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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2646824..2648331- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007498-T2 ID=KJC3_007498-T2|Name=KJC3_007498-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1508bp|location=Sequence derived from alignment at ch5:2646824..2648331- (Aspergillus niger KJC3)
CTGGCGGAATGAATGCTTTCACCCGTTTTCCTTCTTTTCTTCTCGCGCTA
CAAGCTTCGCAATCCGATTCTCACACCCAGAAATTCCAGTCCAGAATGTC
ACAGCGGATGTCAGAAGTATCCTGGCCGGCGGGAATTCCACAAATCCGCC
TGCATCTGACAGATTTGGACCCGGAAGAGCTCGCGGAAGAGGCCAAGGGA
TGGTTGCTATTCGTACGGGTAGAGGGGATTCTGCGGAAGCACACATTCCT
ATCATGATATGTCGCACTGACGGTTTCCAATCACTTTCTCGCCGGCTGCA
GGAAGAATCCCACCCGACGTCAAATACCGAAGATGGGCTTCACCAACGAC
GAGCCCTAATCGAGAAATGGGCTACCGCAAGCCAGGAGTTCCGCGAGGTC
CGTATAACCCCAGAAGTCTCCAGATTCTTCCTCTTGTCATCCTCTTATCT
GTCCCTCTCTTGCCTTCTTCATCTTCAGCATGAATGAGCATGAGTGGAAA
AGGAGGAAGAAAAGAAAAAAACAAAAGAGGAAGAAGAAGATTGAAGGGTA
ACACTGCCGCAGTCCTACCATAGTCGTTCCGCAGGATACACCTCGGCTGT
CGACTACCCGGCCCAGGTACTCTCGCAGCTCGCCCCGAGACCCAACAAAC
GCTTCTTGTGTTTGGCCCCAATAAACCGGGAGACCCATCCGCGCAGCTAC
ATCCACCTCGTGAAGTTTCTTATTCTGTTATACGTCCACCAAGATGAATG
GAGCAGGCGGCACCCCTTCGACCTGCGTGGGGCGGGCGACGCCCCCCGCT
GCAACATTCCAGAGCTGCTTGGCTGCCCTCCGGCGGCCACAGCCACCACC
ACCCTCAGCGAGGTCCTCCCGGCGCTGTATCTCGCCCCGGCGGATTACCG
CGCCATCTCCATGACCCGCCAGGGCATGGTGGTATTCGCCGACGGGCCGG
ACCTCACGTGGTTCGTCATCGATGCGCCGGGGCTGGCCACGGGGCGCCTC
ACCCTGGTGGAGTATGGCTCCAATGGCGACGTCCGCGTCTCGACCCTCCG
TCGACCCTGGAATATGGGGCAAACCATGACCTTCGAGCAGGTCCTGGGGA
AGGACCTGGACGAGATTGCCGAGTCGGGGATCGGGGGCCCGCCGCAGTAT
AATGAACCGTACGTTCCTTCTTTCCCAAACATTGCTGCTGACTTCTCGTC
TTCTGATGAGACCTTTCTTGATTAATGAGATCGATATAGCTTGGACATGA
ACCTTCCCATACTCGAGCTCTTGGAGTCAACCCGACTGAACAACAAGTTC
CTCTTCCCGGGTTACGGATGTCGGGACCTCTGGGTCCGCATTATCGAGCA
GAGTGCACCTGGATATCTGGAGCTGGAGGCCCAAGGGCGGGAGGTGGAAT
TCGAGCTGGATGATCTGCTAGTCGTTGATCCATAAAAATTTACCAGGTTG
CCAAATATAGACTCCTGCATGAAATAGTGCCTTATATTTACAGTTAATTA
AAAAGAAG back to topCoding sequence (CDS) from alignment at ch5:2646824..2648331- >KJC3_007498-T2 ID=KJC3_007498-T2|Name=KJC3_007498-T2|organism=Aspergillus niger KJC3|type=CDS|length=4392bp|location=Sequence derived from alignment at ch5:2646824..2648331- (Aspergillus niger KJC3)
CTTGGACATGAACCTTCCCATACTCGAGCTCTTGGAGTCAACCCGACTGA
ACAACAAGTTCCTCTTCCCGGGTTACGGATGTCGGGACCTCTGGGTCCGC
ATTATCGAGCAGAGTGCACCTGGATATCTGGAGCTGGAGGCCCAAGGGCG
GGAGGTGGAATTCGAGCTGGATGATCTGCTAGTCGTTGATCCATAATCCT
ACCATAGTCGTTCCGCAGGATACACCTCGGCTGTCGACTACCCGGCCCAG
GTACTCTCGCAGCTCGCCCCGAGACCCAACAAACGCTTCTTGTGTTTGGC
CCCAATAAACCGGGAGACCCATCCGCGCAGCTACATCCACCTCGTGAAGT
TTCTTATTCTGTTATACGTCCACCAAGATGAATGGAGCAGGCGGCACCCC
TTCGACCTGCGTGGGGCGGGCGACGCCCCCCGCTGCAACATTCCAGAGCT
GCTTGGCTGCCCTCCGGCGGCCACAGCCACCACCACCCTCAGCGAGGTCC
TCCCGGCGCTGTATCTCGCCCCGGCGGATTACCGCGCCATCTCCATGACC
CGCCAGGGCATGGTGGTATTCGCCGACGGGCCGGACCTCACGTGGTTCGT
CATCGATGCGCCGGGGCTGGCCACGGGGCGCCTCACCCTGGTGGAGTATG
GCTCCAATGGCGACGTCCGCGTCTCGACCCTCCGTCGACCCTGGAATATG
GGGCAAACCATGACCTTCGAGCAGGTCCTGGGGAAGGACCTGGACGAGAT
TGCCGAGTCGGGGATCGGGGGCCCGCCGCAGTATAATGAACCGAAGAATC
CCACCCGACGTCAAATACCGAAGATGGGCTTCACCAACGACGAGCCCTAA
TCGAGAAATGGGCTACCGCAAGCCAGGAGTTCCGCGAGATGAATGCTTTC
ACCCGTTTTCCTTCTTTTCTTCTCGCGCTACAAGCTTCGCAATCCGATTC
TCACACCCAGAAATTCCAGTCCAGAATGTCACAGCGGATGTCAGAAGTAT
CCTGGCCGGCGGGAATTCCACAAATCCGCCTGCATCTGACAGATTTGGAC
CCGGAAGAGCTCGCGGAAGAGGCCAAGGGATGGTTGCTATTCGTACGGCT
TGGACATGAACCTTCCCATACTCGAGCTCTTGGAGTCAACCCGACTGAAC
AACAAGTTCCTCTTCCCGGGTTACGGATGTCGGGACCTCTGGGTCCGCAT
TATCGAGCAGAGTGCACCTGGATATCTGGAGCTGGAGGCCCAAGGGCGGG
AGGTGGAATTCGAGCTGGATGATCTGCTAGTCGTTGATCCATAATCCTAC
CATAGTCGTTCCGCAGGATACACCTCGGCTGTCGACTACCCGGCCCAGGT
ACTCTCGCAGCTCGCCCCGAGACCCAACAAACGCTTCTTGTGTTTGGCCC
CAATAAACCGGGAGACCCATCCGCGCAGCTACATCCACCTCGTGAAGTTT
CTTATTCTGTTATACGTCCACCAAGATGAATGGAGCAGGCGGCACCCCTT
CGACCTGCGTGGGGCGGGCGACGCCCCCCGCTGCAACATTCCAGAGCTGC
TTGGCTGCCCTCCGGCGGCCACAGCCACCACCACCCTCAGCGAGGTCCTC
CCGGCGCTGTATCTCGCCCCGGCGGATTACCGCGCCATCTCCATGACCCG
CCAGGGCATGGTGGTATTCGCCGACGGGCCGGACCTCACGTGGTTCGTCA
TCGATGCGCCGGGGCTGGCCACGGGGCGCCTCACCCTGGTGGAGTATGGC
TCCAATGGCGACGTCCGCGTCTCGACCCTCCGTCGACCCTGGAATATGGG
GCAAACCATGACCTTCGAGCAGGTCCTGGGGAAGGACCTGGACGAGATTG
CCGAGTCGGGGATCGGGGGCCCGCCGCAGTATAATGAACCGAAGAATCCC
ACCCGACGTCAAATACCGAAGATGGGCTTCACCAACGACGAGCCCTAATC
GAGAAATGGGCTACCGCAAGCCAGGAGTTCCGCGAGATGAATGCTTTCAC
CCGTTTTCCTTCTTTTCTTCTCGCGCTACAAGCTTCGCAATCCGATTCTC
ACACCCAGAAATTCCAGTCCAGAATGTCACAGCGGATGTCAGAAGTATCC
TGGCCGGCGGGAATTCCACAAATCCGCCTGCATCTGACAGATTTGGACCC
GGAAGAGCTCGCGGAAGAGGCCAAGGGATGGTTGCTATTCGTACGGCTTG
GACATGAACCTTCCCATACTCGAGCTCTTGGAGTCAACCCGACTGAACAA
CAAGTTCCTCTTCCCGGGTTACGGATGTCGGGACCTCTGGGTCCGCATTA
TCGAGCAGAGTGCACCTGGATATCTGGAGCTGGAGGCCCAAGGGCGGGAG
GTGGAATTCGAGCTGGATGATCTGCTAGTCGTTGATCCATAATCCTACCA
TAGTCGTTCCGCAGGATACACCTCGGCTGTCGACTACCCGGCCCAGGTAC
TCTCGCAGCTCGCCCCGAGACCCAACAAACGCTTCTTGTGTTTGGCCCCA
ATAAACCGGGAGACCCATCCGCGCAGCTACATCCACCTCGTGAAGTTTCT
TATTCTGTTATACGTCCACCAAGATGAATGGAGCAGGCGGCACCCCTTCG
ACCTGCGTGGGGCGGGCGACGCCCCCCGCTGCAACATTCCAGAGCTGCTT
GGCTGCCCTCCGGCGGCCACAGCCACCACCACCCTCAGCGAGGTCCTCCC
GGCGCTGTATCTCGCCCCGGCGGATTACCGCGCCATCTCCATGACCCGCC
AGGGCATGGTGGTATTCGCCGACGGGCCGGACCTCACGTGGTTCGTCATC
GATGCGCCGGGGCTGGCCACGGGGCGCCTCACCCTGGTGGAGTATGGCTC
CAATGGCGACGTCCGCGTCTCGACCCTCCGTCGACCCTGGAATATGGGGC
AAACCATGACCTTCGAGCAGGTCCTGGGGAAGGACCTGGACGAGATTGCC
GAGTCGGGGATCGGGGGCCCGCCGCAGTATAATGAACCGAAGAATCCCAC
CCGACGTCAAATACCGAAGATGGGCTTCACCAACGACGAGCCCTAATCGA
GAAATGGGCTACCGCAAGCCAGGAGTTCCGCGAGATGAATGCTTTCACCC
GTTTTCCTTCTTTTCTTCTCGCGCTACAAGCTTCGCAATCCGATTCTCAC
ACCCAGAAATTCCAGTCCAGAATGTCACAGCGGATGTCAGAAGTATCCTG
GCCGGCGGGAATTCCACAAATCCGCCTGCATCTGACAGATTTGGACCCGG
AAGAGCTCGCGGAAGAGGCCAAGGGATGGTTGCTATTCGTACGGCTTGGA
CATGAACCTTCCCATACTCGAGCTCTTGGAGTCAACCCGACTGAACAACA
AGTTCCTCTTCCCGGGTTACGGATGTCGGGACCTCTGGGTCCGCATTATC
GAGCAGAGTGCACCTGGATATCTGGAGCTGGAGGCCCAAGGGCGGGAGGT
GGAATTCGAGCTGGATGATCTGCTAGTCGTTGATCCATAATCCTACCATA
GTCGTTCCGCAGGATACACCTCGGCTGTCGACTACCCGGCCCAGGTACTC
TCGCAGCTCGCCCCGAGACCCAACAAACGCTTCTTGTGTTTGGCCCCAAT
AAACCGGGAGACCCATCCGCGCAGCTACATCCACCTCGTGAAGTTTCTTA
TTCTGTTATACGTCCACCAAGATGAATGGAGCAGGCGGCACCCCTTCGAC
CTGCGTGGGGCGGGCGACGCCCCCCGCTGCAACATTCCAGAGCTGCTTGG
CTGCCCTCCGGCGGCCACAGCCACCACCACCCTCAGCGAGGTCCTCCCGG
CGCTGTATCTCGCCCCGGCGGATTACCGCGCCATCTCCATGACCCGCCAG
GGCATGGTGGTATTCGCCGACGGGCCGGACCTCACGTGGTTCGTCATCGA
TGCGCCGGGGCTGGCCACGGGGCGCCTCACCCTGGTGGAGTATGGCTCCA
ATGGCGACGTCCGCGTCTCGACCCTCCGTCGACCCTGGAATATGGGGCAA
ACCATGACCTTCGAGCAGGTCCTGGGGAAGGACCTGGACGAGATTGCCGA
GTCGGGGATCGGGGGCCCGCCGCAGTATAATGAACCGAAGAATCCCACCC
GACGTCAAATACCGAAGATGGGCTTCACCAACGACGAGCCCTAATCGAGA
AATGGGCTACCGCAAGCCAGGAGTTCCGCGAGATGAATGCTTTCACCCGT
TTTCCTTCTTTTCTTCTCGCGCTACAAGCTTCGCAATCCGATTCTCACAC
CCAGAAATTCCAGTCCAGAATGTCACAGCGGATGTCAGAAGTATCCTGGC
CGGCGGGAATTCCACAAATCCGCCTGCATCTGACAGATTTGGACCCGGAA
GAGCTCGCGGAAGAGGCCAAGGGATGGTTGCTATTCGTACGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007498-T2.utr3p1 | KJC3_007498-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007498-T2.utr5p1 | KJC3_007498-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2646824..2648331 - |
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