|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2690795..2692392- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007518-T2 ID=KJC3_007518-T2|Name=KJC3_007518-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1598bp|location=Sequence derived from alignment at ch5:2690795..2692392- (Aspergillus niger KJC3)
GGAATATCCACATTGCCCGTGCCCCTTCTTCCTCTTCTTCTCCCTTCTTG
GCTATTCTGTCTCTGGCCAGAAAGTGGGCCAGCTGCCGATCCAACCGATG
AGTGACCCATGGATTAGCAGTTGCCCCTCTGCAGTGGTCCCTGGTGTATA
AATTATAAAAGATTTGAGGTTGTCTCCTTATTAGTACTATTCCCTCAATT
GTATCTGTCCTACTCCATACTAGACGTACATCTGTCCGACCACTGACTCA
TTCGCCATGGCTCAAGATTACAAGTTTGAAGGATGGATGGGTCTCGATAA
GGACTCTGCCGACGGAAAGATGGTCTGGCAGGAGTTTGAGCCCAAGCCGT
GGGAGGAGACCGATGTTGACATCAAGATCACTCACTGCGGTATCTGCGGT
TCCGATTTGCACACTCTCCGCAGTGGCTGGGTAAGGCATCCATTACCATA
TTTCGGTTGATAGACCGTTTTCAAATCCTAGATACTAACCTCAACAGAGA
CCAACTCTGTACCCCTGCTGCGTGGGCCATGAAATCGTCGGCACTGCCGT
GCGTGTTGGATCCAAGGCTGTCGGCGGCATCAAGGTTGGTGACCGCGTGG
GTGTCGGCGCGCAGAGCGATTCCTGCCTTGGTCGTCTGGGAGACTGCCCC
GAATGTGCGATGGGTGATGAGCAGTACTGCTCGCACAAGATCGTCGGTAC
CTACAACAATGTCCACCTGAACGGCGGCAAGTCTTACGGTGGATATGCTT
TGTACAACCGCACTCCATCCCACTTCGTTGTCAAGATCCCCGACAGCATT
CCCTCGGCACAGGCCGCCCCTATGTTGTGCGGTGGTGTCACCCTGTTCAG
CCCCCTGAAGCACCACAACTGTGGCCCCGGCAAGCGCGTGGGTATCATTG
GTGTTGGCGGACTGGGTCACTTTGGTGTGCTTCTGGCCAAGGCCATGGGT
GCTGATAAGGTGGTTGCTATCTCCCGTAAGACTGGCAAGGCCAATGATGC
GCTGGCTATGGGTGCGGATCTCTATATTGCTACGGATGATGAGCCGGACT
GGGCTACCAAGTATGCCCGGTCTCTGGATTTGATTGTCTGCACTGTTTCT
TCGACCAAGGTATGTTCTGACCCCGTAGACCGTTCCTCAATATTGAGAGG
GGGCTCGAATACTAATGGGGGGAATAGATGCCCATGACCGAATACCTGGG
CCTGCTTGCGACGGGCGGCGCCCTGGTTCAGGTCGGACTTCCGGATGACG
GAGTTCTTCTGGCCCCTGTCGGCAAGCTGCAGCGTCGCCTAAAGGCTACC
AGCTCCTTTATCGGCAGTCCCAACGAGATCCGTGAGATGTTCCAGCTCGT
TGCTGAGAAGGGAGTCAAGGCCTGGATCGAAGAGATCCCGATGAAGGATG
CCAACCAGGCCATTGTGGATATGCACGCGGGCAAGGCGCGATACCGTTAC
GTGCTGGTGAATGAGCAGTGATGTGATGATTATGATTTACGATGTATGGA
GTTGGGTGATGTGAAGTGGAGTTAGTTGGAGAAGAGGACAGCGATGTGCA
TTAGAGATCATTAGAGATAGACAGAAATGATACCATTTTTCTTTCGAC back to topCoding sequence (CDS) from alignment at ch5:2690795..2692392- >KJC3_007518-T2 ID=KJC3_007518-T2|Name=KJC3_007518-T2|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch5:2690795..2692392- (Aspergillus niger KJC3)
AGACCAACTCTGTACCCCTGCTGCGTGGGCCATGAAATCGTCGGCACTGC
CGTGCGTGTTGGATCCAAGGCTGTCGGCGGCATCAAGGTTGGTGACCGCG
TGGGTGTCGGCGCGCAGAGCGATTCCTGCCTTGGTCGTCTGGGAGACTGC
CCCGAATGTGCGATGGGTGATGAGCAGTACTGCTCGCACAAGATCGTCGG
TACCTACAACAATGTCCACCTGAACGGCGGCAAGTCTTACGGTGGATATG
CTTTGTACAACCGCACTCCATCCCACTTCGTTGTCAAGATCCCCGACAGC
ATTCCCTCGGCACAGGCCGCCCCTATGTTGTGCGGTGGTGTCACCCTGTT
CAGCCCCCTGAAGCACCACAACTGTGGCCCCGGCAAGCGCGTGGGTATCA
TTGGTGTTGGCGGACTGGGTCACTTTGGTGTGCTTCTGGCCAAGGCCATG
GGTGCTGATAAGGTGGTTGCTATCTCCCGTAAGACTGGCAAGGCCAATGA
TGCGCTGGCTATGGGTGCGGATCTCTATATTGCTACGGATGATGAGCCGG
ACTGGGCTACCAAGTATGCCCGGTCTCTGGATTTGATTGTCTGCACTGTT
TCTTCGACCAAGGTATGTTCTGACCCCGTAGACCGTTCCTCAATATTGAG
AGGGGGCTCGAATACTAATGGGGGGAATAGATGCCCATGAATGGCTCAAG
ATTACAAGTTTGAAGGATGGATGGGTCTCGATAAGGACTCTGCCGACGGA
AAGATGGTCTGGCAGGAGTTTGAGCCCAAGCCGTGGGAGGAGACCGATGT
TGACATCAAGATCACTCACTGCGGTATCTGCGGTTCCGATTTGCACACTC
TCCGCAGTGGCTGGAGACCAACTCTGTACCCCTGCTGCGTGGGCCATGAA
ATCGTCGGCACTGCCGTGCGTGTTGGATCCAAGGCTGTCGGCGGCATCAA
GGTTGGTGACCGCGTGGGTGTCGGCGCGCAGAGCGATTCCTGCCTTGGTC
GTCTGGGAGACTGCCCCGAATGTGCGATGGGTGATGAGCAGTACTGCTCG
CACAAGATCGTCGGTACCTACAACAATGTCCACCTGAACGGCGGCAAGTC
TTACGGTGGATATGCTTTGTACAACCGCACTCCATCCCACTTCGTTGTCA
AGATCCCCGACAGCATTCCCTCGGCACAGGCCGCCCCTATGTTGTGCGGT
GGTGTCACCCTGTTCAGCCCCCTGAAGCACCACAACTGTGGCCCCGGCAA
GCGCGTGGGTATCATTGGTGTTGGCGGACTGGGTCACTTTGGTGTGCTTC
TGGCCAAGGCCATGGGTGCTGATAAGGTGGTTGCTATCTCCCGTAAGACT
GGCAAGGCCAATGATGCGCTGGCTATGGGTGCGGATCTCTATATTGCTAC
GGATGATGAGCCGGACTGGGCTACCAAGTATGCCCGGTCTCTGGATTTGA
TTGTCTGCACTGTTTCTTCGACCAAGGTATGTTCTGACCCCGTAGACCGT
TCCTCAATATTGAGAGGGGGCTCGAATACTAATGGGGGGAATAGATGCCC
ATGAATGGCTCAAGATTACAAGTTTGAAGGATGGATGGGTCTCGATAAGG
ACTCTGCCGACGGAAAGATGGTCTGGCAGGAGTTTGAGCCCAAGCCGTGG
GAGGAGACCGATGTTGACATCAAGATCACTCACTGCGGTATCTGCGGTTC
CGATTTGCACACTCTCCGCAGTGGCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007518-T2.utr3p1 | KJC3_007518-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007518-T2.utr5p1 | KJC3_007518-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002328 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR013149 |
| DBxref | PFAM:PF08240 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2690795..2692392 - |
|
