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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2542675..2545270- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007462-T1 ID=KJC3_007462-T1|Name=KJC3_007462-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2596bp|location=Sequence derived from alignment at ch5:2542675..2545270- (Aspergillus niger KJC3)
TTCTTATTATTACTACCACGATCCCTCTCCCCTTCTTCTCTTTCTACTGC
GACTTGCTGCGACTTGCGACCTTCAACCATCCCCCATCTACTGCTACTAT
AACAGAATACCAAGTATAGTCCTTGGTGTCGACGTTTCTCCTTCTATCAT
CACCCACTAAACAGTCTGTCGCCCGCCTTACTGCATCCAAGATCGATTTC
AACTGCGACCACAACGCACTACCTTCCGCCACGGTAAGTCTTGCCTGTAC
CTGCTCGGCCTTTGCATGTTGTAGCTCCCCTTGTCTCAGCGGCGTTTGTA
TAACGCTCAACCTCCGCCTGCCTGCATTCTTCTTTATTCTCCTATCAGGC
CCTCCCCACTCCTTGTTTCCTATCCCCTTCCTTGCTGCCCTGGTTTCTTT
ACATTCCATCCCCTCTGTCCTCCCCTCCCCTCCCCTCCAACTCCACTCCT
CCACCCTATCCATTCTTCAATCACATAGATGGGAAATTAATGTTGTATCT
TGACCCTTTAGATTATTTTCCGCAGTGGGTTCTTCACAGCACCTGCTCAT
CTCTCACCTTCTCTTGAAGCTTGGCCTTTTGTTTCCTGTTCCGGGAATAT
CGCACGCTTGAACGGTGTTTCTTGAACGGCTTCTGCACAGCCGTTGTTTG
ACTTCCGACCTCATCTAGATTGCCTGCATTCCGGCACATCTTTCAACATT
TTTCACCCTACGAAACCCCCGGTCCTAGCGCTTAAACCAACAGTCATCAC
GGGGACCTACACAGATCACCGAAGGTGGATGGAGACGTATCACGGGCACG
TCCGCACTCCTGCGGACGCTATCATCCTCTTCGAAGCTTGTCGCATTGGC
CTTCTCCCCCGCGTACAGAGACGTTTATCCGAGAAGGAACGTCAATTAAT
TCGTTCCGGGTCAGTCTTTGTCTGGGATGAACGCGAAGCGGGCATGCGAA
GATGGACCGATGGCAAGTCATGGAGTGCCAGTCGCGTATCGGGAAGCTTC
CTAACATATCGCGAGATGGAAGGCAAACGGGGCGGGACTGGTGTAGCTCA
GACTACGATGTCGAGAGCTGGTAAAACGCCAGAAAGCACACGAGGCAGTG
ACGACGACCGTGGAGATGGTGCGGATGAAGGGCCGGACGGCTACCGCTAC
AAGCCCGATGGCTTGATGAAACAATCCTTCAGCATTACGACATCTACCGG
CCAGCACCTCCATCTTATCAGCTACTACTCGAGGTCACATCCTTCTGCCG
CCAATCTTCAACAGCCGTCGACAGACCCCAACTTGCGGCATGTGCGTCCT
CAGAAGGGCCTTTATCCGGAGTCTACTGTGAATGATCAACAGAATCTCCC
CGTTGTGACTCGTGGTCCCATGGCCGGTGCCGCATACGTGCCGCCTCATC
CCATGGCACCCTATGGACGCTCTCCGGCTGCGCACGCGGCGCCATACACT
CCCTCATATACATGGCCTCCGACTCCGCTGGCTACTCCGCCCGTTCCGGT
CCACTATCCCTCTTACCTTCCGTCAGTGTCTCAGCCCAATGGCCAAATGC
CATATGGCCATCAGGCTGCTGTGCCTCCTGGCACGCCCTTGCCGCCTCCG
CAACCGCCAGGATTGCCGGCACACCACGAGCGGCCGGTACATGTAGCTGA
AGTGACGATGGCGCCATCTCTCCATCAACCGTCGAGCGTGCAGGTGCTTG
CAAGCCGGTCACCACGAGTGCCGCCAGGAGCGCACGAGCTTCTTCACCGC
CCGAGTCCACCAGAGCTTGGCCCGCCTCGCGAGATCGCGAGAACGTCACC
CCGCACGCAGCCACATCATATGCCGCACAGCAACGGCATCCCATCGATTG
CGCGCAGTCCCCAGCTTATCAGCCAGCCACCGTCCAGTAGCGTACAAATT
CCTCCGCCGAGTACGATGGCACCCAAGCCACTGGAAGCCAGCACAGGCAC
TACCGTGCCCAGCATCGGTGCGCTGATGAACGGCGCGCCTTCTGGTGGAT
TGCCGTCGATCGCCGCGCCCCCAGCCCCGGCCGCAGGACGCGCCGAGGGA
CCCCGGGACATTCCCAGCGAAAAGATCGGGTTTGGGGGAGAAGACATGCG
CGCACTCCGGCAATTGGACCGGGTCTTCACTGCGTAGCGTGCTGGTGGCA
TTTTCAGTTCTTTTAACGAAATTAGATCCTCATGCTGTCGATCTCTTCTT
TTCTATTTCCTTTTTTTTGTTGTATACGAATTAGCATATTGCCTTGGTTT
GACACTGTTCAGATTGGAATGGTCATGTTTACGACACTTGTGTGGTTTAT
TCCCTGGGTTTGCTTTGATCCGTTGGTCCCAGGCAGGCTTGAAATGGATC
GGCGTTGTACAAGAGGAGCATTGCTATACAGCATGGGTGGGGTCTCTTTT
TAAATGTCTTGTGTGATTTCGTGTGCTGCATTGTTGTTGATACTTGCATT
GGGATCGGTCACGACCGGCGGTTGGGCTGCGATGGTACACCCTGAATACA
ACAGATCAGAATTCGAATCCAACTACTTGTAATTGCAGTAGACGCAGTCG
TACACTCCAGACCAGGATCGATTCATACATCCTCCCGTCCAGTGGC back to topCoding sequence (CDS) from alignment at ch5:2542675..2545270- >KJC3_007462-T1 ID=KJC3_007462-T1|Name=KJC3_007462-T1|organism=Aspergillus niger KJC3|type=CDS|length=1359bp|location=Sequence derived from alignment at ch5:2542675..2545270- (Aspergillus niger KJC3)
ATGGAGACGTATCACGGGCACGTCCGCACTCCTGCGGACGCTATCATCCT
CTTCGAAGCTTGTCGCATTGGCCTTCTCCCCCGCGTACAGAGACGTTTAT
CCGAGAAGGAACGTCAATTAATTCGTTCCGGGTCAGTCTTTGTCTGGGAT
GAACGCGAAGCGGGCATGCGAAGATGGACCGATGGCAAGTCATGGAGTGC
CAGTCGCGTATCGGGAAGCTTCCTAACATATCGCGAGATGGAAGGCAAAC
GGGGCGGGACTGGTGTAGCTCAGACTACGATGTCGAGAGCTGGTAAAACG
CCAGAAAGCACACGAGGCAGTGACGACGACCGTGGAGATGGTGCGGATGA
AGGGCCGGACGGCTACCGCTACAAGCCCGATGGCTTGATGAAACAATCCT
TCAGCATTACGACATCTACCGGCCAGCACCTCCATCTTATCAGCTACTAC
TCGAGGTCACATCCTTCTGCCGCCAATCTTCAACAGCCGTCGACAGACCC
CAACTTGCGGCATGTGCGTCCTCAGAAGGGCCTTTATCCGGAGTCTACTG
TGAATGATCAACAGAATCTCCCCGTTGTGACTCGTGGTCCCATGGCCGGT
GCCGCATACGTGCCGCCTCATCCCATGGCACCCTATGGACGCTCTCCGGC
TGCGCACGCGGCGCCATACACTCCCTCATATACATGGCCTCCGACTCCGC
TGGCTACTCCGCCCGTTCCGGTCCACTATCCCTCTTACCTTCCGTCAGTG
TCTCAGCCCAATGGCCAAATGCCATATGGCCATCAGGCTGCTGTGCCTCC
TGGCACGCCCTTGCCGCCTCCGCAACCGCCAGGATTGCCGGCACACCACG
AGCGGCCGGTACATGTAGCTGAAGTGACGATGGCGCCATCTCTCCATCAA
CCGTCGAGCGTGCAGGTGCTTGCAAGCCGGTCACCACGAGTGCCGCCAGG
AGCGCACGAGCTTCTTCACCGCCCGAGTCCACCAGAGCTTGGCCCGCCTC
GCGAGATCGCGAGAACGTCACCCCGCACGCAGCCACATCATATGCCGCAC
AGCAACGGCATCCCATCGATTGCGCGCAGTCCCCAGCTTATCAGCCAGCC
ACCGTCCAGTAGCGTACAAATTCCTCCGCCGAGTACGATGGCACCCAAGC
CACTGGAAGCCAGCACAGGCACTACCGTGCCCAGCATCGGTGCGCTGATG
AACGGCGCGCCTTCTGGTGGATTGCCGTCGATCGCCGCGCCCCCAGCCCC
GGCCGCAGGACGCGCCGAGGGACCCCGGGACATTCCCAGCGAAAAGATCG
GGTTTGGGGGAGAAGACATGCGCGCACTCCGGCAATTGGACCGGGTCTTC
ACTGCGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007462-T1.utr3p1 | KJC3_007462-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018608 |
| DBxref | PFAM:PF09729 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2542675..2545270 - |
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