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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2560532..2564398- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007465-T1 ID=KJC3_007465-T1|Name=KJC3_007465-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3867bp|location=Sequence derived from alignment at ch5:2560532..2564398- (Aspergillus niger KJC3)
CTAACCTTCTCATCGTCTCTTATTGACGGATTAGTTACTTGGGTTGATTA
CTACTAGATTTCTCCTCATCCGCAAACTTATTCATTCATACAGTAATCGT
GGGAATCCACTCACCATCACGTCAAAGTCACCTTCACCACCACATGCTTA
TCTGGTTGCCTGGACCCCTTCCTTTCCTGTGCCTTCCCTTCCCGTTACAC
TGCAGCTGACCTTCGTATGACGATGGTCGGCTTCCTCTTGCGGAATCTTG
TTGTCTGAACTGAGGCGAAAAGACGATCCAACGCCGAAACTAAAGCTTTC
GTCCATAGGCAGCAGCAATAGTGACGACGACCGCCGCCTGCCAGCCTGTG
TTCCCCCTCCTTATCGCGCCCCCGGGGTTCAGACCCTTATCCTGACGGCC
TAGATTCCTGTCAAGCTTGATCCCTTTTCTTTCGTGGTGATCGCCAGCCA
GCATATCTTCTCCTCTGGTCTTCTGAGTCCTTTAACTGGCTTCATTCTTA
CCAGCATCGCCTGCGTGCTGCGTGGTTAATCATCCATCGTCTTCTCTTGG
CTTCATAACGGTCTGGGAGCGGAACTTTACTCTTCCGCGACCGTTGTTTT
ATCGCCGAAGATGTTGAAACCGTTCCAAATCAGAGATCTTCATGGATCTC
CGTCACATACACCTGCAGAGGTGCCCTTGGCATCCACTCAACCCTTGACA
AGGGAGCCATCGTCACCTAGAGCTCGTCGGGGAATCGTACAGTTGTCTGC
TCCCCAGTATGATGATCTTGCATCGAATCACCCGCGGGCACGGCTGACTT
ATGTTGATGATGACGATGGGGAGATCATCACTGTATGTCTTATTGTATAT
ACTGCGTCCTTTTGGTACTAATCGGTCTTTACAGGTTGGATCGTCTCTCG
AACTCTCTCAGCGTCTCGATGAGCCCATTGACCCTGCAACTGCACACGAC
CCGATGCCGCAGGCAGCTATCTCCGAACCGATGCACCTCTTCGATATTCG
ACGCTCGAACTCAATAACCGAGTTGTGGAAGAAATTCCAGATAAAGCAAG
AAGGCAAGGATGCGGATACCCGGGCTGGATCACCGACTGTGGACGCCCCG
GCTGCTAGCGCTTCAGCAGAAGTAGGGTCAGGGACCGAGCAAGAGAACGT
TGAGGCTACGAGGAACGACGACACAGCGCCACTCATGGCCGCCTTTGAGG
CTGAGATGGCCAAGATTCTGGATGCTTCCAGGAATATACAAGAAAATGGC
ACTTCTGAAGAGCCTTCAGCTCCGGCTCAGGAGCCAGCGGGAACCGCAAG
GGGCAGGACTCCAAATCCCGCGGATGCATTCACTCTTGCGATGCAGAACC
TGCTTAGCGGAGCCGAGTTGCTCAGTTCTGGGGTGAGATCAAGTATACCC
GAGATTGAACGGCAACTGGAGAACGCCCAGAGGGCCCTTCCTGGAAATGT
CGGGTCCTCGGTACAAGGTGCTCTTGCGAGTTTGGAAGCCCAGTTGAGAC
AGCTTACCGGCTCTATCAACCACACGGTTGGTGGCGTGTCGACAGGAAAC
ATTCTCCAAGGTGAAATCCCCACAGCCACTGGCACCGTAGACAGTCTGCG
TGCAATGGCGTCGGAACTTGGAAATGTAGGGCATACCTTGTTCGAAGCGT
TCGAGTCGGAGTTTGGGTGCACTCGAACCGGCGGCCAACCACAATCTTCC
TCCGAACAAAGTCCAGATGGCCTCCGTCCCGACCATGCTGAACCTCCCAG
ACCGTCTGATGCCACTGCAGTTAATAGTGTGGTTCCCGACGTGGTAGATC
AGTCAACCCAGGATCGGGATCTTGGAAGCCACGAGACCCAATCCGGAGAG
AAAGAGCTAGGGTCGGAATCAGACTCCAAAAATGGCACCAAGAAAGCTGC
AGAGGCGGACGGTCCGGCTCGGCCAGGCGGCCCTAACCAGGCGCAGCCAG
ATGCATCTTCATACGTGCCTCATGCCCCTCGTGGACGTCACGGCCCTTTT
CCTTTCACACCCTACTTTCAACCACCACCCCCTCCTCCACCGCATCCTCA
TCCCCATCACCATTATCCGCCTCCGCCTCCACCACCTCCTCACCATCCTC
CTTTCTTTGGTCCGCCTCCTCATCACTTCCACCAGCCCTTCCCAGTTCCA
CATCCGCCGCCTTTCTGGCCGACACCCGAAAGTTTGAGTCATCCTCACTT
CCCTGCTGGGCCTCAGGTTCATCATCCACAACCCACGAGTACCCATGCAC
ATCCCTCCCAACACGCGGCCCGGCATTATAACCAATGTCGTCGTAGCCGT
GGTCCCACTAGTCATCAACATGTTCATGAACAAGGCCGTGGTGGAACCAA
TGATGTGCCATCATCTGGCCGAGATGCCACATCGACAGAAACACAAAGCC
CCACTAACACATCATTGTTCGTCGGAAATGTGGGCTTCAATGTTAGCGAG
AAGATGATCCGCGACGTTTTCGCCTCCAGGGGTTTTCTAGTAGATGTACA
TTTGCCTCTTGATGTCGGGACCGAAAAGCACGCTGGATTTGGCTACTTGT
TCTTCCCATCTGTCCCTGCGGCAAAGGCGGCCCTGGAGGCCTTGCAGGGT
ACGCATATTGATGGCCACGCAATTAACCTGGAGTTCAGTGACCAGACCCC
GGTCATTAAACTGCACCCTGAGGAACCTTCTCCTCAAGCAACATCAGACA
GTCCCATGCCTGTTGTTAGTGATCGGAAGTCCAATCCATATGAACTTCAA
GGGTCTACAGCTACACCCGCCAAGTTGGAGAAGGCTTCACTTGGTAGCCA
AGATGGATCCAAATCGCCCAGCGGTAAACGTGCCGCCCCTTTGACCGTGG
CGGACTTGTGTTCCAATGATAATCGCAATCCGGGCAACGCAGCGTCTGCC
AATAGTCTGGAAGACTCATCGTTGGGGGATTCCACGCGGCTGAATTCACT
CTACCCGTCCCTCTTGCCTGAAGGTGTCCCGAAGTCGGGGCCTTCTGAGC
CTGTTAGTCCTGCGTTTGATCGGATCCCCGAACTTACGCGTGAATTGGAA
GAGTGCCGCTTTCCCCCAGTCTCACAGCTCGAAGCGCACTTTTTGGCCGA
GCAGCAGAAGGAAGCGGCTTCATCCAACGTACAGACGAGGTCTGTCGGTA
AAGCACCAGAAGCTAAGAATCTGAACGGCAATGCGGCGCTGCAGGGGCTT
CCCGGCGCATATCCGCAGGAGGTCCGTGGGGACTCGTCGACACGACCTGG
ACAGTTCTCAGGAACCCGTAATCTGCATGGTGCACATGACAATGGGGAAT
CATCTTTTGGCCCTCGCCGCCATGTTAGACATTGGAAGAGCCAGCGACCC
CGCTCTGCTTGGCAAGATGATTTCTTGGGGTGGGACGCCCCTCGCGGCAT
GTTTGGCGGGAGACCGGAAGGTCGTCATCGTCACCGCGGTGGACGTCGCA
ACAGTTTTGAAAGCCCTTTATCCGAGACTCAAGTAGCGAATCCCAATGTC
AGACAACGCGAAATTGATGACTGCGTCTCTACCTTGGTGAGCTTGGGATA
TGGAGGAGCCAGCGACGGTGGCCATCAACGAATAGCGATTTATGCTGCGG
CTGCGGACGGCAGGGTATCGGATGCGATTGAGATGATCGAGGAAGAACGC
AAGGCATACGAACAACAAGGATCGACGATGTGATGACCAACGTGGTAATA
GTACTCTTTTTTCTTACAATTTGATATGGCCCAGACTCGTTGTGATCCCA
AGTAGCTGTGGACTTCGCGGTCTGTTTTGAGACTGATATTGCTGGAACGC
GTGTGCTTCGGGCGGAATACTCTACATATTCCCTACTCCATCACTAAATG
AGAAAAGTGAGAATATC back to topCoding sequence (CDS) from alignment at ch5:2560532..2564398- >KJC3_007465-T1 ID=KJC3_007465-T1|Name=KJC3_007465-T1|organism=Aspergillus niger KJC3|type=CDS|length=6042bp|location=Sequence derived from alignment at ch5:2560532..2564398- (Aspergillus niger KJC3)
GTTGGATCGTCTCTCGAACTCTCTCAGCGTCTCGATGAGCCCATTGACCC
TGCAACTGCACACGACCCGATGCCGCAGGCAGCTATCTCCGAACCGATGC
ACCTCTTCGATATTCGACGCTCGAACTCAATAACCGAGTTGTGGAAGAAA
TTCCAGATAAAGCAAGAAGGCAAGGATGCGGATACCCGGGCTGGATCACC
GACTGTGGACGCCCCGGCTGCTAGCGCTTCAGCAGAAGTAGGGTCAGGGA
CCGAGCAAGAGAACGTTGAGGCTACGAGGAACGACGACACAGCGCCACTC
ATGGCCGCCTTTGAGGCTGAGATGGCCAAGATTCTGGATGCTTCCAGGAA
TATACAAGAAAATGGCACTTCTGAAGAGCCTTCAGCTCCGGCTCAGGAGC
CAGCGGGAACCGCAAGGGGCAGGACTCCAAATCCCGCGGATGCATTCACT
CTTGCGATGCAGAACCTGCTTAGCGGAGCCGAGTTGCTCAGTTCTGGGGT
GAGATCAAGTATACCCGAGATTGAACGGCAACTGGAGAACGCCCAGAGGG
CCCTTCCTGGAAATGTCGGGTCCTCGGTACAAGGTGCTCTTGCGAGTTTG
GAAGCCCAGTTGAGACAGCTTACCGGCTCTATCAACCACACGGTTGGTGG
CGTGTCGACAGGAAACATTCTCCAAGGTGAAATCCCCACAGCCACTGGCA
CCGTAGACAGTCTGCGTGCAATGGCGTCGGAACTTGGAAATGTAGGGCAT
ACCTTGTTCGAAGCGTTCGAGTCGGAGTTTGGGTGCACTCGAACCGGCGG
CCAACCACAATCTTCCTCCGAACAAAGTCCAGATGGCCTCCGTCCCGACC
ATGCTGAACCTCCCAGACCGTCTGATGCCACTGCAGTTAATAGTGTGGTT
CCCGACGTGGTAGATCAGTCAACCCAGGATCGGGATCTTGGAAGCCACGA
GACCCAATCCGGAGAGAAAGAGCTAGGGTCGGAATCAGACTCCAAAAATG
GCACCAAGAAAGCTGCAGAGGCGGACGGTCCGGCTCGGCCAGGCGGCCCT
AACCAGGCGCAGCCAGATGCATCTTCATACGTGCCTCATGCCCCTCGTGG
ACGTCACGGCCCTTTTCCTTTCACACCCTACTTTCAACCACCACCCCCTC
CTCCACCGCATCCTCATCCCCATCACCATTATCCGCCTCCGCCTCCACCA
CCTCCTCACCATCCTCCTTTCTTTGGTCCGCCTCCTCATCACTTCCACCA
GCCCTTCCCAGTTCCACATCCGCCGCCTTTCTGGCCGACACCCGAAAGTT
TGAGTCATCCTCACTTCCCTGCTGGGCCTCAGGTTCATCATCCACAACCC
ACGAGTACCCATGCACATCCCTCCCAACACGCGGCCCGGCATTATAACCA
ATGTCGTCGTAGCCGTGGTCCCACTAGTCATCAACATGTTCATGAACAAG
GCCGTGGTGGAACCAATGATGTGCCATCATCTGGCCGAGATGCCACATCG
ACAGAAACACAAAGCCCCACTAACACATCATTGTTCGTCGGAAATGTGGG
CTTCAATGTTAGCGAGAAGATGATCCGCGACGTTTTCGCCTCCAGGGGTT
TTCTAGTAGATGTACATTTGCCTCTTGATGTCGGGACCGAAAAGCACGCT
GGATTTGGCTACTTGTTCTTCCCATCTGTCCCTGCGGCAAAGGCGGCCCT
GGAGGCCTTGCAGGGTACGCATATTGATGGCCACGCAATTAACCTGGAGT
TCAGTGACCAGACCCCGGTCATTAAACTGCACCCTGAGGAACCTTCTCCT
CAAGCAACATCAGACAGTCCCATGCCTGTTGTTAGTGATCGGAAGTCCAA
TCCATATGAACTTCAAGGGTCTACAGCTACACCCGCCAAGTTGGAGAAGG
CTTCACTTGGTAGCCAAGATGGATCCAAATCGCCCAGCGGTAAACGTGCC
GCCCCTTTGACCGTGGCGGACTTGTGTTCCAATGATAATCGCAATCCGGG
CAACGCAGCGTCTGCCAATAGTCTGGAAGACTCATCGTTGGGGGATTCCA
CGCGGCTGAATTCACTCTACCCGTCCCTCTTGCCTGAAGGTGTCCCGAAG
TCGGGGCCTTCTGAGCCTGTTAGTCCTGCGTTTGATCGGATCCCCGAACT
TACGCGTGAATTGGAAGAGTGCCGCTTTCCCCCAGTCTCACAGCTCGAAG
CGCACTTTTTGGCCGAGCAGCAGAAGGAAGCGGCTTCATCCAACGTACAG
ACGAGGTCTGTCGGTAAAGCACCAGAAGCTAAGAATCTGAACGGCAATGC
GGCGCTGCAGGGGCTTCCCGGCGCATATCCGCAGGAGGTCCGTGGGGACT
CGTCGACACGACCTGGACAGTTCTCAGGAACCCGTAATCTGCATGGTGCA
CATGACAATGGGGAATCATCTTTTGGCCCTCGCCGCCATGTTAGACATTG
GAAGAGCCAGCGACCCCGCTCTGCTTGGCAAGATGATTTCTTGGGGTGGG
ACGCCCCTCGCGGCATGTTTGGCGGGAGACCGGAAGGTCGTCATCGTCAC
CGCGGTGGACGTCGCAACAGTTTTGAAAGCCCTTTATCCGAGACTCAAGT
AGCGAATCCCAATGTCAGACAACGCGAAATTGATGACTGCGTCTCTACCT
TGGTGAGCTTGGGATATGGAGGAGCCAGCGACGGTGGCCATCAACGAATA
GCGATTTATGCTGCGGCTGCGGACGGCAGGGTATCGGATGCGATTGAGAT
GATCGAGGAAGAACGCAAGGCATACGAACAACAAGGATCGACGATGTGAA
TGTTGAAACCGTTCCAAATCAGAGATCTTCATGGATCTCCGTCACATACA
CCTGCAGAGGTGCCCTTGGCATCCACTCAACCCTTGACAAGGGAGCCATC
GTCACCTAGAGCTCGTCGGGGAATCGTACAGTTGTCTGCTCCCCAGTATG
ATGATCTTGCATCGAATCACCCGCGGGCACGGCTGACTTATGTTGATGAT
GACGATGGGGAGATCATCACTGTTGGATCGTCTCTCGAACTCTCTCAGCG
TCTCGATGAGCCCATTGACCCTGCAACTGCACACGACCCGATGCCGCAGG
CAGCTATCTCCGAACCGATGCACCTCTTCGATATTCGACGCTCGAACTCA
ATAACCGAGTTGTGGAAGAAATTCCAGATAAAGCAAGAAGGCAAGGATGC
GGATACCCGGGCTGGATCACCGACTGTGGACGCCCCGGCTGCTAGCGCTT
CAGCAGAAGTAGGGTCAGGGACCGAGCAAGAGAACGTTGAGGCTACGAGG
AACGACGACACAGCGCCACTCATGGCCGCCTTTGAGGCTGAGATGGCCAA
GATTCTGGATGCTTCCAGGAATATACAAGAAAATGGCACTTCTGAAGAGC
CTTCAGCTCCGGCTCAGGAGCCAGCGGGAACCGCAAGGGGCAGGACTCCA
AATCCCGCGGATGCATTCACTCTTGCGATGCAGAACCTGCTTAGCGGAGC
CGAGTTGCTCAGTTCTGGGGTGAGATCAAGTATACCCGAGATTGAACGGC
AACTGGAGAACGCCCAGAGGGCCCTTCCTGGAAATGTCGGGTCCTCGGTA
CAAGGTGCTCTTGCGAGTTTGGAAGCCCAGTTGAGACAGCTTACCGGCTC
TATCAACCACACGGTTGGTGGCGTGTCGACAGGAAACATTCTCCAAGGTG
AAATCCCCACAGCCACTGGCACCGTAGACAGTCTGCGTGCAATGGCGTCG
GAACTTGGAAATGTAGGGCATACCTTGTTCGAAGCGTTCGAGTCGGAGTT
TGGGTGCACTCGAACCGGCGGCCAACCACAATCTTCCTCCGAACAAAGTC
CAGATGGCCTCCGTCCCGACCATGCTGAACCTCCCAGACCGTCTGATGCC
ACTGCAGTTAATAGTGTGGTTCCCGACGTGGTAGATCAGTCAACCCAGGA
TCGGGATCTTGGAAGCCACGAGACCCAATCCGGAGAGAAAGAGCTAGGGT
CGGAATCAGACTCCAAAAATGGCACCAAGAAAGCTGCAGAGGCGGACGGT
CCGGCTCGGCCAGGCGGCCCTAACCAGGCGCAGCCAGATGCATCTTCATA
CGTGCCTCATGCCCCTCGTGGACGTCACGGCCCTTTTCCTTTCACACCCT
ACTTTCAACCACCACCCCCTCCTCCACCGCATCCTCATCCCCATCACCAT
TATCCGCCTCCGCCTCCACCACCTCCTCACCATCCTCCTTTCTTTGGTCC
GCCTCCTCATCACTTCCACCAGCCCTTCCCAGTTCCACATCCGCCGCCTT
TCTGGCCGACACCCGAAAGTTTGAGTCATCCTCACTTCCCTGCTGGGCCT
CAGGTTCATCATCCACAACCCACGAGTACCCATGCACATCCCTCCCAACA
CGCGGCCCGGCATTATAACCAATGTCGTCGTAGCCGTGGTCCCACTAGTC
ATCAACATGTTCATGAACAAGGCCGTGGTGGAACCAATGATGTGCCATCA
TCTGGCCGAGATGCCACATCGACAGAAACACAAAGCCCCACTAACACATC
ATTGTTCGTCGGAAATGTGGGCTTCAATGTTAGCGAGAAGATGATCCGCG
ACGTTTTCGCCTCCAGGGGTTTTCTAGTAGATGTACATTTGCCTCTTGAT
GTCGGGACCGAAAAGCACGCTGGATTTGGCTACTTGTTCTTCCCATCTGT
CCCTGCGGCAAAGGCGGCCCTGGAGGCCTTGCAGGGTACGCATATTGATG
GCCACGCAATTAACCTGGAGTTCAGTGACCAGACCCCGGTCATTAAACTG
CACCCTGAGGAACCTTCTCCTCAAGCAACATCAGACAGTCCCATGCCTGT
TGTTAGTGATCGGAAGTCCAATCCATATGAACTTCAAGGGTCTACAGCTA
CACCCGCCAAGTTGGAGAAGGCTTCACTTGGTAGCCAAGATGGATCCAAA
TCGCCCAGCGGTAAACGTGCCGCCCCTTTGACCGTGGCGGACTTGTGTTC
CAATGATAATCGCAATCCGGGCAACGCAGCGTCTGCCAATAGTCTGGAAG
ACTCATCGTTGGGGGATTCCACGCGGCTGAATTCACTCTACCCGTCCCTC
TTGCCTGAAGGTGTCCCGAAGTCGGGGCCTTCTGAGCCTGTTAGTCCTGC
GTTTGATCGGATCCCCGAACTTACGCGTGAATTGGAAGAGTGCCGCTTTC
CCCCAGTCTCACAGCTCGAAGCGCACTTTTTGGCCGAGCAGCAGAAGGAA
GCGGCTTCATCCAACGTACAGACGAGGTCTGTCGGTAAAGCACCAGAAGC
TAAGAATCTGAACGGCAATGCGGCGCTGCAGGGGCTTCCCGGCGCATATC
CGCAGGAGGTCCGTGGGGACTCGTCGACACGACCTGGACAGTTCTCAGGA
ACCCGTAATCTGCATGGTGCACATGACAATGGGGAATCATCTTTTGGCCC
TCGCCGCCATGTTAGACATTGGAAGAGCCAGCGACCCCGCTCTGCTTGGC
AAGATGATTTCTTGGGGTGGGACGCCCCTCGCGGCATGTTTGGCGGGAGA
CCGGAAGGTCGTCATCGTCACCGCGGTGGACGTCGCAACAGTTTTGAAAG
CCCTTTATCCGAGACTCAAGTAGCGAATCCCAATGTCAGACAACGCGAAA
TTGATGACTGCGTCTCTACCTTGGTGAGCTTGGGATATGGAGGAGCCAGC
GACGGTGGCCATCAACGAATAGCGATTTATGCTGCGGCTGCGGACGGCAG
GGTATCGGATGCGATTGAGATGATCGAGGAAGAACGCAAGGCATACGAAC
AACAAGGATCGACGATGTGAATGTTGAAACCGTTCCAAATCAGAGATCTT
CATGGATCTCCGTCACATACACCTGCAGAGGTGCCCTTGGCATCCACTCA
ACCCTTGACAAGGGAGCCATCGTCACCTAGAGCTCGTCGGGGAATCGTAC
AGTTGTCTGCTCCCCAGTATGATGATCTTGCATCGAATCACCCGCGGGCA
CGGCTGACTTATGTTGATGATGACGATGGGGAGATCATCACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007465-T1.utr3p1 | KJC3_007465-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007465-T1.utr5p1 | KJC3_007465-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2560532..2564398 - |
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