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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2677656..2678504+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007512-T1 ID=KJC3_007512-T1|Name=KJC3_007512-T1|organism=Aspergillus niger KJC3|type=mRNA|length=849bp|location=Sequence derived from alignment at ch5:2677656..2678504+ (Aspergillus niger KJC3)
ATGCCGAAGACATTCCAGAAAGTTACCAAGCATATTGCCAAGAAGCGAGG
CGCTGTTGAGGCTCTCCACGAGTTCAGCAGAGATGCCAGAAGACTGCGCC
GAGCCAATGCCAGAGATGATCGAGTCGCTCGTGTCTCCGCCAACATGTCG
CGCGCCAGACAGACATACGGTATGGCAGTCTTCCTTGGGACTCTGTGCTT
CGATGTTGCGATAACTAATTTTTCTCTTGTTTAGTGGAACGGATCGCCTA
CTTCCACGAGAGTATCCCAGAAGGCCAAGCTCCGATGTCAGAGGATGAAA
TGAAGGATATTGTAGTCAGGTATGCCACACTGTCTGTCAACCGTGAAAAC
CGCACATACTTACGATCGCCAACTATAGATACATTAACCGCAGCGTGCCC
GAGATCGAACAACTACAGAGCGAGAGGCGGAAAGGCAGGCCGCCCAGCAA
GCGCGAAGAAGCATTGTTGCAGCGAACCGACGTTGAGAATCGCGAGTTCA
AGACGGGATTTTGGATGCCCGACTTTAGCGATGAGGGTGTGCTCAAGGCC
CTCGCCTCGTGGAACGGAGACTGGTCTGGACTGAGCACGATGAAGTTCAT
TCGTATCACTAAGGACGGAGCGAAACAACCTTCAGCATTCCCGCCGAAGG
GCATGTCATGAAACGTCAAAAGTTCTGGTTTTCTTTCTGCTTTTTCATTC
TTTGGGAGATCGGAGATTCGTAGTATGCGCGGAGATGGATGGCATAACGG
CGTTACGATTGCACATAGATTTTTACAAAAGCTGTTGAATCATTTTTGTA
GCTGTATAATGTACCCTAAAGCCTTGAGAGTAACCAGGGTGAGTCTCAC back to topCoding sequence (CDS) from alignment at ch5:2677656..2678504+ >KJC3_007512-T1 ID=KJC3_007512-T1|Name=KJC3_007512-T1|organism=Aspergillus niger KJC3|type=CDS|length=1611bp|location=Sequence derived from alignment at ch5:2677656..2678504+ (Aspergillus niger KJC3)
ATGCCGAAGACATTCCAGAAAGTTACCAAGCATATTGCCAAGAAGCGAGG
CGCTGTTGAGGCTCTCCACGAGTTCAGCAGAGATGCCAGAAGACTGCGCC
GAGCCAATGCCAGAGATGATCGAGTCGCTCGTGTCTCCGCCAACATGTCG
CGCGCCAGACAGACATACGTGGAACGGATCGCCTACTTCCACGAGAGTAT
CCCAGAAGGCCAAGCTCCGATGTCAGAGGATGAAATGAAGGATATTGTAG
TCAGATACATTAACCGCAGCGTGCCCGAGATCGAACAACTACAGAGCGAG
AGGCGGAAAGGCAGGCCGCCCAGCAAGCGCGAAGAAGCATTGTTGCAGCG
AACCGACGTTGAGAATCGCGAGTTCAAGACGGGATTTTGGATGCCCGACT
TTAGCGATGAGGGTGTGCTCAAGGCCCTCGCCTCGTGGAACGGAGACTGG
TCTGGACTGAGCACGATGAAGTTCATTCGTATCACTAAGGACGGAGCGAA
ACAACCTTCAGCATTCCCGCCGAAGGGCATGTCATGAATGCCGAAGACAT
TCCAGAAAGTTACCAAGCATATTGCCAAGAAGCGAGGCGCTGTTGAGGCT
CTCCACGAGTTCAGCAGAGATGCCAGAAGACTGCGCCGAGCCAATGCCAG
AGATGATCGAGTCGCTCGTGTCTCCGCCAACATGTCGCGCGCCAGACAGA
CATACGTGGAACGGATCGCCTACTTCCACGAGAGTATCCCAGAAGGCCAA
GCTCCGATGTCAGAGGATGAAATGAAGGATATTGTAGTCAGATACATTAA
CCGCAGCGTGCCCGAGATCGAACAACTACAGAGCGAGAGGCGGAAAGGCA
GGCCGCCCAGCAAGCGCGAAGAAGCATTGTTGCAGCGAACCGACGTTGAG
AATCGCGAGTTCAAGACGGGATTTTGGATGCCCGACTTTAGCGATGAGGG
TGTGCTCAAGGCCCTCGCCTCGTGGAACGGAGACTGGTCTGGACTGAGCA
CGATGAAGTTCATTCGTATCACTAAGGACGGAGCGAAACAACCTTCAGCA
TTCCCGCCGAAGGGCATGTCATGAATGCCGAAGACATTCCAGAAAGTTAC
CAAGCATATTGCCAAGAAGCGAGGCGCTGTTGAGGCTCTCCACGAGTTCA
GCAGAGATGCCAGAAGACTGCGCCGAGCCAATGCCAGAGATGATCGAGTC
GCTCGTGTCTCCGCCAACATGTCGCGCGCCAGACAGACATACGTGGAACG
GATCGCCTACTTCCACGAGAGTATCCCAGAAGGCCAAGCTCCGATGTCAG
AGGATGAAATGAAGGATATTGTAGTCAGATACATTAACCGCAGCGTGCCC
GAGATCGAACAACTACAGAGCGAGAGGCGGAAAGGCAGGCCGCCCAGCAA
GCGCGAAGAAGCATTGTTGCAGCGAACCGACGTTGAGAATCGCGAGTTCA
AGACGGGATTTTGGATGCCCGACTTTAGCGATGAGGGTGTGCTCAAGGCC
CTCGCCTCGTGGAACGGAGACTGGTCTGGACTGAGCACGATGAAGTTCAT
TCGTATCACTAAGGACGGAGCGAAACAACCTTCAGCATTCCCGCCGAAGG
GCATGTCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007512-T1.utr3p1 | KJC3_007512-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021346 |
| DBxref | InterPro:IPR038356 |
| DBxref | PFAM:PF11176 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2677656..2678504 + |
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