTGAGCAACA
ACTTGGTCCGGCGTTTGAAGTGGCAGCACGTACGCAGCCTGGGAGTGGTC
ACGCTCACGGCGCAGTTGCGGGGGCCGGAACAGGCCGTCCTGGAGGACTC
CACGGAAGAGAACCCCAGCAAGAAGCCAAAGCTGTTGGAAGAGGAGAAGA
AGGAAGAAGGAGGTAGCACCGAGGTCGCGACGAACGCACCACCAGAGGGG
GCCAAACCATCAGCTGACAAGTCTGAGGTGTACCCACTGCTGGATGTGCT
GCCGGTCAACATGGCGGCGGGAACGCGATCCATGACCCGGCCGCTCCATG
TGGGCGACCTGCGGCTGGCAGATTTGCGCAAGATCATGCAAGGGGCCGGA
CACACGGCGGAATTCAGGGGCGAGGGAACGCTCCTTATCGATGGGATGGT
GGCAGTGCGGAAGTCGGCGACGGGGCGGATTGAGATTGAAGCATCGGCGC
AGTCTGCGGCGGCGACGAACCTGGGACGAGGAGGAGGGAGCTTCTTGGCT
GTGAAGCAGAAGATTTATGAAGGATTGGCTGTTGTGTCGGGGAGTTAGAT
GTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTCATCAAAGGCTT
CACAATCGATCCTCGAGCTTGATGGAGGAATCAAGATCCTTGTGGACGTC
GGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAACTCGAAAAACA
TGTCCCGACCTTGTCGCTCATTCTTCTAACCCACGCTACACCCGCTCATA
TTGGTGCCTTTGCCCATTGTTGCAAGACCTTCCCTCTCTTCACGCAAATT
CCCGTCTACGCTACGAGTCCCGTCATTGCGCTCGGTCGCACGTTGCTACA
GGATTTATACGCCTCTTCTCCGCTGGCCGCAACATTCTTACCCAAGGCGT
CGATCTCCGAGCCCGGAGCTTCCACGGCTGCAGCTTCAGCCGCTGCGTCG
GTGGCCGAAGGCGACGAAAGCACCGAAGCTACTCATGCCGGGCGCATCCT
CCTCCAACCTCCTACCGCCGAAGAAATCGCCCGGTACTTCTCTTTGATAC
ACCCGTTGAAATACTCACAACCACACCAACCGCTTCCGTCACCATTCTCC
CCGCCCTTGAACGGCCTTACGCTGACCGCATACAATGCTGGACACACCGT
TGGTGGTACGATATGGCATATACAACATGGCATGGAGTCAATTGTCTACG
CGGTCGACTGGAACCAAGCTCGAGAAAGCGTTGTCGCGGGCGCTGCCTGG
TTTGGAGGCTCCGGTGCCAGTGGAACGGAGGTCATCGAGCAGCTGCGCAA
ACCTACGGCGCTGGTATGCAGTACTAGGGGAGGTGAACGCTTCGCGCTGC
CCGGAGGCAGGAAGAAGCGGGATGACTTGCTGCTGGACATGATCCGGAGC
ACCATCGCCAAGGGTGGCACAGTGCTGATTCCTACGGATACCAGCGCTCG
CGTGCTGGAGCTGGCTTATGCGCTGGAACATGCCTGGCGCGATGCGGCAG
GCTCTGGCCAGGGCGATGATGTACTGAAAGGAGCCGGGCTATACCTGGCC
GGTCGGAAAGCTAATACTACGATGCGACTGGCAAGGAGTATGTTGGAGTG
GATGGACGAAAATATCGTGCGAGAGTTTGAGGCTGCTGAGGGTGTGGATG
CAGCGACTGGCCAGTCGAATACAGAAGGGCAACGGGCAGGTCAGAATCAA
GGCAAGACAGAAGGAAAGGGCGTGGGACCTTTTACGTTCAAGCATCTCCG
AATTTTGGAACGCAAGAAGCGATTAGAGAAGATCCTGTCCGACCAAAAGC
CCAAGGTAATTCTGGCTTCCGATACGTCGCTGGATTGGGGATTCGCGAAG
GACTCTCTACGGCTGGTGGCGGAAGGTGCCAACAACCTACTGCTCTTAAC
GGAGCCTCTGCACAAGGAGAGGATCACGGAGGGCCAGGAGAGCACCCACA
GGAAGACACTCGGCAGTATGATCTGGCAGTGGTATGAAGAACGAAAGGAT
GGCGTTGCTCTGGAAAAGGCATCGGACGGCGAGATGCTGGAGCAGGTGCA
CAGCGGAGGCCGGGATCTCTCCTGGACGGATGTGCGACGTGCGCCTCTGG
ACGCAGGCGAGCAGCTGCTTTACCAGCAGTATCTGGCCACGAAACGACAA
CTTCAAGATACCTCTCAAGCAAGAGGACAGGGAAACCTTGATAATGCCGC
CGACGCGCTCGACGACCGGTCAAGCTCTACATCAGAAGACTCGGAGACGG
AACAACAGGGCCGCGTCCTGAATTTCTCCACCTCGTTAGCACACTCCAAC
CGCAACAAACTCGGCCTCAGCGATGAAGACCTTGGCGTCAACATTCTTCT
ACGGCGTAAGAATGTCTACGACTACGATGTACGAGGCAAGAAAGGTCGCG
AGCGCATGTTTCCGTATGTGGCACCCCGAAAAAAGGGGGACGAGTTTGGC
GAGTTCATCCGGCCTGAGGAGTACCTCCGTGCTGAGGAACGCGAGGAGGC
CGACATGCAGCAGCGCCGGACCGACTCCCAGACCAAGCTGGGGCAGAAAC
GTCGATGGGACGAAACAGCGCCCCATGGACGTCGACTGTCGGGCAGTGGT
GCCAAACGCCAAGCGCTTGGAGATGCGCAGAAACGGGATGTCAGCACTGC
TGACGAACTGAGCCTCGCCGAAGATGGCGAGGTGGATGCCGCGGTATCTT
CGGAGGATGAGGTGGAGGGACAGAGCTTTGAGGGGCCAGCGAAGGCAGTA
TACGAGAAGGCTACGCTGACCATAAATGCTCGGCTGGCATACGTGGACTT
TACGGGACTACACGACAAGCGCAGTCTGGAGATGCTCATCCCGCTCATCC
AGCCCCGGAAGCTGATCCTGGTTGGGGGTATGAAACAGGAGACGACCGCG
TTGGCGACCGAATGCCAGAAGCTCCTGGCAGCCAAATCCGGAATGGACGT
TTCGGCCGCAGACTCGGCAGTCATCTTCACGCCGGTCAACGGCGAGGTTG
TTGACGCCAGCGTCGACACCAACGCATGGATGGTCAAGCTGAGCAACAAC
TTGGTCCGGCGTTTGAAGTGGCAGCACGTACGCAGCCTGGGAGTGGTCAC
GCTCACGGCGCAGTTGCGGGGGCCGGAACAGGCCGTCCTGGAGGACTCCA
CGGAAGAGAACCCCAGCAAGAAGCCAAAGCTGTTGGAAGAGGAGAAGAAG
GAAGAAGGAGGTAGCACCGAGGTCGCGACGAACGCACCACCAGAGGGGGC
CAAACCATCAGCTGACAAGTCTGAGGTGTACCCACTGCTGGATGTGCTGC
CGGTCAACATGGCGGCGGGAACGCGATCCATGACCCGGCCGCTCCATGTG
GGCGACCTGCGGCTGGCAGATTTGCGCAAGATCATGCAAGGGGCCGGACA
CACGGCGGAATTCAGGGGCGAGGGAACGCTCCTTATCGATGGGATGGTGG
CAGTGCGGAAGTCGGCGACGGGGCGGATTGAGATTGAAGCATCGGCGCAG
TCTGCGGCGGCGACGAACCTGGGACGAGGAGGAGGGAGCTTCTTGGCTGT
GAAGCAGAAGATTTATGAAGGATTGGCTGTTGTGTCGGGGAGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007454-T1.utr5p1 | KJC3_007454-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007454-T1.utr3p1 | KJC3_007454-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260MBW |
| DBxref | InterPro:IPR035639 |
| DBxref | InterPro:IPR036866 |
| DBxref | InterPro:IPR001279 |
| DBxref | InterPro:IPR011108 |
| DBxref | InterPro:IPR025069 |
| DBxref | InterPro:IPR022712 |
| DBxref | PFAM:PF07521 |
| DBxref | PFAM:PF16661 |
| DBxref | PFAM:PF13299 |
| DBxref | PFAM:PF10996 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2505729..2509147 + |
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