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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2682083..2684045- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007515-T1 ID=KJC3_007515-T1|Name=KJC3_007515-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1963bp|location=Sequence derived from alignment at ch5:2682083..2684045- (Aspergillus niger KJC3)
TGACGCGTGGGGTTAATGAGTTGACGATAATGGATGTTGATTGAAGGCGC
TCATGCAACTCACTACAGCTTGAGCACTACGTCAATATTCGGAATGCCTC
ACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGATGAACTT
CTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGGAGGCCAA
TGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGACGACGATG
ATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGCTTCCTCT
GCTCCGGAGTAAGTATACATGATGTGATATAATTCGAGGGAGGGGGCATT
AACCTGAAATTTACCAGACCTGCTGCTGCTCCGGGACCCCAGGTTGATAC
CGATACAATGCTTGCGTTCTATCAACGCCTCTTTCCCTTCCGCTATCTAT
TCCAATGGTTGAACCATGGCATTGTTCCTTCCCCCGACTTCGGAAACCGT
GAATTCGCCCTTACCCTTCAAAACGATGCCTACCTGCGATATCAGTCATA
TGCGACCGCGGATCTGTGAGTCGAAGAGTCCTTCATCGCTGTTTCAAGGC
TCTAACGTTCCCCATCTTATAGTTTCCGGAAAGATATCCTAAAAATGAAC
CCATCTCGGTTTGAAATCGGGCCTGTCTACAACACGAATCCGCGAGACAG
GAAGACGCTCCGAGGTGGCCAGATGAAGCCGATTGCCAAAGAATTAGTAT
TCGATATCGACCTTACGGATTACGATGACATCAGATCCTGTTGTGAGAAG
GCAAACATTTGTAGCAAGTGCTGGGCTTTTGTCACCATGGCAATGAAAGT
CGTCGACACGGCGCTACGCGAAGATTTCGGTTTCGAGCATATATTATGGG
TCTATTCTGGTCGTCGTGGTGCCCACGCCTGGGTTTGCGATCCCCGTGCA
CGCAACCTTCCAGATGATCGGAGAAGAGCCATCGCGGGCTACTTAGATGT
CATCCGAGGAGGAAATTCGAGCGGAAAGCGTGTTAATCTCAAGCGGCCTC
TGCATCCACACATGTCTCGCAGCCTCGAAATTCTTAAACCGTACTTCGCT
CAAACTACGTTGGTGGACCAGGAAACATTTGGGAGTTCAGAGCAAGCGCA
ACGTCTTCTTTCTTTGCTGCCCGACAAGGGGTTGAACGAATCCTTAAGGA
AGAGATGGGAGTCTTCGCCCGACCGCAGCAGTGCCAATAAGTGGGCGGAT
ATCGACGCCTTGGCCAAGACAGGCAAGAGCAGCACTCTCAACCCTACTAC
ACTGCGAGATGCCAAGCAAGACATTGTTCTCGAGTACACATATCCGCGCC
TGGATTCTGAAGTTAGCAAAAAGATGATTCACTTGCTAAAGAGTCCATTT
GTCATTCACCCTGGCACTGGTCGCGTGTGTGTTCCGATAGACGCCCGAAA
GGCGGAACAATTCGACCCCCTCTCGGTACCTACAGTTTCGGAACTGCTTG
CGGAGATCGATGCGTGGGATGCGGAGCATCCAAGCACCAATGCAGGTCCG
GAGGTAGCAGATGGCGAAGGTAGTGTACCCGACTCCGATGCTAGGGGTAG
TCGCAGACTGCAAGACTATGAAAAGACGAGTCTGAAGCCGTACGTCGACT
ATTTCCGCTCATTCATTGCCGGGCTTCTGAAGGAAGAGCGTACGGGCAAG
CGGGAAAGGAACGACGATGCGACTGAGGTCAAGACCGAGAGCATGGAGTT
CTAGACAATTCCAAGTCTGACAATTTTGTGTTGTTGCGCGTTTGACTTTG
GTCATTGATTTGGATTAGCACGTCGGATATGATATATTCATGGGCAACGG
GATTGGCGTCATTGTGCATTGCAAAGGTTGGACATGCTGGAGTTACTTTT
CTTCTTTTACGTTACTAGAACCTTATTCATCATTCTACGTAAATAATCTG
TCTGTTTTTCCGC back to topCoding sequence (CDS) from alignment at ch5:2682083..2684045- >KJC3_007515-T1 ID=KJC3_007515-T1|Name=KJC3_007515-T1|organism=Aspergillus niger KJC3|type=CDS|length=4815bp|location=Sequence derived from alignment at ch5:2682083..2684045- (Aspergillus niger KJC3)
TTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGGTTTGAAATCGGGC
CTGTCTACAACACGAATCCGCGAGACAGGAAGACGCTCCGAGGTGGCCAG
ATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCGACCTTACGGATTA
CGATGACATCAGATCCTGTTGTGAGAAGGCAAACATTTGTAGCAAGTGCT
GGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACACGGCGCTACGCGAA
GATTTCGGTTTCGAGCATATATTATGGGTCTATTCTGGTCGTCGTGGTGC
CCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTTCCAGATGATCGGA
GAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGGAGGAAATTCGAGC
GGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCACACATGTCTCGCAG
CCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACGTTGGTGGACCAGG
AAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCTTTCTTTGCTGCCC
GACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGGAGTCTTCGCCCGA
CCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCCTTGGCCAAGACAG
GCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGATGCCAAGCAAGAC
ATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTGAAGTTAGCAAAAA
GATGATTCACTTGCTAAAGAGTCCATTTGTCATTCACCCTGGCACTGGTC
GCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACAATTCGACCCCCTC
TCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCGATGCGTGGGATGC
GGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCAGATGGCGAAGGTA
GTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACTGCAAGACTATGAA
AAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCTCATTCATTGCCGG
GCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGGAACGACGATGCGA
CTGAGGTCAAGACCGAGAGCATGGAGTTCTAGACCTGCTGCTGCTCCGGG
ACCCCAGGTTGATACCGATACAATGCTTGCGTTCTATCAACGCCTCTTTC
CCTTCCGCTATCTATTCCAATGGTTGAACCATGGCATTGTTCCTTCCCCC
GACTTCGGAAACCGTGAATTCGCCCTTACCCTTCAAAACGATGCCTACCT
GCGATATCAGTCATATGCGACCGCGGATCTATGTTGATTGAAGGCGCTCA
TGCAACTCACTACAGCTTGAGCACTACGTCAATATTCGGAATGCCTCACT
CAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGATGAACTTCTA
CCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGGAGGCCAATGC
AGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGACGACGATGATG
AATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGCTTCCTCTGCT
CCGGATTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGGTTTGAAAT
CGGGCCTGTCTACAACACGAATCCGCGAGACAGGAAGACGCTCCGAGGTG
GCCAGATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCGACCTTACG
GATTACGATGACATCAGATCCTGTTGTGAGAAGGCAAACATTTGTAGCAA
GTGCTGGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACACGGCGCTAC
GCGAAGATTTCGGTTTCGAGCATATATTATGGGTCTATTCTGGTCGTCGT
GGTGCCCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTTCCAGATGA
TCGGAGAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGGAGGAAATT
CGAGCGGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCACACATGTCT
CGCAGCCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACGTTGGTGGA
CCAGGAAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCTTTCTTTGC
TGCCCGACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGGAGTCTTCG
CCCGACCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCCTTGGCCAA
GACAGGCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGATGCCAAGC
AAGACATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTGAAGTTAGC
AAAAAGATGATTCACTTGCTAAAGAGTCCATTTGTCATTCACCCTGGCAC
TGGTCGCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACAATTCGACC
CCCTCTCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCGATGCGTGG
GATGCGGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCAGATGGCGA
AGGTAGTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACTGCAAGACT
ATGAAAAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCTCATTCATT
GCCGGGCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGGAACGACGA
TGCGACTGAGGTCAAGACCGAGAGCATGGAGTTCTAGACCTGCTGCTGCT
CCGGGACCCCAGGTTGATACCGATACAATGCTTGCGTTCTATCAACGCCT
CTTTCCCTTCCGCTATCTATTCCAATGGTTGAACCATGGCATTGTTCCTT
CCCCCGACTTCGGAAACCGTGAATTCGCCCTTACCCTTCAAAACGATGCC
TACCTGCGATATCAGTCATATGCGACCGCGGATCTATGTTGATTGAAGGC
GCTCATGCAACTCACTACAGCTTGAGCACTACGTCAATATTCGGAATGCC
TCACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGATGAAC
TTCTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGGAGGCC
AATGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGACGACGA
TGATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGCTTCCT
CTGCTCCGGATTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGGTTT
GAAATCGGGCCTGTCTACAACACGAATCCGCGAGACAGGAAGACGCTCCG
AGGTGGCCAGATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCGACC
TTACGGATTACGATGACATCAGATCCTGTTGTGAGAAGGCAAACATTTGT
AGCAAGTGCTGGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACACGGC
GCTACGCGAAGATTTCGGTTTCGAGCATATATTATGGGTCTATTCTGGTC
GTCGTGGTGCCCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTTCCA
GATGATCGGAGAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGGAGG
AAATTCGAGCGGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCACACA
TGTCTCGCAGCCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACGTTG
GTGGACCAGGAAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCTTTC
TTTGCTGCCCGACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGGAGT
CTTCGCCCGACCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCCTTG
GCCAAGACAGGCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGATGC
CAAGCAAGACATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTGAAG
TTAGCAAAAAGATGATTCACTTGCTAAAGAGTCCATTTGTCATTCACCCT
GGCACTGGTCGCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACAATT
CGACCCCCTCTCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCGATG
CGTGGGATGCGGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCAGAT
GGCGAAGGTAGTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACTGCA
AGACTATGAAAAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCTCAT
TCATTGCCGGGCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGGAAC
GACGATGCGACTGAGGTCAAGACCGAGAGCATGGAGTTCTAGACCTGCTG
CTGCTCCGGGACCCCAGGTTGATACCGATACAATGCTTGCGTTCTATCAA
CGCCTCTTTCCCTTCCGCTATCTATTCCAATGGTTGAACCATGGCATTGT
TCCTTCCCCCGACTTCGGAAACCGTGAATTCGCCCTTACCCTTCAAAACG
ATGCCTACCTGCGATATCAGTCATATGCGACCGCGGATCTATGTTGATTG
AAGGCGCTCATGCAACTCACTACAGCTTGAGCACTACGTCAATATTCGGA
ATGCCTCACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGA
TGAACTTCTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGG
AGGCCAATGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGAC
GACGATGATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGC
TTCCTCTGCTCCGGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006269 | DNA replication, synthesis of RNA primer |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003896 | DNA primase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007515-T1.utr3p1 | KJC3_007515-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007515-T1.utr5p1 | KJC3_007515-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261ZI1 |
| DBxref | InterPro:IPR014052 |
| DBxref | InterPro:IPR002755 |
| DBxref | PFAM:PF01896 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2682083..2684045 - |
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